RNA–Protein interactions for RNA: ENST00000464572.5

SUPT20H-204, Transcript of SPT20 homolog, SAGA complex component, humanhuman

TSL 1 (best)

Gene SUPT20H, Length 2,948 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT20H-204ENST00000464572 PREX2Q70Z35 1606 aa19.49■□□□□ 0.71
SUPT20H-204ENST00000464572 CDC42BPBQ9Y5S2 1711 aa19.48■□□□□ 0.71
SUPT20H-204ENST00000464572 ARHGAP5Q13017 1502 aa19.47■□□□□ 0.71
SUPT20H-204ENST00000464572 ZNF644Q9H582 1327 aaPredicted RBP19.47■□□□□ 0.71
SUPT20H-204ENST00000464572 PTPN23Q9H3S7 1636 aa19.46■□□□□ 0.71
SUPT20H-204ENST00000464572 EFCAB2Q5VUJ9 269 aa19.45■□□□□ 0.7
SUPT20H-204ENST00000464572 KIF13AQ9H1H9 1805 aa19.44■□□□□ 0.7
SUPT20H-204ENST00000464572 MAP3K4Q9Y6R4 1608 aa19.44■□□□□ 0.7
SUPT20H-204ENST00000464572 ARAP3Q8WWN8 1544 aa19.43■□□□□ 0.7
SUPT20H-204ENST00000464572 TRHP20396 242 aaPredicted RBP19.43■□□□□ 0.7
SUPT20H-204ENST00000464572 TCOF1Q13428 1488 aaKnown RBP19.42■□□□□ 0.7
SUPT20H-204ENST00000464572 FANCAO15360 1455 aa19.41■□□□□ 0.7
SUPT20H-204ENST00000464572 CAMSAP2Q08AD1 1489 aa19.41■□□□□ 0.7
SUPT20H-204ENST00000464572 PCGF6Q9BYE7 350 aa19.41■□□□□ 0.7
SUPT20H-204ENST00000464572 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.4■□□□□ 0.7
SUPT20H-204ENST00000464572 ITGAEP38570 1179 aa19.4■□□□□ 0.7
SUPT20H-204ENST00000464572 SAMD9LQ8IVG5 1584 aa19.39■□□□□ 0.69
SUPT20H-204ENST00000464572 TSPOAP1O95153 1857 aa19.38■□□□□ 0.69
SUPT20H-204ENST00000464572 HNRNPMP52272 730 aaKnown RBP eCLIP19.37■□□□□ 0.69
SUPT20H-204ENST00000464572 AKNAQ7Z591 1439 aa19.34■□□□□ 0.69
SUPT20H-204ENST00000464572 PLEKHH2Q8IVE3 1493 aa19.34■□□□□ 0.69
SUPT20H-204ENST00000464572 SYCP2Q9BX26 1530 aa19.33■□□□□ 0.68
SUPT20H-204ENST00000464572 PPRC1Q5VV67 1664 aaKnown RBP19.33■□□□□ 0.68
SUPT20H-204ENST00000464572 KIAA1107Q9UPP5 1409 aa19.33■□□□□ 0.68
SUPT20H-204ENST00000464572 CFAP74Q9C0B2 1584 aa19.32■□□□□ 0.68
SUPT20H-204ENST00000464572 ADGRL1O94910 1474 aa19.32■□□□□ 0.68
SUPT20H-204ENST00000464572 NEO1Q92859 1461 aa19.32■□□□□ 0.68
SUPT20H-204ENST00000464572 ABCC1P33527 1531 aa19.32■□□□□ 0.68
SUPT20H-204ENST00000464572 ARHGEF12Q9NZN5 1544 aa19.32■□□□□ 0.68
SUPT20H-204ENST00000464572 TEX14Q8IWB6 1497 aa19.31■□□□□ 0.68
SUPT20H-204ENST00000464572 MBD5Q9P267 1494 aa19.31■□□□□ 0.68
SUPT20H-204ENST00000464572 SCAPERQ9BY12 1400 aa19.31■□□□□ 0.68
SUPT20H-204ENST00000464572 ABCC5O15440 1437 aa19.3■□□□□ 0.68
SUPT20H-204ENST00000464572 DAPK1P53355 1430 aa19.3■□□□□ 0.68
SUPT20H-204ENST00000464572 DNMT1P26358 1616 aaKnown RBP19.29■□□□□ 0.68
SUPT20H-204ENST00000464572 PTPRKQ15262 1439 aa19.29■□□□□ 0.68
SUPT20H-204ENST00000464572 RSPH4AQ5TD94 716 aa19.29■□□□□ 0.68
SUPT20H-204ENST00000464572 CHIC2Q9UKJ5 165 aa19.28■□□□□ 0.68
SUPT20H-204ENST00000464572 ARHGEF5Q12774 1597 aa19.27■□□□□ 0.68
SUPT20H-204ENST00000464572 TRAPPC8Q9Y2L5 1435 aa19.27■□□□□ 0.68
SUPT20H-204ENST00000464572 AFAP1Q8N556 730 aa19.26■□□□□ 0.67
SUPT20H-204ENST00000464572 CCDC141Q6ZP82 1450 aa19.26■□□□□ 0.67
SUPT20H-204ENST00000464572 TSPY4P0CV99 314 aa19.26■□□□□ 0.67
SUPT20H-204ENST00000464572 TSPY10P0CW01 314 aa19.26■□□□□ 0.67
SUPT20H-204ENST00000464572 RAPGEF3O95398 923 aa19.22■□□□□ 0.67
SUPT20H-204ENST00000464572 DENND4BO75064 1496 aaPredicted RBP19.22■□□□□ 0.67
SUPT20H-204ENST00000464572 CROCC2H7BZ55 1655 aa19.21■□□□□ 0.67
SUPT20H-204ENST00000464572 C9orf84Q5VXU9 1444 aa19.21■□□□□ 0.67
SUPT20H-204ENST00000464572 POGZQ7Z3K3 1410 aa19.2■□□□□ 0.66
SUPT20H-204ENST00000464572 ZNF518AQ6AHZ1 1483 aa19.2■□□□□ 0.66
SUPT20H-204ENST00000464572 SHANK2Q9UPX8 1470 aa19.2■□□□□ 0.66
SUPT20H-204ENST00000464572 RRP7BPQ9NSQ0 103 aa19.19■□□□□ 0.66
SUPT20H-204ENST00000464572 SPAG9O60271 1321 aaKnown RBP19.19■□□□□ 0.66
SUPT20H-204ENST00000464572 MYT1LQ9UL68 1186 aa19.17■□□□□ 0.66
SUPT20H-204ENST00000464572 COL17A1Q9UMD9 1497 aaPredicted RBP19.16■□□□□ 0.66
SUPT20H-204ENST00000464572 ROCK1Q13464 1354 aa19.15■□□□□ 0.66
SUPT20H-204ENST00000464572 ANKRD30AQ9BXX3 1397 aa19.15■□□□□ 0.66
SUPT20H-204ENST00000464572 NCOA1Q15788 1441 aa19.15■□□□□ 0.66
SUPT20H-204ENST00000464572 RICTORQ6R327 1708 aa19.15■□□□□ 0.66
SUPT20H-204ENST00000464572 MAST1Q9Y2H9 1570 aa19.15■□□□□ 0.66
SUPT20H-204ENST00000464572 ADGRL2O95490 1459 aa19.14■□□□□ 0.65
SUPT20H-204ENST00000464572 KDM5CP41229 1560 aa19.14■□□□□ 0.65
SUPT20H-204ENST00000464572 ADGBQ8N7X0 1667 aa19.14■□□□□ 0.65
SUPT20H-204ENST00000464572 RTEL1-TNFRSF6BF6WH68 1400 aa19.13■□□□□ 0.65
SUPT20H-204ENST00000464572 FRMPD1Q5SYB0 1578 aa19.13■□□□□ 0.65
SUPT20H-204ENST00000464572 HFM1A2PYH4 1435 aa19.12■□□□□ 0.65
SUPT20H-204ENST00000464572 ZFYVE16Q7Z3T8 1539 aa19.11■□□□□ 0.65
SUPT20H-204ENST00000464572 NAIPQ13075 1403 aa19.11■□□□□ 0.65
SUPT20H-204ENST00000464572 ATP7AQ04656 1500 aa19.11■□□□□ 0.65
SUPT20H-204ENST00000464572 INO80Q9ULG1 1556 aaPredicted RBP19.1■□□□□ 0.65
SUPT20H-204ENST00000464572 SETD5Q9C0A6 1442 aa19.1■□□□□ 0.65
SUPT20H-204ENST00000464572 KIF15Q9NS87 1388 aa19.1■□□□□ 0.65
SUPT20H-204ENST00000464572 MLH3Q9UHC1 1453 aa19.1■□□□□ 0.65
SUPT20H-204ENST00000464572 HECW2Q9P2P5 1572 aa19.09■□□□□ 0.65
SUPT20H-204ENST00000464572 KIDINS220Q9ULH0 1771 aa19.09■□□□□ 0.65
SUPT20H-204ENST00000464572 PLXNC1O60486 1568 aa19.07■□□□□ 0.64
SUPT20H-204ENST00000464572 KDM6BO15054 1643 aa19.07■□□□□ 0.64
SUPT20H-204ENST00000464572 RAB3GAP2Q9H2M9 1393 aa19.07■□□□□ 0.64
SUPT20H-204ENST00000464572 ZMYM4Q5VZL5 1548 aa19.06■□□□□ 0.64
SUPT20H-204ENST00000464572 GCC2Q8IWJ2 1684 aa19.06■□□□□ 0.64
SUPT20H-204ENST00000464572 ANKRD50Q9ULJ7 1429 aa19.04■□□□□ 0.64
SUPT20H-204ENST00000464572 YEATS2Q9ULM3 1422 aa19.04■□□□□ 0.64
SUPT20H-204ENST00000464572 MAGI2Q86UL8 1455 aa19.03■□□□□ 0.64
SUPT20H-204ENST00000464572 DUOX2Q9NRD8 1548 aa19.02■□□□□ 0.64
SUPT20H-204ENST00000464572 ABCA6Q8N139 1617 aa19.01■□□□□ 0.63
SUPT20H-204ENST00000464572 DIP2CQ9Y2E4 1556 aa19■□□□□ 0.63
SUPT20H-204ENST00000464572 DHX29Q7Z478 1369 aaKnown RBP18.99■□□□□ 0.63
SUPT20H-204ENST00000464572 A2MP01023 1474 aa18.99■□□□□ 0.63
SUPT20H-204ENST00000464572 HRCP23327 699 aa18.98■□□□□ 0.63
SUPT20H-204ENST00000464572 ERBINQ96RT1 1412 aa18.97■□□□□ 0.63
SUPT20H-204ENST00000464572 ATP10AO60312 1499 aa18.96■□□□□ 0.63
SUPT20H-204ENST00000464572 TRIM52Q96A61 297 aa18.95■□□□□ 0.62
SUPT20H-204ENST00000464572 ARHGEF40Q8TER5 1519 aa18.94■□□□□ 0.62
SUPT20H-204ENST00000464572 KIF3BO15066 747 aa18.94■□□□□ 0.62
SUPT20H-204ENST00000464572 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.9■□□□□ 0.62
SUPT20H-204ENST00000464572 ACIN1Q9UKV3 1341 aaKnown RBP18.89■□□□□ 0.61
SUPT20H-204ENST00000464572 EIF2AK4Q9P2K8 1649 aaKnown RBP18.89■□□□□ 0.61
SUPT20H-204ENST00000464572 NUP155O75694 1391 aa18.88■□□□□ 0.61
SUPT20H-204ENST00000464572 REREQ9P2R6 1566 aa18.88■□□□□ 0.61
SUPT20H-204ENST00000464572 GGT6Q6P531 493 aa18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms