RNA–Protein interactions for RNA: ENST00000464291.1

GLI3-205, Transcript of GLI family zinc finger 3, humanhuman

TSL 4

Gene GLI3, Length 553 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GLI3-205ENST00000464291 CD109Q6YHK3 1445 aa13.11□□□□□ -0.31
GLI3-205ENST00000464291 KDM4FA0A1W2PPD8 638 aa13.09□□□□□ -0.31
GLI3-205ENST00000464291 ATP1B4Q9UN42 357 aaPredicted RBP13.09□□□□□ -0.31
GLI3-205ENST00000464291 LHX8Q68G74 356 aa13.07□□□□□ -0.32
GLI3-205ENST00000464291 CFAP43Q8NDM7 1665 aa13.06□□□□□ -0.32
GLI3-205ENST00000464291 ATP10BO94823 1461 aa13.06□□□□□ -0.32
GLI3-205ENST00000464291 RAPGEF6Q8TEU7 1601 aa13.05□□□□□ -0.32
GLI3-205ENST00000464291 COL17A1Q9UMD9 1497 aaPredicted RBP13.04□□□□□ -0.32
GLI3-205ENST00000464291 PLEKHD1A6NEE1 506 aa13.04□□□□□ -0.32
GLI3-205ENST00000464291 FHOD3Q2V2M9 1422 aa13.04□□□□□ -0.32
GLI3-205ENST00000464291 C19orf67A6NJJ6 358 aa13.03□□□□□ -0.32
GLI3-205ENST00000464291 SAMD9Q5K651 1589 aa13.03□□□□□ -0.32
GLI3-205ENST00000464291 MAGI3Q5TCQ9 1506 aa13.01□□□□□ -0.33
GLI3-205ENST00000464291 KIF21BO75037 1637 aa13□□□□□ -0.33
GLI3-205ENST00000464291 ADGRL1O94910 1474 aa12.99□□□□□ -0.33
GLI3-205ENST00000464291 GABBR2O75899 941 aa12.98□□□□□ -0.33
GLI3-205ENST00000464291 PRKAR2AP13861 404 aaKnown RBP12.98□□□□□ -0.33
GLI3-205ENST00000464291 RAPGEF3O95398 923 aa12.96□□□□□ -0.33
GLI3-205ENST00000464291 ARID4BQ4LE39 1312 aaPredicted RBP12.95□□□□□ -0.34
GLI3-205ENST00000464291 EFCAB5A4FU69 1503 aa12.95□□□□□ -0.34
GLI3-205ENST00000464291 NUP153P49790 1475 aaKnown RBP12.95□□□□□ -0.34
GLI3-205ENST00000464291 ABCA9Q8IUA7 1624 aa12.95□□□□□ -0.34
GLI3-205ENST00000464291 PHLDB1Q86UU1 1377 aa12.94□□□□□ -0.34
GLI3-205ENST00000464291 CDK11AQ9UQ88 783 aaPredicted RBP12.92□□□□□ -0.34
GLI3-205ENST00000464291 FOXD4L1Q9NU39 408 aa12.91□□□□□ -0.34
GLI3-205ENST00000464291 ARAP3Q8WWN8 1544 aa12.91□□□□□ -0.34
GLI3-205ENST00000464291 SPDYE2BA6NHP3 402 aa12.9□□□□□ -0.34
GLI3-205ENST00000464291 SPDYE6P0CI01 402 aa12.9□□□□□ -0.34
GLI3-205ENST00000464291 SPDYE2Q495Y8 402 aa12.9□□□□□ -0.34
GLI3-205ENST00000464291 FMN1Q68DA7 1419 aa12.89□□□□□ -0.35
GLI3-205ENST00000464291 NEO1Q92859 1461 aa12.89□□□□□ -0.35
GLI3-205ENST00000464291 MYT1LQ9UL68 1186 aa12.88□□□□□ -0.35
GLI3-205ENST00000464291 CDK13Q14004 1512 aaKnown RBP12.88□□□□□ -0.35
GLI3-205ENST00000464291 AKNAQ7Z591 1439 aa12.86□□□□□ -0.35
GLI3-205ENST00000464291 FANCAO15360 1455 aa12.85□□□□□ -0.35
GLI3-205ENST00000464291 DENND4BO75064 1496 aaPredicted RBP12.85□□□□□ -0.35
GLI3-205ENST00000464291 HECW1Q76N89 1606 aa12.85□□□□□ -0.35
GLI3-205ENST00000464291 ARHGAP35Q9NRY4 1499 aa12.85□□□□□ -0.35
GLI3-205ENST00000464291 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.84□□□□□ -0.35
GLI3-205ENST00000464291 CFAP74Q9C0B2 1584 aa12.84□□□□□ -0.35
GLI3-205ENST00000464291 EFCAB2Q5VUJ9 269 aa12.83□□□□□ -0.36
GLI3-205ENST00000464291 SPDYE1Q8NFV5 336 aaPredicted RBP12.83□□□□□ -0.36
GLI3-205ENST00000464291 TTC37Q6PGP7 1564 aa12.81□□□□□ -0.36
GLI3-205ENST00000464291 CLIP1P30622 1438 aa12.81□□□□□ -0.36
GLI3-205ENST00000464291 MLECQ14165 292 aa12.81□□□□□ -0.36
GLI3-205ENST00000464291 SCAPERQ9BY12 1400 aa12.79□□□□□ -0.36
GLI3-205ENST00000464291 MYO5CQ9NQX4 1742 aa12.79□□□□□ -0.36
GLI3-205ENST00000464291 CLEC11AQ9Y240 323 aa12.79□□□□□ -0.36
GLI3-205ENST00000464291 HECW2Q9P2P5 1572 aa12.78□□□□□ -0.36
GLI3-205ENST00000464291 PLSCR2Q9NRY7 297 aa12.78□□□□□ -0.36
GLI3-205ENST00000464291 RICTORQ6R327 1708 aa12.78□□□□□ -0.36
GLI3-205ENST00000464291 PLCH2O75038 1416 aa12.78□□□□□ -0.36
GLI3-205ENST00000464291 POGZQ7Z3K3 1410 aa12.77□□□□□ -0.37
GLI3-205ENST00000464291 FRMPD1Q5SYB0 1578 aa12.77□□□□□ -0.37
GLI3-205ENST00000464291 KIF14Q15058 1648 aa12.77□□□□□ -0.37
GLI3-205ENST00000464291 TROQ12816 1431 aaPredicted RBP12.76□□□□□ -0.37
GLI3-205ENST00000464291 ARHGAP5Q13017 1502 aa12.76□□□□□ -0.37
GLI3-205ENST00000464291 POTEIP0CG38 1075 aa12.75□□□□□ -0.37
GLI3-205ENST00000464291 BCORL1Q5H9F3 1711 aa12.74□□□□□ -0.37
GLI3-205ENST00000464291 ZFYVE16Q7Z3T8 1539 aa12.74□□□□□ -0.37
GLI3-205ENST00000464291 PTPRMP28827 1452 aa12.74□□□□□ -0.37
GLI3-205ENST00000464291 ZNF777Q9ULD5 760 aaPredicted RBP12.74□□□□□ -0.37
GLI3-205ENST00000464291 LRRIQ1Q96JM4 1722 aa12.74□□□□□ -0.37
GLI3-205ENST00000464291 ADAMTSL3P82987 1691 aa12.73□□□□□ -0.37
GLI3-205ENST00000464291 ARHGEF40Q8TER5 1519 aa12.73□□□□□ -0.37
GLI3-205ENST00000464291 AFAP1Q8N556 730 aa12.73□□□□□ -0.37
GLI3-205ENST00000464291 CASKIN1Q8WXD9 1431 aa12.72□□□□□ -0.37
GLI3-205ENST00000464291 YEATS2Q9ULM3 1422 aa12.72□□□□□ -0.37
GLI3-205ENST00000464291 RIMS1Q86UR5 1692 aaKnown RBP12.72□□□□□ -0.37
GLI3-205ENST00000464291 MADDQ8WXG6 1647 aa12.72□□□□□ -0.37
GLI3-205ENST00000464291 PCF11O94913 1555 aaKnown RBP12.72□□□□□ -0.37
GLI3-205ENST00000464291 CCDC18Q5T9S5 1454 aa12.72□□□□□ -0.37
GLI3-205ENST00000464291 MAGI2Q86UL8 1455 aa12.71□□□□□ -0.38
GLI3-205ENST00000464291 ESF1Q9H501 851 aaKnown RBP12.7□□□□□ -0.38
GLI3-205ENST00000464291 ZMYM4Q5VZL5 1548 aa12.69□□□□□ -0.38
GLI3-205ENST00000464291 ILDR1Q86SU0 546 aaPredicted RBP12.69□□□□□ -0.38
GLI3-205ENST00000464291 SSUH2Q9Y2M2 353 aa12.69□□□□□ -0.38
GLI3-205ENST00000464291 ATP10AO60312 1499 aa12.68□□□□□ -0.38
GLI3-205ENST00000464291 CDC42BPBQ9Y5S2 1711 aa12.68□□□□□ -0.38
GLI3-205ENST00000464291 ZNF518AQ6AHZ1 1483 aa12.67□□□□□ -0.38
GLI3-205ENST00000464291 FYCO1Q9BQS8 1478 aa12.67□□□□□ -0.38
GLI3-205ENST00000464291 CHADLQ6NUI6 762 aa12.67□□□□□ -0.38
GLI3-205ENST00000464291 MTUS2Q5JR59 1369 aa12.67□□□□□ -0.38
GLI3-205ENST00000464291 FER1L4A9Z1Z3 1794 aa12.66□□□□□ -0.38
GLI3-205ENST00000464291 C9orf84Q5VXU9 1444 aa12.65□□□□□ -0.38
GLI3-205ENST00000464291 HSPA2P54652 639 aa12.65□□□□□ -0.38
GLI3-205ENST00000464291 SLC4A1APQ9BWU0 796 aaKnown RBP12.65□□□□□ -0.38
GLI3-205ENST00000464291 CFDP1Q9UEE9 299 aaPredicted RBP12.65□□□□□ -0.38
GLI3-205ENST00000464291 CEBPAP49715 358 aaPredicted RBP12.64□□□□□ -0.39
GLI3-205ENST00000464291 HNRNPMP52272 730 aaKnown RBP eCLIP12.64□□□□□ -0.39
GLI3-205ENST00000464291 PREX2Q70Z35 1606 aa12.63□□□□□ -0.39
GLI3-205ENST00000464291 CDC42BPAQ5VT25 1732 aa12.63□□□□□ -0.39
GLI3-205ENST00000464291 CCNB3Q8WWL7 1395 aa12.63□□□□□ -0.39
GLI3-205ENST00000464291 SIGLEC1Q9BZZ2 1709 aa12.62□□□□□ -0.39
GLI3-205ENST00000464291 LOC105371045A0A1W2PR82 267 aa12.61□□□□□ -0.39
GLI3-205ENST00000464291 ATXN8OSP0DMR3 200 aa12.61□□□□□ -0.39
GLI3-205ENST00000464291 TRAPPC8Q9Y2L5 1435 aa12.61□□□□□ -0.39
GLI3-205ENST00000464291 SPAG9O60271 1321 aaKnown RBP12.61□□□□□ -0.39
GLI3-205ENST00000464291 ITSN2Q9NZM3 1697 aa12.59□□□□□ -0.39
GLI3-205ENST00000464291 MKRN4PQ13434 485 aaPredicted RBP12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms