RNA–Protein interactions for RNA: ENST00000464429.1

CACNA1D-204, Transcript of calcium voltage-gated channel subunit alpha1 D, humanhuman

TSL 3

Gene CACNA1D, Length 493 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1D-204ENST00000464429 PPRC1Q5VV67 1664 aaKnown RBP13.85□□□□□ -0.19
CACNA1D-204ENST00000464429 MTUS2Q5JR59 1369 aa13.84□□□□□ -0.19
CACNA1D-204ENST00000464429 ARAP3Q8WWN8 1544 aa13.83□□□□□ -0.2
CACNA1D-204ENST00000464429 CD109Q6YHK3 1445 aa13.82□□□□□ -0.2
CACNA1D-204ENST00000464429 LRRC9Q6ZRR7 1453 aa13.82□□□□□ -0.2
CACNA1D-204ENST00000464429 SUPT6HQ7KZ85 1726 aaKnown RBP13.82□□□□□ -0.2
CACNA1D-204ENST00000464429 MYO5CQ9NQX4 1742 aa13.81□□□□□ -0.2
CACNA1D-204ENST00000464429 CFAP74Q9C0B2 1584 aa13.81□□□□□ -0.2
CACNA1D-204ENST00000464429 KCNH8Q96L42 1107 aa13.81□□□□□ -0.2
CACNA1D-204ENST00000464429 PREX2Q70Z35 1606 aa13.8□□□□□ -0.2
CACNA1D-204ENST00000464429 APLP2Q06481 763 aa13.8□□□□□ -0.2
CACNA1D-204ENST00000464429 TSPOAP1O95153 1857 aa13.8□□□□□ -0.2
CACNA1D-204ENST00000464429 ITSN2Q9NZM3 1697 aa13.79□□□□□ -0.2
CACNA1D-204ENST00000464429 NEO1Q92859 1461 aa13.77□□□□□ -0.21
CACNA1D-204ENST00000464429 CDC42BPAQ5VT25 1732 aa13.76□□□□□ -0.21
CACNA1D-204ENST00000464429 NCOA2Q15596 1464 aa13.76□□□□□ -0.21
CACNA1D-204ENST00000464429 PLCH2O75038 1416 aa13.76□□□□□ -0.21
CACNA1D-204ENST00000464429 KCNA4P22459 653 aa13.75□□□□□ -0.21
CACNA1D-204ENST00000464429 FANCAO15360 1455 aa13.74□□□□□ -0.21
CACNA1D-204ENST00000464429 PHLDB1Q86UU1 1377 aa13.74□□□□□ -0.21
CACNA1D-204ENST00000464429 ARHGAP5Q13017 1502 aa13.74□□□□□ -0.21
CACNA1D-204ENST00000464429 KDM6BO15054 1643 aa13.73□□□□□ -0.21
CACNA1D-204ENST00000464429 CDC42BPBQ9Y5S2 1711 aa13.73□□□□□ -0.21
CACNA1D-204ENST00000464429 CCNB3Q8WWL7 1395 aa13.72□□□□□ -0.21
CACNA1D-204ENST00000464429 CACNB1Q02641 598 aaPredicted RBP13.72□□□□□ -0.21
CACNA1D-204ENST00000464429 GPATCH8Q9UKJ3 1502 aaKnown RBP13.72□□□□□ -0.21
CACNA1D-204ENST00000464429 KANK4Q5T7N3 995 aaPredicted RBP13.7□□□□□ -0.22
CACNA1D-204ENST00000464429 ABCC1P33527 1531 aa13.69□□□□□ -0.22
CACNA1D-204ENST00000464429 RNF39Q9H2S5 420 aa13.69□□□□□ -0.22
CACNA1D-204ENST00000464429 ADGRL1O94910 1474 aa13.68□□□□□ -0.22
CACNA1D-204ENST00000464429 MYOM3Q5VTT5 1437 aa13.68□□□□□ -0.22
CACNA1D-204ENST00000464429 AKNAQ7Z591 1439 aa13.68□□□□□ -0.22
CACNA1D-204ENST00000464429 PLEKHH2Q8IVE3 1493 aa13.67□□□□□ -0.22
CACNA1D-204ENST00000464429 SAMD9LQ8IVG5 1584 aa13.67□□□□□ -0.22
CACNA1D-204ENST00000464429 EFCAB2Q5VUJ9 269 aa13.67□□□□□ -0.22
CACNA1D-204ENST00000464429 MIA2Q96PC5 1412 aa13.65□□□□□ -0.22
CACNA1D-204ENST00000464429 DENND4BO75064 1496 aaPredicted RBP13.65□□□□□ -0.22
CACNA1D-204ENST00000464429 FRMPD1Q5SYB0 1578 aa13.65□□□□□ -0.22
CACNA1D-204ENST00000464429 POGZQ7Z3K3 1410 aa13.64□□□□□ -0.23
CACNA1D-204ENST00000464429 RICTORQ6R327 1708 aa13.64□□□□□ -0.23
CACNA1D-204ENST00000464429 ZMYM4Q5VZL5 1548 aa13.64□□□□□ -0.23
CACNA1D-204ENST00000464429 SYCP2Q9BX26 1530 aa13.64□□□□□ -0.23
CACNA1D-204ENST00000464429 KIAA1107Q9UPP5 1409 aa13.64□□□□□ -0.23
CACNA1D-204ENST00000464429 CAMSAP2Q08AD1 1489 aa13.63□□□□□ -0.23
CACNA1D-204ENST00000464429 COL17A1Q9UMD9 1497 aaPredicted RBP13.63□□□□□ -0.23
CACNA1D-204ENST00000464429 CFDP1Q9UEE9 299 aaPredicted RBP13.63□□□□□ -0.23
CACNA1D-204ENST00000464429 KDM5CP41229 1560 aa13.62□□□□□ -0.23
CACNA1D-204ENST00000464429 ZNF518AQ6AHZ1 1483 aa13.62□□□□□ -0.23
CACNA1D-204ENST00000464429 FGD6Q6ZV73 1430 aa13.62□□□□□ -0.23
CACNA1D-204ENST00000464429 SCAPERQ9BY12 1400 aa13.62□□□□□ -0.23
CACNA1D-204ENST00000464429 PTPN23Q9H3S7 1636 aa13.61□□□□□ -0.23
CACNA1D-204ENST00000464429 TCOF1Q13428 1488 aaKnown RBP13.6□□□□□ -0.23
CACNA1D-204ENST00000464429 ARHGEF40Q8TER5 1519 aa13.59□□□□□ -0.23
CACNA1D-204ENST00000464429 ARHGEF5Q12774 1597 aa13.59□□□□□ -0.23
CACNA1D-204ENST00000464429 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.59□□□□□ -0.23
CACNA1D-204ENST00000464429 ARHGEF12Q9NZN5 1544 aa13.59□□□□□ -0.23
CACNA1D-204ENST00000464429 HECW2Q9P2P5 1572 aa13.58□□□□□ -0.23
CACNA1D-204ENST00000464429 MAGI2Q86UL8 1455 aa13.58□□□□□ -0.24
CACNA1D-204ENST00000464429 CCDC141Q6ZP82 1450 aa13.57□□□□□ -0.24
CACNA1D-204ENST00000464429 MBD5Q9P267 1494 aa13.56□□□□□ -0.24
CACNA1D-204ENST00000464429 C1QBPQ07021 282 aaKnown RBP13.56□□□□□ -0.24
CACNA1D-204ENST00000464429 ZNF777Q9ULD5 760 aaPredicted RBP13.56□□□□□ -0.24
CACNA1D-204ENST00000464429 TRAPPC8Q9Y2L5 1435 aa13.56□□□□□ -0.24
CACNA1D-204ENST00000464429 ZFYVE16Q7Z3T8 1539 aa13.55□□□□□ -0.24
CACNA1D-204ENST00000464429 INO80Q9ULG1 1556 aaPredicted RBP13.55□□□□□ -0.24
CACNA1D-204ENST00000464429 CROCC2H7BZ55 1655 aa13.54□□□□□ -0.24
CACNA1D-204ENST00000464429 MLH3Q9UHC1 1453 aa13.54□□□□□ -0.24
CACNA1D-204ENST00000464429 SHANK2Q9UPX8 1470 aa13.54□□□□□ -0.24
CACNA1D-204ENST00000464429 DNMT1P26358 1616 aaKnown RBP13.53□□□□□ -0.24
CACNA1D-204ENST00000464429 RAPGEF3O95398 923 aa13.53□□□□□ -0.24
CACNA1D-204ENST00000464429 RRBP1Q9P2E9 1410 aaKnown RBP13.53□□□□□ -0.24
CACNA1D-204ENST00000464429 MAST1Q9Y2H9 1570 aa13.53□□□□□ -0.24
CACNA1D-204ENST00000464429 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.52□□□□□ -0.25
CACNA1D-204ENST00000464429 ATP7AQ04656 1500 aa13.52□□□□□ -0.25
CACNA1D-204ENST00000464429 ZNF644Q9H582 1327 aaPredicted RBP13.51□□□□□ -0.25
CACNA1D-204ENST00000464429 RSPH4AQ5TD94 716 aa13.51□□□□□ -0.25
CACNA1D-204ENST00000464429 KIDINS220Q9ULH0 1771 aa13.5□□□□□ -0.25
CACNA1D-204ENST00000464429 ABCA6Q8N139 1617 aa13.5□□□□□ -0.25
CACNA1D-204ENST00000464429 REREQ9P2R6 1566 aa13.5□□□□□ -0.25
CACNA1D-204ENST00000464429 DIP2CQ9Y2E4 1556 aa13.5□□□□□ -0.25
CACNA1D-204ENST00000464429 RTEL1-TNFRSF6BF6WH68 1400 aa13.49□□□□□ -0.25
CACNA1D-204ENST00000464429 DAPK1P53355 1430 aa13.49□□□□□ -0.25
CACNA1D-204ENST00000464429 PLXNC1O60486 1568 aa13.49□□□□□ -0.25
CACNA1D-204ENST00000464429 YEATS2Q9ULM3 1422 aa13.48□□□□□ -0.25
CACNA1D-204ENST00000464429 HNRNPMP52272 730 aaKnown RBP eCLIP13.48□□□□□ -0.25
CACNA1D-204ENST00000464429 PPARGC1BQ86YN6 1023 aaKnown RBP13.48□□□□□ -0.25
CACNA1D-204ENST00000464429 AFAP1Q8N556 730 aa13.48□□□□□ -0.25
CACNA1D-204ENST00000464429 C9orf84Q5VXU9 1444 aa13.47□□□□□ -0.25
CACNA1D-204ENST00000464429 SPAG9O60271 1321 aaKnown RBP13.47□□□□□ -0.25
CACNA1D-204ENST00000464429 ADGBQ8N7X0 1667 aa13.47□□□□□ -0.25
CACNA1D-204ENST00000464429 ABCC5O15440 1437 aa13.46□□□□□ -0.26
CACNA1D-204ENST00000464429 ATP10AO60312 1499 aa13.45□□□□□ -0.26
CACNA1D-204ENST00000464429 ADGRL2O95490 1459 aa13.44□□□□□ -0.26
CACNA1D-204ENST00000464429 TSPY4P0CV99 314 aa13.43□□□□□ -0.26
CACNA1D-204ENST00000464429 TSPY10P0CW01 314 aa13.43□□□□□ -0.26
CACNA1D-204ENST00000464429 FAM50AQ14320 339 aaKnown RBP13.43□□□□□ -0.26
CACNA1D-204ENST00000464429 AGLP35573 1532 aa13.43□□□□□ -0.26
CACNA1D-204ENST00000464429 MYT1LQ9UL68 1186 aa13.41□□□□□ -0.26
CACNA1D-204ENST00000464429 A2MP01023 1474 aa13.41□□□□□ -0.26
CACNA1D-204ENST00000464429 EIF2AK4Q9P2K8 1649 aaKnown RBP13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms