RNA–Protein interactions for RNA: ENST00000463343.1

SF1-212, Transcript of splicing factor 1, humanhuman

TSL 2

Gene SF1, Length 983 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-212ENST00000463343 TTC37Q6PGP7 1564 aa28.21■■■□□ 2.11
SF1-212ENST00000463343 PLCH2O75038 1416 aa28.2■■■□□ 2.11
SF1-212ENST00000463343 POGZQ7Z3K3 1410 aa28.2■■■□□ 2.11
SF1-212ENST00000463343 LRRIQ1Q96JM4 1722 aa28.2■■■□□ 2.1
SF1-212ENST00000463343 CCDC18Q5T9S5 1454 aa28.16■■■□□ 2.1
SF1-212ENST00000463343 FBXO41Q8TF61 875 aa28.15■■■□□ 2.1
SF1-212ENST00000463343 ZFYVE16Q7Z3T8 1539 aa28.14■■■□□ 2.1
SF1-212ENST00000463343 SCAPERQ9BY12 1400 aa28.13■■■□□ 2.09
SF1-212ENST00000463343 LMTK3Q96Q04 1460 aa28.13■■■□□ 2.09
SF1-212ENST00000463343 EFCAB2Q5VUJ9 269 aa28.12■■■□□ 2.09
SF1-212ENST00000463343 TROQ12816 1431 aaPredicted RBP28.11■■■□□ 2.09
SF1-212ENST00000463343 VPS8Q8N3P4 1428 aa28.11■■■□□ 2.09
SF1-212ENST00000463343 YEATS2Q9ULM3 1422 aa28.11■■■□□ 2.09
SF1-212ENST00000463343 RIMS1Q86UR5 1692 aaKnown RBP28.1■■■□□ 2.09
SF1-212ENST00000463343 ATP10AO60312 1499 aa28.03■■■□□ 2.08
SF1-212ENST00000463343 MYO5CQ9NQX4 1742 aa28.03■■■□□ 2.08
SF1-212ENST00000463343 SIGLEC1Q9BZZ2 1709 aa28.02■■■□□ 2.08
SF1-212ENST00000463343 KIF14Q15058 1648 aa27.99■■■□□ 2.07
SF1-212ENST00000463343 C9orf84Q5VXU9 1444 aa27.97■■■□□ 2.07
SF1-212ENST00000463343 ZNF518AQ6AHZ1 1483 aa27.96■■■□□ 2.07
SF1-212ENST00000463343 ARHGEF12Q9NZN5 1544 aa27.95■■■□□ 2.06
SF1-212ENST00000463343 MTUS2Q5JR59 1369 aa27.95■■■□□ 2.06
SF1-212ENST00000463343 MLECQ14165 292 aa27.94■■■□□ 2.06
SF1-212ENST00000463343 FER1L4A9Z1Z3 1794 aa27.94■■■□□ 2.06
SF1-212ENST00000463343 HSPA2P54652 639 aa27.92■■■□□ 2.06
SF1-212ENST00000463343 KDM5CP41229 1560 aa27.9■■■□□ 2.06
SF1-212ENST00000463343 ARHGAP5Q13017 1502 aa27.89■■■□□ 2.06
SF1-212ENST00000463343 AFAP1Q8N556 730 aa27.89■■■□□ 2.06
SF1-212ENST00000463343 TIAM1Q13009 1591 aa27.87■■■□□ 2.05
SF1-212ENST00000463343 PLPPR3Q6T4P5 718 aa27.86■■■□□ 2.05
SF1-212ENST00000463343 KANK4Q5T7N3 995 aaPredicted RBP27.85■■■□□ 2.05
SF1-212ENST00000463343 SETD1BQ9UPS6 1966 aaKnown RBP27.84■■■□□ 2.05
SF1-212ENST00000463343 MLH3Q9UHC1 1453 aa27.84■■■□□ 2.05
SF1-212ENST00000463343 MAP3K1Q13233 1512 aa27.84■■■□□ 2.05
SF1-212ENST00000463343 REREQ9P2R6 1566 aa27.84■■■□□ 2.05
SF1-212ENST00000463343 CDC42BPBQ9Y5S2 1711 aa27.83■■■□□ 2.05
SF1-212ENST00000463343 EHBP1L1Q8N3D4 1523 aa27.82■■■□□ 2.04
SF1-212ENST00000463343 APLP2Q06481 763 aa27.82■■■□□ 2.04
SF1-212ENST00000463343 LRRC9Q6ZRR7 1453 aa27.8■■■□□ 2.04
SF1-212ENST00000463343 GPATCH8Q9UKJ3 1502 aaKnown RBP27.79■■■□□ 2.04
SF1-212ENST00000463343 PREX1Q8TCU6 1659 aa27.78■■■□□ 2.04
SF1-212ENST00000463343 DIP2CQ9Y2E4 1556 aa27.77■■■□□ 2.04
SF1-212ENST00000463343 CCNB3Q8WWL7 1395 aa27.77■■■□□ 2.04
SF1-212ENST00000463343 PREX2Q70Z35 1606 aa27.77■■■□□ 2.04
SF1-212ENST00000463343 CEBPAP49715 358 aaPredicted RBP27.76■■■□□ 2.03
SF1-212ENST00000463343 MYT1LQ9UL68 1186 aa27.76■■■□□ 2.03
SF1-212ENST00000463343 AGLP35573 1532 aa27.76■■■□□ 2.03
SF1-212ENST00000463343 CERKQ8TCT0 537 aa27.75■■■□□ 2.03
SF1-212ENST00000463343 DMRT2Q9Y5R5 561 aa27.75■■■□□ 2.03
SF1-212ENST00000463343 ABCC1P33527 1531 aa27.73■■■□□ 2.03
SF1-212ENST00000463343 TRAPPC8Q9Y2L5 1435 aa27.73■■■□□ 2.03
SF1-212ENST00000463343 CDC42BPAQ5VT25 1732 aa27.72■■■□□ 2.03
SF1-212ENST00000463343 NCOA2Q15596 1464 aa27.72■■■□□ 2.03
SF1-212ENST00000463343 CFDP1Q9UEE9 299 aaPredicted RBP27.72■■■□□ 2.03
SF1-212ENST00000463343 ZNF777Q9ULD5 760 aaPredicted RBP27.71■■■□□ 2.03
SF1-212ENST00000463343 ABCA6Q8N139 1617 aa27.7■■■□□ 2.02
SF1-212ENST00000463343 UHRF1BP1Q6BDS2 1440 aa27.69■■■□□ 2.02
SF1-212ENST00000463343 ITSN2Q9NZM3 1697 aa27.68■■■□□ 2.02
SF1-212ENST00000463343 SUPT6HQ7KZ85 1726 aaKnown RBP27.67■■■□□ 2.02
SF1-212ENST00000463343 ESF1Q9H501 851 aaKnown RBP27.65■■■□□ 2.02
SF1-212ENST00000463343 KIDINS220Q9ULH0 1771 aa27.65■■■□□ 2.02
SF1-212ENST00000463343 CNTLNQ9NXG0 1405 aa27.63■■■□□ 2.01
SF1-212ENST00000463343 ZNF644Q9H582 1327 aaPredicted RBP27.63■■■□□ 2.01
SF1-212ENST00000463343 STRCQ7RTU9 1775 aa27.63■■■□□ 2.01
SF1-212ENST00000463343 C3P01024 1663 aa27.61■■■□□ 2.01
SF1-212ENST00000463343 HNRNPMP52272 730 aaKnown RBP eCLIP27.6■■■□□ 2.01
SF1-212ENST00000463343 SAMD9LQ8IVG5 1584 aa27.59■■■□□ 2.01
SF1-212ENST00000463343 KIAA1107Q9UPP5 1409 aa27.58■■■□□ 2.01
SF1-212ENST00000463343 PTPRTO14522 1441 aa27.57■■■□□ 2
SF1-212ENST00000463343 SPAG9O60271 1321 aaKnown RBP27.55■■■□□ 2
SF1-212ENST00000463343 PLEKHH2Q8IVE3 1493 aa27.55■■■□□ 2
SF1-212ENST00000463343 NPATQ14207 1427 aa27.52■■■□□ 2
SF1-212ENST00000463343 MYOM3Q5VTT5 1437 aa27.51■■□□□ 1.99
SF1-212ENST00000463343 SYCP2Q9BX26 1530 aa27.5■■□□□ 1.99
SF1-212ENST00000463343 MROH2AA6NES4 1674 aa27.49■■□□□ 1.99
SF1-212ENST00000463343 PPARGC1BQ86YN6 1023 aaKnown RBP27.48■■□□□ 1.99
SF1-212ENST00000463343 ZMYM3Q14202 1370 aa27.48■■□□□ 1.99
SF1-212ENST00000463343 MBD5Q9P267 1494 aa27.47■■□□□ 1.99
SF1-212ENST00000463343 MIA2Q96PC5 1412 aa27.47■■□□□ 1.99
SF1-212ENST00000463343 PPP6R1Q9UPN7 881 aa27.46■■□□□ 1.99
SF1-212ENST00000463343 ATP7AQ04656 1500 aa27.45■■□□□ 1.98
SF1-212ENST00000463343 CAMSAP2Q08AD1 1489 aa27.44■■□□□ 1.98
SF1-212ENST00000463343 NCOA1Q15788 1441 aa27.43■■□□□ 1.98
SF1-212ENST00000463343 A2MP01023 1474 aa27.42■■□□□ 1.98
SF1-212ENST00000463343 PLXNC1O60486 1568 aa27.42■■□□□ 1.98
SF1-212ENST00000463343 INO80Q9ULG1 1556 aaPredicted RBP27.42■■□□□ 1.98
SF1-212ENST00000463343 RSPH4AQ5TD94 716 aa27.41■■□□□ 1.98
SF1-212ENST00000463343 IQSEC2Q5JU85 1478 aa27.38■■□□□ 1.97
SF1-212ENST00000463343 FGD6Q6ZV73 1430 aa27.37■■□□□ 1.97
SF1-212ENST00000463343 LTBP4Q8N2S1 1624 aa27.36■■□□□ 1.97
SF1-212ENST00000463343 RTEL1-TNFRSF6BF6WH68 1400 aa27.35■■□□□ 1.97
SF1-212ENST00000463343 CAMSAP1Q5T5Y3 1602 aa27.33■■□□□ 1.97
SF1-212ENST00000463343 ADGBQ8N7X0 1667 aa27.33■■□□□ 1.97
SF1-212ENST00000463343 CCDC141Q6ZP82 1450 aa27.32■■□□□ 1.96
SF1-212ENST00000463343 GGT6Q6P531 493 aa27.32■■□□□ 1.96
SF1-212ENST00000463343 PTPRKQ15262 1439 aa27.32■■□□□ 1.96
SF1-212ENST00000463343 CLTCQ00610 1675 aaKnown RBP27.31■■□□□ 1.96
SF1-212ENST00000463343 TSPY4P0CV99 314 aa27.31■■□□□ 1.96
SF1-212ENST00000463343 TSPY10P0CW01 314 aa27.31■■□□□ 1.96
SF1-212ENST00000463343 ARHGEF5Q12774 1597 aa27.31■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 113.5 ms