RNA–Protein interactions for RNA: ENST00000464611.1

ACTB-208, Transcript of actin beta, humanhuman

TSL 5

Gene ACTB, Length 715 nt, Biotype processed transcript, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-208ENST00000464611 PHLDB1Q86UU1 1377 aa12.3□□□□□ -0.44
ACTB-208ENST00000464611 ZCCHC11Q5TAX3 1644 aaKnown RBP12.29□□□□□ -0.44
ACTB-208ENST00000464611 NUP153P49790 1475 aaKnown RBP12.28□□□□□ -0.44
ACTB-208ENST00000464611 KDM5BQ9UGL1 1544 aa12.28□□□□□ -0.44
ACTB-208ENST00000464611 NEUROD1Q13562 356 aa12.27□□□□□ -0.45
ACTB-208ENST00000464611 MAPKBP1O60336 1514 aa12.27□□□□□ -0.45
ACTB-208ENST00000464611 MTUS2Q5JR59 1369 aa12.26□□□□□ -0.45
ACTB-208ENST00000464611 FAM50AQ14320 339 aaKnown RBP12.25□□□□□ -0.45
ACTB-208ENST00000464611 EPRSP07814 1512 aaKnown RBP12.25□□□□□ -0.45
ACTB-208ENST00000464611 NPM1P06748 294 aaKnown RBP eCLIP12.24□□□□□ -0.45
ACTB-208ENST00000464611 FGD6Q6ZV73 1430 aa12.24□□□□□ -0.45
ACTB-208ENST00000464611 LRRIQ1Q96JM4 1722 aa12.24□□□□□ -0.45
ACTB-208ENST00000464611 EHBP1L1Q8N3D4 1523 aa12.23□□□□□ -0.45
ACTB-208ENST00000464611 MIER1Q8N108 512 aa12.23□□□□□ -0.45
ACTB-208ENST00000464611 ATP1B4Q9UN42 357 aaPredicted RBP12.23□□□□□ -0.45
ACTB-208ENST00000464611 CDK13Q14004 1512 aaKnown RBP12.22□□□□□ -0.45
ACTB-208ENST00000464611 SUPT6HQ7KZ85 1726 aaKnown RBP12.22□□□□□ -0.45
ACTB-208ENST00000464611 MYOM3Q5VTT5 1437 aa12.21□□□□□ -0.45
ACTB-208ENST00000464611 ITGAEP38570 1179 aa12.21□□□□□ -0.45
ACTB-208ENST00000464611 ATP10BO94823 1461 aa12.21□□□□□ -0.46
ACTB-208ENST00000464611 WDR7Q9Y4E6 1490 aa12.2□□□□□ -0.46
ACTB-208ENST00000464611 HFM1A2PYH4 1435 aa12.2□□□□□ -0.46
ACTB-208ENST00000464611 GTF3C3Q9Y5Q9 886 aa12.19□□□□□ -0.46
ACTB-208ENST00000464611 ABCB7O75027 752 aa12.18□□□□□ -0.46
ACTB-208ENST00000464611 NPM3O75607 178 aaKnown RBP12.18□□□□□ -0.46
ACTB-208ENST00000464611 ASXL2Q76L83 1435 aa12.18□□□□□ -0.46
ACTB-208ENST00000464611 AKNAQ7Z591 1439 aa12.18□□□□□ -0.46
ACTB-208ENST00000464611 MIA2Q96PC5 1412 aa12.18□□□□□ -0.46
ACTB-208ENST00000464611 KIF14Q15058 1648 aa12.18□□□□□ -0.46
ACTB-208ENST00000464611 NCOA2Q15596 1464 aa12.17□□□□□ -0.46
ACTB-208ENST00000464611 CDK11AQ9UQ88 783 aaPredicted RBP12.17□□□□□ -0.46
ACTB-208ENST00000464611 DIP2BQ9P265 1576 aa12.16□□□□□ -0.46
ACTB-208ENST00000464611 TCOF1Q13428 1488 aaKnown RBP12.15□□□□□ -0.46
ACTB-208ENST00000464611 TROQ12816 1431 aaPredicted RBP12.14□□□□□ -0.47
ACTB-208ENST00000464611 ARID3CA6NKF2 412 aa12.14□□□□□ -0.47
ACTB-208ENST00000464611 GLI2P10070 1586 aa12.13□□□□□ -0.47
ACTB-208ENST00000464611 PPP1R15AO75807 674 aaPredicted RBP12.13□□□□□ -0.47
ACTB-208ENST00000464611 TRHP20396 242 aaPredicted RBP12.13□□□□□ -0.47
ACTB-208ENST00000464611 ABCC10Q5T3U5 1492 aa12.13□□□□□ -0.47
ACTB-208ENST00000464611 PLEKHD1A6NEE1 506 aa12.12□□□□□ -0.47
ACTB-208ENST00000464611 CHRDL2Q6WN34 429 aa12.12□□□□□ -0.47
ACTB-208ENST00000464611 MAGI3Q5TCQ9 1506 aa12.11□□□□□ -0.47
ACTB-208ENST00000464611 ABCA9Q8IUA7 1624 aa12.11□□□□□ -0.47
ACTB-208ENST00000464611 KIF13AQ9H1H9 1805 aa12.11□□□□□ -0.47
ACTB-208ENST00000464611 PTPN23Q9H3S7 1636 aa12.11□□□□□ -0.47
ACTB-208ENST00000464611 SP7Q8TDD2 431 aaPredicted RBP12.1□□□□□ -0.47
ACTB-208ENST00000464611 NAIPQ13075 1403 aa12.1□□□□□ -0.47
ACTB-208ENST00000464611 ITSN2Q9NZM3 1697 aa12.1□□□□□ -0.47
ACTB-208ENST00000464611 MAP3K4Q9Y6R4 1608 aa12.09□□□□□ -0.47
ACTB-208ENST00000464611 MYO5CQ9NQX4 1742 aa12.08□□□□□ -0.47
ACTB-208ENST00000464611 TONSLQ96HA7 1378 aa12.08□□□□□ -0.48
ACTB-208ENST00000464611 ZNF219Q9P2Y4 722 aaPredicted RBP12.08□□□□□ -0.48
ACTB-208ENST00000464611 TTC37Q6PGP7 1564 aa12.08□□□□□ -0.48
ACTB-208ENST00000464611 CFAP74Q9C0B2 1584 aa12.08□□□□□ -0.48
ACTB-208ENST00000464611 ROCK1Q13464 1354 aa12.07□□□□□ -0.48
ACTB-208ENST00000464611 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.07□□□□□ -0.48
ACTB-208ENST00000464611 RBM42Q9BTD8 480 aaKnown RBP12.07□□□□□ -0.48
ACTB-208ENST00000464611 PREX2Q70Z35 1606 aa12.06□□□□□ -0.48
ACTB-208ENST00000464611 CCER2I3L3R5 266 aa12.05□□□□□ -0.48
ACTB-208ENST00000464611 YTHDC1Q96MU7 727 aaKnown RBP12.05□□□□□ -0.48
ACTB-208ENST00000464611 ARAP3Q8WWN8 1544 aa12.05□□□□□ -0.48
ACTB-208ENST00000464611 GCC2Q8IWJ2 1684 aa12.04□□□□□ -0.48
ACTB-208ENST00000464611 TEX14Q8IWB6 1497 aa12.04□□□□□ -0.48
ACTB-208ENST00000464611 SIN3AQ96ST3 1273 aa12.04□□□□□ -0.48
ACTB-208ENST00000464611 CDC42BPAQ5VT25 1732 aa12.03□□□□□ -0.48
ACTB-208ENST00000464611 PTPRKQ15262 1439 aa12.03□□□□□ -0.48
ACTB-208ENST00000464611 FAM69CQ0P6D2 419 aa12.02□□□□□ -0.49
ACTB-208ENST00000464611 KCNH8Q96L42 1107 aa12.02□□□□□ -0.49
ACTB-208ENST00000464611 CD109Q6YHK3 1445 aa12.01□□□□□ -0.49
ACTB-208ENST00000464611 ARHGAP5Q13017 1502 aa12□□□□□ -0.49
ACTB-208ENST00000464611 PPRC1Q5VV67 1664 aaKnown RBP12□□□□□ -0.49
ACTB-208ENST00000464611 TSPOAP1O95153 1857 aa12□□□□□ -0.49
ACTB-208ENST00000464611 CDC42BPBQ9Y5S2 1711 aa11.99□□□□□ -0.49
ACTB-208ENST00000464611 NEO1Q92859 1461 aa11.98□□□□□ -0.49
ACTB-208ENST00000464611 PLCH2O75038 1416 aa11.98□□□□□ -0.49
ACTB-208ENST00000464611 ANP32CO43423 234 aa11.98□□□□□ -0.49
ACTB-208ENST00000464611 GPATCH8Q9UKJ3 1502 aaKnown RBP11.97□□□□□ -0.49
ACTB-208ENST00000464611 FANCAO15360 1455 aa11.97□□□□□ -0.49
ACTB-208ENST00000464611 DNMT1P26358 1616 aaKnown RBP11.95□□□□□ -0.5
ACTB-208ENST00000464611 ABCC1P33527 1531 aa11.95□□□□□ -0.5
ACTB-208ENST00000464611 PLEKHH2Q8IVE3 1493 aa11.95□□□□□ -0.5
ACTB-208ENST00000464611 DAPK1P53355 1430 aa11.94□□□□□ -0.5
ACTB-208ENST00000464611 DDX10Q13206 875 aaKnown RBP11.94□□□□□ -0.5
ACTB-208ENST00000464611 MPHOSPH9Q99550 1183 aa11.94□□□□□ -0.5
ACTB-208ENST00000464611 SAMD9LQ8IVG5 1584 aa11.93□□□□□ -0.5
ACTB-208ENST00000464611 TRIM52Q96A61 297 aa11.93□□□□□ -0.5
ACTB-208ENST00000464611 ADGRL1O94910 1474 aa11.92□□□□□ -0.5
ACTB-208ENST00000464611 CAMSAP2Q08AD1 1489 aa11.92□□□□□ -0.5
ACTB-208ENST00000464611 KDM6BO15054 1643 aa11.91□□□□□ -0.5
ACTB-208ENST00000464611 MYT1Q01538 1121 aa11.91□□□□□ -0.5
ACTB-208ENST00000464611 EFCAB2Q5VUJ9 269 aa11.91□□□□□ -0.5
ACTB-208ENST00000464611 RRP7BPQ9NSQ0 103 aa11.91□□□□□ -0.5
ACTB-208ENST00000464611 CFDP1Q9UEE9 299 aaPredicted RBP11.91□□□□□ -0.5
ACTB-208ENST00000464611 ABCC5O15440 1437 aa11.9□□□□□ -0.5
ACTB-208ENST00000464611 EIF4G2P78344 907 aaKnown RBP eCLIP11.9□□□□□ -0.5
ACTB-208ENST00000464611 SYCP2Q9BX26 1530 aa11.9□□□□□ -0.5
ACTB-208ENST00000464611 ADGRL2O95490 1459 aa11.89□□□□□ -0.51
ACTB-208ENST00000464611 RSPH4AQ5TD94 716 aa11.89□□□□□ -0.51
ACTB-208ENST00000464611 ARHGEF5Q12774 1597 aa11.88□□□□□ -0.51
ACTB-208ENST00000464611 KIAA1107Q9UPP5 1409 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms