RNA–Protein interactions for RNA: ENST00000463417.5

CAPN7-206, Transcript of calpain 7, humanhuman

TSL 2

Gene CAPN7, Length 2,319 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN7-206ENST00000463417 CCDC88BA6NC98 1476 aa9.73□□□□□ -0.85
CAPN7-206ENST00000463417 WASHC2CQ9Y4E1 1318 aa9.73□□□□□ -0.85
CAPN7-206ENST00000463417 PYGBP11216 843 aa9.73□□□□□ -0.85
CAPN7-206ENST00000463417 IRX6P78412 446 aaPredicted RBP9.73□□□□□ -0.85
CAPN7-206ENST00000463417 DDX10Q13206 875 aaKnown RBP9.73□□□□□ -0.85
CAPN7-206ENST00000463417 NPM2Q86SE8 214 aaKnown RBP9.73□□□□□ -0.85
CAPN7-206ENST00000463417 PPP4R2Q9NY27 417 aa9.73□□□□□ -0.85
CAPN7-206ENST00000463417 CHRM1P11229 460 aaPredicted RBP9.72□□□□□ -0.85
CAPN7-206ENST00000463417 ARID3AQ99856 593 aa9.72□□□□□ -0.85
CAPN7-206ENST00000463417 ZMYND15Q9H091 742 aa9.72□□□□□ -0.85
CAPN7-206ENST00000463417 RASEFQ8IZ41 740 aa9.71□□□□□ -0.85
CAPN7-206ENST00000463417 GPBP1L1Q9HC44 474 aaPredicted RBP9.71□□□□□ -0.85
CAPN7-206ENST00000463417 TESPA1A2RU30 521 aaPredicted RBP9.71□□□□□ -0.86
CAPN7-206ENST00000463417 ZMYND10O75800 440 aa9.71□□□□□ -0.86
CAPN7-206ENST00000463417 C1QBPQ07021 282 aaKnown RBP9.71□□□□□ -0.86
CAPN7-206ENST00000463417 IPO9Q96P70 1041 aaKnown RBP9.71□□□□□ -0.86
CAPN7-206ENST00000463417 SOGA1O94964 1423 aa9.71□□□□□ -0.86
CAPN7-206ENST00000463417 ARHGEF1Q92888 912 aaKnown RBP9.7□□□□□ -0.86
CAPN7-206ENST00000463417 GOLGA3Q08378 1498 aa9.7□□□□□ -0.86
CAPN7-206ENST00000463417 EEA1Q15075 1411 aa9.7□□□□□ -0.86
CAPN7-206ENST00000463417 C1orf115Q9H7X2 142 aa9.68□□□□□ -0.86
CAPN7-206ENST00000463417 PEG3Q9GZU2 1588 aa9.68□□□□□ -0.86
CAPN7-206ENST00000463417 CLIP1P30622 1438 aa9.68□□□□□ -0.86
CAPN7-206ENST00000463417 VPS8Q8N3P4 1428 aa9.68□□□□□ -0.86
CAPN7-206ENST00000463417 CUX2O14529 1486 aa9.67□□□□□ -0.86
CAPN7-206ENST00000463417 MNX1P50219 401 aaPredicted RBP9.67□□□□□ -0.86
CAPN7-206ENST00000463417 RSPH6AQ9H0K4 717 aa9.67□□□□□ -0.86
CAPN7-206ENST00000463417 USP35Q9P2H5 1018 aa9.66□□□□□ -0.86
CAPN7-206ENST00000463417 ANP32CO43423 234 aa9.65□□□□□ -0.86
CAPN7-206ENST00000463417 BAZ1AQ9NRL2 1556 aaPredicted RBP9.65□□□□□ -0.86
CAPN7-206ENST00000463417 WDR97A6NE52 1622 aa9.65□□□□□ -0.87
CAPN7-206ENST00000463417 RUSC2Q8N2Y8 1516 aa9.65□□□□□ -0.87
CAPN7-206ENST00000463417 ANP32AP39687 249 aaKnown RBP9.65□□□□□ -0.87
CAPN7-206ENST00000463417 BRPF3Q9ULD4 1205 aa9.65□□□□□ -0.87
CAPN7-206ENST00000463417 SMARCA2P51531 1590 aa9.64□□□□□ -0.87
CAPN7-206ENST00000463417 E2F4Q16254 413 aa9.64□□□□□ -0.87
CAPN7-206ENST00000463417 B4GALNT3Q6L9W6 998 aa9.64□□□□□ -0.87
CAPN7-206ENST00000463417 WIZO95785 1651 aa9.63□□□□□ -0.87
CAPN7-206ENST00000463417 MAPKBP1O60336 1514 aa9.63□□□□□ -0.87
CAPN7-206ENST00000463417 MROH2BQ7Z745 1585 aa9.62□□□□□ -0.87
CAPN7-206ENST00000463417 HMGXB3Q12766 1538 aa9.62□□□□□ -0.87
CAPN7-206ENST00000463417 CREBZFQ9NS37 354 aa9.61□□□□□ -0.87
CAPN7-206ENST00000463417 HNRNPUQ00839 825 aaKnown RBP eCLIP9.61□□□□□ -0.87
CAPN7-206ENST00000463417 MFRPQ9BY79 579 aa9.61□□□□□ -0.87
CAPN7-206ENST00000463417 SMARCA4P51532 1647 aa9.6□□□□□ -0.87
CAPN7-206ENST00000463417 ARID3CA6NKF2 412 aa9.6□□□□□ -0.87
CAPN7-206ENST00000463417 NEFMP07197 916 aa9.6□□□□□ -0.87
CAPN7-206ENST00000463417 BARGINQ6ZT62 677 aa9.6□□□□□ -0.87
CAPN7-206ENST00000463417 CC2D2AQ9P2K1 1620 aa9.6□□□□□ -0.87
CAPN7-206ENST00000463417 PPP1R37O75864 691 aa9.59□□□□□ -0.87
CAPN7-206ENST00000463417 KIF21BO75037 1637 aa9.59□□□□□ -0.87
CAPN7-206ENST00000463417 GLIPR1L2Q4G1C9 344 aa9.59□□□□□ -0.87
CAPN7-206ENST00000463417 CECR2Q9BXF3 1484 aa9.58□□□□□ -0.88
CAPN7-206ENST00000463417 CEP164Q9UPV0 1460 aa9.58□□□□□ -0.88
CAPN7-206ENST00000463417 RRBP1Q9P2E9 1410 aaKnown RBP9.58□□□□□ -0.88
CAPN7-206ENST00000463417 NCAPD3P42695 1498 aa9.57□□□□□ -0.88
CAPN7-206ENST00000463417 PDIA4P13667 645 aaKnown RBP9.57□□□□□ -0.88
CAPN7-206ENST00000463417 KDM4CQ9H3R0 1056 aa9.56□□□□□ -0.88
CAPN7-206ENST00000463417 MKRN3Q13064 507 aaKnown RBP9.55□□□□□ -0.88
CAPN7-206ENST00000463417 FAM43AQ8N2R8 423 aa9.55□□□□□ -0.88
CAPN7-206ENST00000463417 LAS1LQ9Y4W2 734 aaKnown RBP9.54□□□□□ -0.88
CAPN7-206ENST00000463417 AK7Q96M32 723 aa9.54□□□□□ -0.88
CAPN7-206ENST00000463417 PPM1GO15355 546 aaPredicted RBP9.53□□□□□ -0.88
CAPN7-206ENST00000463417 HIRIP3Q9BW71 556 aaPredicted RBP9.52□□□□□ -0.89
CAPN7-206ENST00000463417 BAZ1BQ9UIG0 1483 aaKnown RBP9.52□□□□□ -0.89
CAPN7-206ENST00000463417 APBB1O00213 710 aa9.51□□□□□ -0.89
CAPN7-206ENST00000463417 RBM26Q5T8P6 1007 aaKnown RBP9.51□□□□□ -0.89
CAPN7-206ENST00000463417 RAB3GAP2Q9H2M9 1393 aa9.5□□□□□ -0.89
CAPN7-206ENST00000463417 PDE4CQ08493 712 aa9.5□□□□□ -0.89
CAPN7-206ENST00000463417 NCKAP5LQ9HCH0 1330 aa9.49□□□□□ -0.89
CAPN7-206ENST00000463417 SMYD5Q6GMV2 418 aa9.49□□□□□ -0.89
CAPN7-206ENST00000463417 FRAT1Q92837 279 aaPredicted RBP9.48□□□□□ -0.89
CAPN7-206ENST00000463417 SIN3AQ96ST3 1273 aa9.48□□□□□ -0.89
CAPN7-206ENST00000463417 PCDHB8Q9UN66 801 aa9.48□□□□□ -0.89
CAPN7-206ENST00000463417 CLEC11AQ9Y240 323 aa9.48□□□□□ -0.89
CAPN7-206ENST00000463417 PCDHB13Q9Y5F0 798 aa9.48□□□□□ -0.89
CAPN7-206ENST00000463417 KRI1Q8N9T8 703 aaKnown RBP9.47□□□□□ -0.89
CAPN7-206ENST00000463417 NECTIN2Q92692 538 aa9.47□□□□□ -0.89
CAPN7-206ENST00000463417 CCNB3Q8WWL7 1395 aa9.47□□□□□ -0.89
CAPN7-206ENST00000463417 ZBED9Q6R2W3 1325 aa9.47□□□□□ -0.89
CAPN7-206ENST00000463417 PDE4DQ08499 809 aa9.47□□□□□ -0.89
CAPN7-206ENST00000463417 PDAP1Q13442 181 aaKnown RBP9.47□□□□□ -0.89
CAPN7-206ENST00000463417 KANK4Q5T7N3 995 aaPredicted RBP9.47□□□□□ -0.89
CAPN7-206ENST00000463417 ATAD2BQ9ULI0 1458 aa9.46□□□□□ -0.89
CAPN7-206ENST00000463417 TRIM66O15016 1216 aa9.46□□□□□ -0.9
CAPN7-206ENST00000463417 PRR29P0C7W0 189 aa9.46□□□□□ -0.9
CAPN7-206ENST00000463417 MLLT3P42568 568 aaPredicted RBP9.45□□□□□ -0.9
CAPN7-206ENST00000463417 GPIHBP1Q8IV16 184 aa9.45□□□□□ -0.9
CAPN7-206ENST00000463417 FAM117AQ9C073 453 aa9.45□□□□□ -0.9
CAPN7-206ENST00000463417 RNF123Q5XPI4 1314 aa9.45□□□□□ -0.9
CAPN7-206ENST00000463417 ZNF467Q7Z7K2 595 aaPredicted RBP9.45□□□□□ -0.9
CAPN7-206ENST00000463417 SPDYE1Q8NFV5 336 aaPredicted RBP9.44□□□□□ -0.9
CAPN7-206ENST00000463417 DCAF11Q8TEB1 546 aa9.44□□□□□ -0.9
CAPN7-206ENST00000463417 LARP6Q9BRS8 491 aaKnown RBP9.44□□□□□ -0.9
CAPN7-206ENST00000463417 NFKBIBQ15653 356 aa9.44□□□□□ -0.9
CAPN7-206ENST00000463417 FBXO22Q8NEZ5 403 aa9.44□□□□□ -0.9
CAPN7-206ENST00000463417 RAPGEF2Q9Y4G8 1499 aa9.43□□□□□ -0.9
CAPN7-206ENST00000463417 RRP9O43818 475 aaKnown RBP9.43□□□□□ -0.9
CAPN7-206ENST00000463417 TOP2AP11388 1531 aaKnown RBP9.43□□□□□ -0.9
CAPN7-206ENST00000463417 SYNJ1O43426 1573 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms