RNA–Protein interactions for RNA: ENST00000463539.5

CCDC78-206, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 1,831 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-206ENST00000463539 PREX2Q70Z35 1606 aa28.37■■■□□ 2.13
CCDC78-206ENST00000463539 SETD5Q9C0A6 1442 aa28.37■■■□□ 2.13
CCDC78-206ENST00000463539 CYB5RLQ6IPT4 315 aa28.36■■■□□ 2.13
CCDC78-206ENST00000463539 DAPK1P53355 1430 aa28.34■■■□□ 2.13
CCDC78-206ENST00000463539 RAB3GAP2Q9H2M9 1393 aa28.33■■■□□ 2.13
CCDC78-206ENST00000463539 DNMT1P26358 1616 aaKnown RBP28.33■■■□□ 2.13
CCDC78-206ENST00000463539 ABCC5O15440 1437 aa28.31■■■□□ 2.12
CCDC78-206ENST00000463539 ARHGAP5Q13017 1502 aa28.31■■■□□ 2.12
CCDC78-206ENST00000463539 HFM1A2PYH4 1435 aa28.3■■■□□ 2.12
CCDC78-206ENST00000463539 MYO5CQ9NQX4 1742 aa28.3■■■□□ 2.12
CCDC78-206ENST00000463539 ZEB1P37275 1124 aaPredicted RBP28.29■■■□□ 2.12
CCDC78-206ENST00000463539 CDC42BPBQ9Y5S2 1711 aa28.29■■■□□ 2.12
CCDC78-206ENST00000463539 PLCH2O75038 1416 aa28.28■■■□□ 2.12
CCDC78-206ENST00000463539 CHIC2Q9UKJ5 165 aa28.27■■■□□ 2.12
CCDC78-206ENST00000463539 AKNAQ7Z591 1439 aa28.26■■■□□ 2.11
CCDC78-206ENST00000463539 SAMD9LQ8IVG5 1584 aa28.24■■■□□ 2.11
CCDC78-206ENST00000463539 NAIPQ13075 1403 aa28.24■■■□□ 2.11
CCDC78-206ENST00000463539 ABCA9Q8IUA7 1624 aa28.22■■■□□ 2.11
CCDC78-206ENST00000463539 ROCK1Q13464 1354 aa28.22■■■□□ 2.11
CCDC78-206ENST00000463539 ARAP3Q8WWN8 1544 aa28.21■■■□□ 2.11
CCDC78-206ENST00000463539 EFCAB2Q5VUJ9 269 aa28.19■■■□□ 2.1
CCDC78-206ENST00000463539 RRP7BPQ9NSQ0 103 aa28.19■■■□□ 2.1
CCDC78-206ENST00000463539 MAPKBP1O60336 1514 aa28.19■■■□□ 2.1
CCDC78-206ENST00000463539 DHX57Q6P158 1386 aaKnown RBP28.19■■■□□ 2.1
CCDC78-206ENST00000463539 PLEKHH2Q8IVE3 1493 aa28.18■■■□□ 2.1
CCDC78-206ENST00000463539 ARHGEF5Q12774 1597 aa28.18■■■□□ 2.1
CCDC78-206ENST00000463539 MBD5Q9P267 1494 aa28.18■■■□□ 2.1
CCDC78-206ENST00000463539 CROCC2H7BZ55 1655 aa28.17■■■□□ 2.1
CCDC78-206ENST00000463539 SHANK2Q9UPX8 1470 aa28.17■■■□□ 2.1
CCDC78-206ENST00000463539 HNRNPMP52272 730 aaKnown RBP eCLIP28.16■■■□□ 2.1
CCDC78-206ENST00000463539 GCC2Q8IWJ2 1684 aa28.15■■■□□ 2.1
CCDC78-206ENST00000463539 SYCP2Q9BX26 1530 aa28.15■■■□□ 2.1
CCDC78-206ENST00000463539 KIAA1107Q9UPP5 1409 aa28.15■■■□□ 2.1
CCDC78-206ENST00000463539 CCDC141Q6ZP82 1450 aa28.14■■■□□ 2.1
CCDC78-206ENST00000463539 RSPH4AQ5TD94 716 aa28.13■■■□□ 2.09
CCDC78-206ENST00000463539 ADGRL2O95490 1459 aa28.12■■■□□ 2.09
CCDC78-206ENST00000463539 C9orf84Q5VXU9 1444 aa28.12■■■□□ 2.09
CCDC78-206ENST00000463539 TSPY4P0CV99 314 aa28.11■■■□□ 2.09
CCDC78-206ENST00000463539 TSPY10P0CW01 314 aa28.11■■■□□ 2.09
CCDC78-206ENST00000463539 DNAJC5Q9H3Z4 198 aa28.11■■■□□ 2.09
CCDC78-206ENST00000463539 ADGBQ8N7X0 1667 aa28.09■■■□□ 2.09
CCDC78-206ENST00000463539 NCOA1Q15788 1441 aa28.09■■■□□ 2.09
CCDC78-206ENST00000463539 ANKRD30AQ9BXX3 1397 aa28.09■■■□□ 2.09
CCDC78-206ENST00000463539 FANCAO15360 1455 aa28.09■■■□□ 2.09
CCDC78-206ENST00000463539 ABCC1P33527 1531 aa28.08■■■□□ 2.09
CCDC78-206ENST00000463539 CLSPNQ9HAW4 1339 aa28.07■■■□□ 2.08
CCDC78-206ENST00000463539 ARHGEF12Q9NZN5 1544 aa28.05■■■□□ 2.08
CCDC78-206ENST00000463539 CD109Q6YHK3 1445 aa28.05■■■□□ 2.08
CCDC78-206ENST00000463539 KDM6BO15054 1643 aa28■■■□□ 2.07
CCDC78-206ENST00000463539 MAST1Q9Y2H9 1570 aa27.98■■■□□ 2.07
CCDC78-206ENST00000463539 ADGRL1O94910 1474 aa27.97■■■□□ 2.07
CCDC78-206ENST00000463539 ACIN1Q9UKV3 1341 aaKnown RBP27.97■■■□□ 2.07
CCDC78-206ENST00000463539 TRAPPC8Q9Y2L5 1435 aa27.96■■■□□ 2.07
CCDC78-206ENST00000463539 KIF15Q9NS87 1388 aa27.95■■■□□ 2.07
CCDC78-206ENST00000463539 GLI2P10070 1586 aa27.95■■■□□ 2.06
CCDC78-206ENST00000463539 CFAP74Q9C0B2 1584 aa27.94■■■□□ 2.06
CCDC78-206ENST00000463539 ANKRD50Q9ULJ7 1429 aa27.93■■■□□ 2.06
CCDC78-206ENST00000463539 SCAPERQ9BY12 1400 aa27.92■■■□□ 2.06
CCDC78-206ENST00000463539 TRIM52Q96A61 297 aa27.91■■■□□ 2.06
CCDC78-206ENST00000463539 DIP2BQ9P265 1576 aa27.9■■■□□ 2.06
CCDC78-206ENST00000463539 MAP3K4Q9Y6R4 1608 aa27.9■■■□□ 2.06
CCDC78-206ENST00000463539 PLXNC1O60486 1568 aa27.88■■■□□ 2.05
CCDC78-206ENST00000463539 FAM69CQ0P6D2 419 aa27.88■■■□□ 2.05
CCDC78-206ENST00000463539 AFAP1Q8N556 730 aa27.88■■■□□ 2.05
CCDC78-206ENST00000463539 SPAG9O60271 1321 aaKnown RBP27.87■■■□□ 2.05
CCDC78-206ENST00000463539 NEO1Q92859 1461 aa27.86■■■□□ 2.05
CCDC78-206ENST00000463539 RTEL1-TNFRSF6BF6WH68 1400 aa27.84■■■□□ 2.05
CCDC78-206ENST00000463539 ZFYVE16Q7Z3T8 1539 aa27.83■■■□□ 2.05
CCDC78-206ENST00000463539 ZNF518AQ6AHZ1 1483 aa27.81■■■□□ 2.04
CCDC78-206ENST00000463539 DUOX2Q9NRD8 1548 aa27.79■■■□□ 2.04
CCDC78-206ENST00000463539 POGZQ7Z3K3 1410 aa27.79■■■□□ 2.04
CCDC78-206ENST00000463539 MPHOSPH9Q99550 1183 aa27.78■■■□□ 2.04
CCDC78-206ENST00000463539 INO80Q9ULG1 1556 aaPredicted RBP27.77■■■□□ 2.04
CCDC78-206ENST00000463539 ATP7AQ04656 1500 aa27.77■■■□□ 2.04
CCDC78-206ENST00000463539 DENND4BO75064 1496 aaPredicted RBP27.74■■■□□ 2.03
CCDC78-206ENST00000463539 ERBINQ96RT1 1412 aa27.74■■■□□ 2.03
CCDC78-206ENST00000463539 SLC4A1APQ9BWU0 796 aaKnown RBP27.72■■■□□ 2.03
CCDC78-206ENST00000463539 MYT1LQ9UL68 1186 aa27.72■■■□□ 2.03
CCDC78-206ENST00000463539 PZPP20742 1482 aa27.72■■■□□ 2.03
CCDC78-206ENST00000463539 KDM5CP41229 1560 aa27.71■■■□□ 2.03
CCDC78-206ENST00000463539 TEX14Q8IWB6 1497 aa27.7■■■□□ 2.03
CCDC78-206ENST00000463539 NUP155O75694 1391 aa27.7■■■□□ 2.02
CCDC78-206ENST00000463539 KDM5DQ9BY66 1539 aa27.69■■■□□ 2.02
CCDC78-206ENST00000463539 SIN3AQ96ST3 1273 aa27.68■■■□□ 2.02
CCDC78-206ENST00000463539 NEUROD1Q13562 356 aa27.66■■■□□ 2.02
CCDC78-206ENST00000463539 MLH3Q9UHC1 1453 aa27.66■■■□□ 2.02
CCDC78-206ENST00000463539 UNC13BO14795 1591 aa27.64■■■□□ 2.02
CCDC78-206ENST00000463539 PPRC1Q5VV67 1664 aaKnown RBP27.64■■■□□ 2.01
CCDC78-206ENST00000463539 KIF13AQ9H1H9 1805 aa27.64■■■□□ 2.01
CCDC78-206ENST00000463539 HECW2Q9P2P5 1572 aa27.63■■■□□ 2.01
CCDC78-206ENST00000463539 RAPGEF3O95398 923 aa27.63■■■□□ 2.01
CCDC78-206ENST00000463539 KIDINS220Q9ULH0 1771 aa27.63■■■□□ 2.01
CCDC78-206ENST00000463539 FOXD1Q16676 465 aa27.61■■■□□ 2.01
CCDC78-206ENST00000463539 TSPOAP1O95153 1857 aa27.6■■■□□ 2.01
CCDC78-206ENST00000463539 DHX29Q7Z478 1369 aaKnown RBP27.6■■■□□ 2.01
CCDC78-206ENST00000463539 MAGI2Q86UL8 1455 aa27.59■■■□□ 2.01
CCDC78-206ENST00000463539 TIMELESSQ9UNS1 1208 aa27.58■■■□□ 2.01
CCDC78-206ENST00000463539 FAM135AQ9P2D6 1515 aa27.58■■■□□ 2.01
CCDC78-206ENST00000463539 PKD2Q13563 968 aa27.57■■■□□ 2
CCDC78-206ENST00000463539 RICTORQ6R327 1708 aa27.57■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 126.1 ms