RNA–Protein interactions for RNA: ENST00000464812.1

NUDCD3-204, Transcript of NudC domain containing 3, humanhuman

TSL 5

Gene NUDCD3, Length 811 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-204ENST00000464812 TEX14Q8IWB6 1497 aa14.03□□□□□ -0.16
NUDCD3-204ENST00000464812 NCOA2Q15596 1464 aa14.02□□□□□ -0.16
NUDCD3-204ENST00000464812 PLEKHD1A6NEE1 506 aa14.02□□□□□ -0.17
NUDCD3-204ENST00000464812 APLP2Q06481 763 aa14.02□□□□□ -0.17
NUDCD3-204ENST00000464812 ARAP3Q8WWN8 1544 aa14.01□□□□□ -0.17
NUDCD3-204ENST00000464812 MYO5CQ9NQX4 1742 aa14□□□□□ -0.17
NUDCD3-204ENST00000464812 CDC42BPBQ9Y5S2 1711 aa14□□□□□ -0.17
NUDCD3-204ENST00000464812 ITSN2Q9NZM3 1697 aa14□□□□□ -0.17
NUDCD3-204ENST00000464812 PREX2Q70Z35 1606 aa14□□□□□ -0.17
NUDCD3-204ENST00000464812 PHLDB1Q86UU1 1377 aa13.98□□□□□ -0.17
NUDCD3-204ENST00000464812 NEO1Q92859 1461 aa13.98□□□□□ -0.17
NUDCD3-204ENST00000464812 PLCH2O75038 1416 aa13.98□□□□□ -0.17
NUDCD3-204ENST00000464812 RICTORQ6R327 1708 aa13.96□□□□□ -0.17
NUDCD3-204ENST00000464812 CDK11AQ9UQ88 783 aaPredicted RBP13.96□□□□□ -0.17
NUDCD3-204ENST00000464812 FANCAO15360 1455 aa13.95□□□□□ -0.18
NUDCD3-204ENST00000464812 RAPGEF3O95398 923 aa13.94□□□□□ -0.18
NUDCD3-204ENST00000464812 AKNAQ7Z591 1439 aa13.94□□□□□ -0.18
NUDCD3-204ENST00000464812 SIGLEC1Q9BZZ2 1709 aa13.94□□□□□ -0.18
NUDCD3-204ENST00000464812 ARHGEF12Q9NZN5 1544 aa13.94□□□□□ -0.18
NUDCD3-204ENST00000464812 GPATCH8Q9UKJ3 1502 aaKnown RBP13.93□□□□□ -0.18
NUDCD3-204ENST00000464812 MYOM3Q5VTT5 1437 aa13.92□□□□□ -0.18
NUDCD3-204ENST00000464812 PTPN23Q9H3S7 1636 aa13.91□□□□□ -0.18
NUDCD3-204ENST00000464812 SAMD9LQ8IVG5 1584 aa13.91□□□□□ -0.18
NUDCD3-204ENST00000464812 KDM4FA0A1W2PPD8 638 aa13.9□□□□□ -0.18
NUDCD3-204ENST00000464812 FGD6Q6ZV73 1430 aa13.9□□□□□ -0.19
NUDCD3-204ENST00000464812 RRBP1Q9P2E9 1410 aaKnown RBP13.89□□□□□ -0.19
NUDCD3-204ENST00000464812 CFAP74Q9C0B2 1584 aa13.88□□□□□ -0.19
NUDCD3-204ENST00000464812 CCNB3Q8WWL7 1395 aa13.88□□□□□ -0.19
NUDCD3-204ENST00000464812 ZMYM4Q5VZL5 1548 aa13.88□□□□□ -0.19
NUDCD3-204ENST00000464812 ADGRL1O94910 1474 aa13.87□□□□□ -0.19
NUDCD3-204ENST00000464812 ABCC1P33527 1531 aa13.87□□□□□ -0.19
NUDCD3-204ENST00000464812 ARHGAP5Q13017 1502 aa13.87□□□□□ -0.19
NUDCD3-204ENST00000464812 POGZQ7Z3K3 1410 aa13.87□□□□□ -0.19
NUDCD3-204ENST00000464812 SCAPERQ9BY12 1400 aa13.87□□□□□ -0.19
NUDCD3-204ENST00000464812 YEATS2Q9ULM3 1422 aa13.87□□□□□ -0.19
NUDCD3-204ENST00000464812 DENND4BO75064 1496 aaPredicted RBP13.87□□□□□ -0.19
NUDCD3-204ENST00000464812 CAMSAP2Q08AD1 1489 aa13.87□□□□□ -0.19
NUDCD3-204ENST00000464812 TCOF1Q13428 1488 aaKnown RBP13.87□□□□□ -0.19
NUDCD3-204ENST00000464812 CROCC2H7BZ55 1655 aa13.85□□□□□ -0.19
NUDCD3-204ENST00000464812 TRAPPC8Q9Y2L5 1435 aa13.85□□□□□ -0.19
NUDCD3-204ENST00000464812 ARHGEF40Q8TER5 1519 aa13.85□□□□□ -0.19
NUDCD3-204ENST00000464812 KDM5CP41229 1560 aa13.84□□□□□ -0.19
NUDCD3-204ENST00000464812 MIA2Q96PC5 1412 aa13.84□□□□□ -0.19
NUDCD3-204ENST00000464812 SYCP2Q9BX26 1530 aa13.83□□□□□ -0.2
NUDCD3-204ENST00000464812 EFCAB2Q5VUJ9 269 aa13.82□□□□□ -0.2
NUDCD3-204ENST00000464812 ZNF644Q9H582 1327 aaPredicted RBP13.82□□□□□ -0.2
NUDCD3-204ENST00000464812 DNMT1P26358 1616 aaKnown RBP13.82□□□□□ -0.2
NUDCD3-204ENST00000464812 AFAP1Q8N556 730 aa13.81□□□□□ -0.2
NUDCD3-204ENST00000464812 MBD5Q9P267 1494 aa13.79□□□□□ -0.2
NUDCD3-204ENST00000464812 ARHGEF5Q12774 1597 aa13.79□□□□□ -0.2
NUDCD3-204ENST00000464812 ABCA6Q8N139 1617 aa13.79□□□□□ -0.2
NUDCD3-204ENST00000464812 KIDINS220Q9ULH0 1771 aa13.78□□□□□ -0.2
NUDCD3-204ENST00000464812 CFDP1Q9UEE9 299 aaPredicted RBP13.78□□□□□ -0.2
NUDCD3-204ENST00000464812 ZFYVE16Q7Z3T8 1539 aa13.78□□□□□ -0.2
NUDCD3-204ENST00000464812 DIP2CQ9Y2E4 1556 aa13.78□□□□□ -0.2
NUDCD3-204ENST00000464812 ADAMTSL3P82987 1691 aa13.77□□□□□ -0.21
NUDCD3-204ENST00000464812 ADGBQ8N7X0 1667 aa13.76□□□□□ -0.21
NUDCD3-204ENST00000464812 ZNF518AQ6AHZ1 1483 aa13.76□□□□□ -0.21
NUDCD3-204ENST00000464812 BCORL1Q5H9F3 1711 aa13.76□□□□□ -0.21
NUDCD3-204ENST00000464812 HECW2Q9P2P5 1572 aa13.75□□□□□ -0.21
NUDCD3-204ENST00000464812 PTPRKQ15262 1439 aa13.75□□□□□ -0.21
NUDCD3-204ENST00000464812 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.75□□□□□ -0.21
NUDCD3-204ENST00000464812 HNRNPMP52272 730 aaKnown RBP eCLIP13.75□□□□□ -0.212e-6■■■□□ 19
NUDCD3-204ENST00000464812 ZNF777Q9ULD5 760 aaPredicted RBP13.75□□□□□ -0.21
NUDCD3-204ENST00000464812 MAGI2Q86UL8 1455 aa13.74□□□□□ -0.21
NUDCD3-204ENST00000464812 MLH3Q9UHC1 1453 aa13.74□□□□□ -0.21
NUDCD3-204ENST00000464812 DAPK1P53355 1430 aa13.74□□□□□ -0.21
NUDCD3-204ENST00000464812 INO80Q9ULG1 1556 aaPredicted RBP13.74□□□□□ -0.21
NUDCD3-204ENST00000464812 PLEKHH2Q8IVE3 1493 aa13.74□□□□□ -0.21
NUDCD3-204ENST00000464812 KIAA1107Q9UPP5 1409 aa13.73□□□□□ -0.21
NUDCD3-204ENST00000464812 FAM50AQ14320 339 aaKnown RBP13.73□□□□□ -0.21
NUDCD3-204ENST00000464812 ABCC5O15440 1437 aa13.73□□□□□ -0.21
NUDCD3-204ENST00000464812 MAST1Q9Y2H9 1570 aa13.72□□□□□ -0.21
NUDCD3-204ENST00000464812 TRIM26Q12899 539 aaPredicted RBP13.72□□□□□ -0.21
NUDCD3-204ENST00000464812 CCDC141Q6ZP82 1450 aa13.72□□□□□ -0.21
NUDCD3-204ENST00000464812 MADDQ8WXG6 1647 aa13.72□□□□□ -0.21
NUDCD3-204ENST00000464812 ATP10AO60312 1499 aa13.71□□□□□ -0.21
NUDCD3-204ENST00000464812 GCC2Q8IWJ2 1684 aa13.71□□□□□ -0.21
NUDCD3-204ENST00000464812 SHANK2Q9UPX8 1470 aa13.7□□□□□ -0.22
NUDCD3-204ENST00000464812 REREQ9P2R6 1566 aa13.7□□□□□ -0.22
NUDCD3-204ENST00000464812 ATP7AQ04656 1500 aa13.68□□□□□ -0.22
NUDCD3-204ENST00000464812 PLXNC1O60486 1568 aa13.67□□□□□ -0.22
NUDCD3-204ENST00000464812 C9orf84Q5VXU9 1444 aa13.67□□□□□ -0.22
NUDCD3-204ENST00000464812 ITGAEP38570 1179 aa13.66□□□□□ -0.22
NUDCD3-204ENST00000464812 ADGRL2O95490 1459 aa13.66□□□□□ -0.22
NUDCD3-204ENST00000464812 PCGF6Q9BYE7 350 aa13.65□□□□□ -0.22
NUDCD3-204ENST00000464812 RIMS1Q86UR5 1692 aaKnown RBP13.65□□□□□ -0.22
NUDCD3-204ENST00000464812 PTPRMP28827 1452 aa13.64□□□□□ -0.23
NUDCD3-204ENST00000464812 AGLP35573 1532 aa13.64□□□□□ -0.23
NUDCD3-204ENST00000464812 SPAG9O60271 1321 aaKnown RBP13.62□□□□□ -0.23
NUDCD3-204ENST00000464812 FER1L4A9Z1Z3 1794 aa13.6□□□□□ -0.23
NUDCD3-204ENST00000464812 HFM1A2PYH4 1435 aa13.6□□□□□ -0.23
NUDCD3-204ENST00000464812 NAIPQ13075 1403 aa13.6□□□□□ -0.23
NUDCD3-204ENST00000464812 CHIC2Q9UKJ5 165 aa13.6□□□□□ -0.23
NUDCD3-204ENST00000464812 ROCK1Q13464 1354 aa13.59□□□□□ -0.23
NUDCD3-204ENST00000464812 RTEL1-TNFRSF6BF6WH68 1400 aa13.59□□□□□ -0.23
NUDCD3-204ENST00000464812 NCOA1Q15788 1441 aa13.59□□□□□ -0.23
NUDCD3-204ENST00000464812 MLECQ14165 292 aa13.59□□□□□ -0.23
NUDCD3-204ENST00000464812 A2MP01023 1474 aa13.59□□□□□ -0.23
NUDCD3-204ENST00000464812 ARID4BQ4LE39 1312 aaPredicted RBP13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms