RNA–Protein interactions for RNA: ENST00000463705.5

CHRNA4-202, Transcript of cholinergic receptor nicotinic alpha 4 subunit, humanhuman

TSL 1 (best)

Gene CHRNA4, Length 5,201 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4-202ENST00000463705 ROCK2O75116 1388 aaKnown RBP17.38■□□□□ 0.37
CHRNA4-202ENST00000463705 U2SURPO15042 1029 aaKnown RBP17.38■□□□□ 0.37
CHRNA4-202ENST00000463705 MORC1Q86VD1 984 aa17.38■□□□□ 0.37
CHRNA4-202ENST00000463705 SRPK2P78362 688 aaKnown RBP17.38■□□□□ 0.37
CHRNA4-202ENST00000463705 RALBP1Q15311 655 aa17.35■□□□□ 0.37
CHRNA4-202ENST00000463705 GGT6Q6P531 493 aa17.35■□□□□ 0.37
CHRNA4-202ENST00000463705 HDGFL2Q7Z4V5 671 aaPredicted RBP17.34■□□□□ 0.37
CHRNA4-202ENST00000463705 FRAT1Q92837 279 aaPredicted RBP17.34■□□□□ 0.37
CHRNA4-202ENST00000463705 ARXQ96QS3 562 aa17.32■□□□□ 0.36
CHRNA4-202ENST00000463705 LMOD2Q6P5Q4 547 aa17.31■□□□□ 0.36
CHRNA4-202ENST00000463705 B4GALNT3Q6L9W6 998 aa17.31■□□□□ 0.36
CHRNA4-202ENST00000463705 MLECQ14165 292 aa17.31■□□□□ 0.36
CHRNA4-202ENST00000463705 L3MBTL2Q969R5 705 aa17.3■□□□□ 0.36
CHRNA4-202ENST00000463705 JPH4Q96JJ6 628 aa17.3■□□□□ 0.36
CHRNA4-202ENST00000463705 ERICH6BQ5W0A0 696 aa17.29■□□□□ 0.36
CHRNA4-202ENST00000463705 SPAG9O60271 1321 aaKnown RBP17.28■□□□□ 0.36
CHRNA4-202ENST00000463705 HNRNPMP52272 730 aaKnown RBP eCLIP17.28■□□□□ 0.36
CHRNA4-202ENST00000463705 RGS3P49796 1198 aa17.28■□□□□ 0.36
CHRNA4-202ENST00000463705 DHX57Q6P158 1386 aaKnown RBP17.27■□□□□ 0.36
CHRNA4-202ENST00000463705 CALD1Q05682 793 aaKnown RBP17.27■□□□□ 0.35
CHRNA4-202ENST00000463705 CFAP44Q96MT7 982 aa17.27■□□□□ 0.35
CHRNA4-202ENST00000463705 SAFB2Q14151 953 aaKnown RBP eCLIP17.25■□□□□ 0.35
CHRNA4-202ENST00000463705 KIF3BO15066 747 aa17.24■□□□□ 0.35
CHRNA4-202ENST00000463705 FGD5Q6ZNL6 1462 aa17.23■□□□□ 0.35
CHRNA4-202ENST00000463705 OS9Q13438 667 aaPredicted RBP17.22■□□□□ 0.35
CHRNA4-202ENST00000463705 TRIM44Q96DX7 344 aaPredicted RBP17.22■□□□□ 0.35
CHRNA4-202ENST00000463705 IGF1RP08069 1367 aa17.22■□□□□ 0.35
CHRNA4-202ENST00000463705 UACAQ9BZF9 1416 aa17.21■□□□□ 0.35
CHRNA4-202ENST00000463705 RTF1Q92541 710 aaKnown RBP17.21■□□□□ 0.35
CHRNA4-202ENST00000463705 STK26Q9P289 416 aa17.21■□□□□ 0.35
CHRNA4-202ENST00000463705 IPO8O15397 1037 aaKnown RBP17.21■□□□□ 0.35
CHRNA4-202ENST00000463705 NCAPD3P42695 1498 aa17.21■□□□□ 0.35
CHRNA4-202ENST00000463705 GAPVD1Q14C86 1478 aa17.21■□□□□ 0.35
CHRNA4-202ENST00000463705 GLIPR1L2Q4G1C9 344 aa17.2■□□□□ 0.34
CHRNA4-202ENST00000463705 ZRSR1Q15695 479 aaKnown RBP17.2■□□□□ 0.34
CHRNA4-202ENST00000463705 CDK11BP21127 795 aaKnown RBP17.2■□□□□ 0.34
CHRNA4-202ENST00000463705 PTPRGP23470 1445 aa17.2■□□□□ 0.34
CHRNA4-202ENST00000463705 PHLDB1Q86UU1 1377 aa17.19■□□□□ 0.34
CHRNA4-202ENST00000463705 TERF2IPQ9NYB0 399 aa17.18■□□□□ 0.34
CHRNA4-202ENST00000463705 CUX1P39880 1505 aa17.18■□□□□ 0.34
CHRNA4-202ENST00000463705 CHMP4AQ9BY43 222 aa17.17■□□□□ 0.34
CHRNA4-202ENST00000463705 CCDC144AA2RUR9 1427 aa17.17■□□□□ 0.34
CHRNA4-202ENST00000463705 NOP58Q9Y2X3 529 aaKnown RBP17.17■□□□□ 0.34
CHRNA4-202ENST00000463705 WASHC2CQ9Y4E1 1318 aa17.16■□□□□ 0.34
CHRNA4-202ENST00000463705 HSP90AB1P08238 724 aaKnown RBP17.15■□□□□ 0.34
CHRNA4-202ENST00000463705 RCAN3Q9UKA8 241 aa17.14■□□□□ 0.33
CHRNA4-202ENST00000463705 U2AF1L5P0DN76 240 aaPredicted RBP17.13■□□□□ 0.33
CHRNA4-202ENST00000463705 U2AF1Q01081 240 aaKnown RBP eCLIP17.13■□□□□ 0.33
CHRNA4-202ENST00000463705 MCCP23508 829 aa17.13■□□□□ 0.33
CHRNA4-202ENST00000463705 KIF15Q9NS87 1388 aa17.13■□□□□ 0.33
CHRNA4-202ENST00000463705 NLRP13Q86W25 1043 aa17.13■□□□□ 0.33
CHRNA4-202ENST00000463705 EID1Q9Y6B2 187 aa17.12■□□□□ 0.33
CHRNA4-202ENST00000463705 SOX12O15370 315 aa17.12■□□□□ 0.33
CHRNA4-202ENST00000463705 PDE3BQ13370 1112 aa17.12■□□□□ 0.33
CHRNA4-202ENST00000463705 HSCBQ8IWL3 235 aa17.12■□□□□ 0.33
CHRNA4-202ENST00000463705 RAD54L2Q9Y4B4 1467 aa17.11■□□□□ 0.33
CHRNA4-202ENST00000463705 MYOM3Q5VTT5 1437 aa17.1■□□□□ 0.33
CHRNA4-202ENST00000463705 KCNJ4P48050 445 aa17.1■□□□□ 0.33
CHRNA4-202ENST00000463705 NPHP1O15259 732 aa17.1■□□□□ 0.33
CHRNA4-202ENST00000463705 PTMAP06454 111 aaKnown RBP17.09■□□□□ 0.33
CHRNA4-202ENST00000463705 RWDD1Q9H446 243 aaPredicted RBP17.08■□□□□ 0.33
CHRNA4-202ENST00000463705 FGD1P98174 961 aa17.08■□□□□ 0.32
CHRNA4-202ENST00000463705 RBM19Q9Y4C8 960 aaKnown RBP17.07■□□□□ 0.32
CHRNA4-202ENST00000463705 KIF21BO75037 1637 aa17.07■□□□□ 0.32
CHRNA4-202ENST00000463705 ERICH3Q5RHP9 1530 aa17.07■□□□□ 0.32
CHRNA4-202ENST00000463705 LMOD3Q0VAK6 560 aa17.06■□□□□ 0.32
CHRNA4-202ENST00000463705 ST20-MTHFSA0A0A6YYL1 179 aa17.06■□□□□ 0.32
CHRNA4-202ENST00000463705 OSCARQ8IYS5 282 aa17.05■□□□□ 0.32
CHRNA4-202ENST00000463705 MYBBP1AQ9BQG0 1328 aaKnown RBP17.05■□□□□ 0.32
CHRNA4-202ENST00000463705 GOLGA2Q08379 1002 aa17.05■□□□□ 0.32
CHRNA4-202ENST00000463705 PMFBP1Q8TBY8 1022 aa17.05■□□□□ 0.32
CHRNA4-202ENST00000463705 FGD6Q6ZV73 1430 aa17.04■□□□□ 0.32
CHRNA4-202ENST00000463705 PAK3O75914 559 aaPredicted RBP17.04■□□□□ 0.32
CHRNA4-202ENST00000463705 TCERG1O14776 1098 aaKnown RBP17.04■□□□□ 0.32
CHRNA4-202ENST00000463705 HDAC5Q9UQL6 1122 aa17.03■□□□□ 0.32
CHRNA4-202ENST00000463705 CASKIN1Q8WXD9 1431 aa17.02■□□□□ 0.32
CHRNA4-202ENST00000463705 FYCO1Q9BQS8 1478 aa17.02■□□□□ 0.31
CHRNA4-202ENST00000463705 VGFO15240 615 aaPredicted RBP17.02■□□□□ 0.31
CHRNA4-202ENST00000463705 GOLGA6L6A8MZA4 724 aa17.01■□□□□ 0.31
CHRNA4-202ENST00000463705 ITPRIPQ8IWB1 547 aa17.01■□□□□ 0.31
CHRNA4-202ENST00000463705 STK31Q9BXU1 1019 aa17■□□□□ 0.31
CHRNA4-202ENST00000463705 GRIN2BQ13224 1484 aa16.99■□□□□ 0.31
CHRNA4-202ENST00000463705 LRRC9Q6ZRR7 1453 aa16.99■□□□□ 0.31
CHRNA4-202ENST00000463705 CSB-PGBD3P0DP91 1061 aa16.99■□□□□ 0.31
CHRNA4-202ENST00000463705 STAC3Q96MF2 364 aa16.99■□□□□ 0.31
CHRNA4-202ENST00000463705 PTMSP20962 102 aa16.99■□□□□ 0.31
CHRNA4-202ENST00000463705 NUTM2DQ5VT03 806 aaPredicted RBP16.99■□□□□ 0.31
CHRNA4-202ENST00000463705 PRKRIP1Q9H875 184 aaPredicted RBP16.99■□□□□ 0.31
CHRNA4-202ENST00000463705 CFTRP13569 1480 aa16.99■□□□□ 0.31
CHRNA4-202ENST00000463705 USP47Q96K76 1375 aa16.98■□□□□ 0.31
CHRNA4-202ENST00000463705 PANK3Q9H999 370 aa16.98■□□□□ 0.31
CHRNA4-202ENST00000463705 TRAK1Q9UPV9 953 aa16.98■□□□□ 0.31
CHRNA4-202ENST00000463705 EVC2Q86UK5 1308 aa16.97■□□□□ 0.31
CHRNA4-202ENST00000463705 CENPJQ9HC77 1338 aaPredicted RBP16.97■□□□□ 0.31
CHRNA4-202ENST00000463705 SMC4Q9NTJ3 1288 aa16.97■□□□□ 0.31
CHRNA4-202ENST00000463705 NGDNQ8NEJ9 315 aaKnown RBP16.96■□□□□ 0.31
CHRNA4-202ENST00000463705 CCDC146Q8IYE0 955 aa16.96■□□□□ 0.31
CHRNA4-202ENST00000463705 HMGXB3Q12766 1538 aa16.96■□□□□ 0.31
CHRNA4-202ENST00000463705 HMMRO75330 724 aa16.96■□□□□ 0.31
CHRNA4-202ENST00000463705 KIAA1211Q6ZU35 1233 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms