RNA–Protein interactions for RNA: ENST00000463317.6_PAR_Y

VAMP7-204, Transcript of vesicle associated membrane protein 7, humanhuman

TSL 5

Gene VAMP7, Length 673 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP7-204ENST00000463317_PAR_Y ARHGEF12Q9NZN5 1544 aa10.67□□□□□ -0.7
VAMP7-204ENST00000463317_PAR_Y SRCAPQ6ZRS2 3230 aa10.66□□□□□ -0.7
VAMP7-204ENST00000463317_PAR_Y ZNF335Q9H4Z2 1342 aaPredicted RBP10.66□□□□□ -0.7
VAMP7-204ENST00000463317_PAR_Y NCOA1Q15788 1441 aa10.66□□□□□ -0.7
VAMP7-204ENST00000463317_PAR_Y KIAA0556O60303 1618 aa10.66□□□□□ -0.7
VAMP7-204ENST00000463317_PAR_Y UGGT2Q9NYU1 1516 aa10.65□□□□□ -0.7
VAMP7-204ENST00000463317_PAR_Y RICTORQ6R327 1708 aa10.65□□□□□ -0.7
VAMP7-204ENST00000463317_PAR_Y MLECQ14165 292 aa10.65□□□□□ -0.7
VAMP7-204ENST00000463317_PAR_Y FHOD3Q2V2M9 1422 aa10.64□□□□□ -0.71
VAMP7-204ENST00000463317_PAR_Y ABCA8O94911 1581 aa10.63□□□□□ -0.71
VAMP7-204ENST00000463317_PAR_Y DENND4BO75064 1496 aaPredicted RBP10.62□□□□□ -0.71
VAMP7-204ENST00000463317_PAR_Y PIP4K2BP78356 416 aa10.62□□□□□ -0.71
VAMP7-204ENST00000463317_PAR_Y ZMYM4Q5VZL5 1548 aa10.62□□□□□ -0.71
VAMP7-204ENST00000463317_PAR_Y ZFYVE16Q7Z3T8 1539 aa10.61□□□□□ -0.71
VAMP7-204ENST00000463317_PAR_Y NPM3O75607 178 aaKnown RBP10.6□□□□□ -0.71
VAMP7-204ENST00000463317_PAR_Y CARMIL1Q5VZK9 1371 aa10.6□□□□□ -0.71
VAMP7-204ENST00000463317_PAR_Y EFCAB5A4FU69 1503 aa10.59□□□□□ -0.71
VAMP7-204ENST00000463317_PAR_Y MAGI2Q86UL8 1455 aa10.58□□□□□ -0.72
VAMP7-204ENST00000463317_PAR_Y KCNA4P22459 653 aa10.58□□□□□ -0.72
VAMP7-204ENST00000463317_PAR_Y TOM1O60784 492 aa10.57□□□□□ -0.72
VAMP7-204ENST00000463317_PAR_Y KIF27Q86VH2 1401 aa10.57□□□□□ -0.72
VAMP7-204ENST00000463317_PAR_Y POTEAQ6S8J7 498 aa10.56□□□□□ -0.72
VAMP7-204ENST00000463317_PAR_Y CAMSAP1Q5T5Y3 1602 aa10.55□□□□□ -0.72
VAMP7-204ENST00000463317_PAR_Y ATP10BO94823 1461 aa10.54□□□□□ -0.72
VAMP7-204ENST00000463317_PAR_Y TRAPPC8Q9Y2L5 1435 aa10.53□□□□□ -0.72
VAMP7-204ENST00000463317_PAR_Y ALKQ9UM73 1620 aa10.53□□□□□ -0.72
VAMP7-204ENST00000463317_PAR_Y NCKAP5LQ9HCH0 1330 aa10.53□□□□□ -0.72
VAMP7-204ENST00000463317_PAR_Y HECW1Q76N89 1606 aa10.52□□□□□ -0.73
VAMP7-204ENST00000463317_PAR_Y C3P01024 1663 aa10.52□□□□□ -0.73
VAMP7-204ENST00000463317_PAR_Y SETD1AO15047 1707 aaKnown RBP10.52□□□□□ -0.73
VAMP7-204ENST00000463317_PAR_Y ATP10AO60312 1499 aa10.51□□□□□ -0.73
VAMP7-204ENST00000463317_PAR_Y C9orf84Q5VXU9 1444 aa10.5□□□□□ -0.73
VAMP7-204ENST00000463317_PAR_Y UPF1Q92900 1129 aaKnown RBP eCLIP10.49□□□□□ -0.73
VAMP7-204ENST00000463317_PAR_Y ARID3CA6NKF2 412 aa10.48□□□□□ -0.73
VAMP7-204ENST00000463317_PAR_Y PKD2Q13563 968 aa10.48□□□□□ -0.73
VAMP7-204ENST00000463317_PAR_Y PTPRKQ15262 1439 aa10.48□□□□□ -0.73
VAMP7-204ENST00000463317_PAR_Y TCOF1Q13428 1488 aaKnown RBP10.48□□□□□ -0.73
VAMP7-204ENST00000463317_PAR_Y CFAP74Q9C0B2 1584 aa10.48□□□□□ -0.73
VAMP7-204ENST00000463317_PAR_Y PLA2R1Q13018 1463 aa10.47□□□□□ -0.73
VAMP7-204ENST00000463317_PAR_Y CPS1P31327 1500 aa10.47□□□□□ -0.73
VAMP7-204ENST00000463317_PAR_Y GOLGA3Q08378 1498 aa10.45□□□□□ -0.74
VAMP7-204ENST00000463317_PAR_Y RAPGEF2Q9Y4G8 1499 aa10.45□□□□□ -0.74
VAMP7-204ENST00000463317_PAR_Y SHANK2Q9UPX8 1470 aa10.42□□□□□ -0.74
VAMP7-204ENST00000463317_PAR_Y NPATQ14207 1427 aa10.41□□□□□ -0.74
VAMP7-204ENST00000463317_PAR_Y SCAPERQ9BY12 1400 aa10.4□□□□□ -0.75
VAMP7-204ENST00000463317_PAR_Y ZNF142P52746 1687 aaPredicted RBP10.39□□□□□ -0.75
VAMP7-204ENST00000463317_PAR_Y AGLP35573 1532 aa10.38□□□□□ -0.75
VAMP7-204ENST00000463317_PAR_Y REREQ9P2R6 1566 aa10.38□□□□□ -0.75
VAMP7-204ENST00000463317_PAR_Y CNTLNQ9NXG0 1405 aa10.37□□□□□ -0.75
VAMP7-204ENST00000463317_PAR_Y GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.37□□□□□ -0.75
VAMP7-204ENST00000463317_PAR_Y ESF1Q9H501 851 aaKnown RBP10.36□□□□□ -0.75
VAMP7-204ENST00000463317_PAR_Y SUPT6HQ7KZ85 1726 aaKnown RBP10.35□□□□□ -0.75
VAMP7-204ENST00000463317_PAR_Y CEP170BQ9Y4F5 1589 aaPredicted RBP10.35□□□□□ -0.75
VAMP7-204ENST00000463317_PAR_Y CTTNBP2Q8WZ74 1663 aa10.34□□□□□ -0.75
VAMP7-204ENST00000463317_PAR_Y MYO3AQ8NEV4 1616 aa10.34□□□□□ -0.75
VAMP7-204ENST00000463317_PAR_Y VWDEQ8N2E2 1590 aa10.34□□□□□ -0.75
VAMP7-204ENST00000463317_PAR_Y DIP2CQ9Y2E4 1556 aa10.34□□□□□ -0.75
VAMP7-204ENST00000463317_PAR_Y NEURL4Q96JN8 1562 aa10.33□□□□□ -0.76
VAMP7-204ENST00000463317_PAR_Y MROH2AA6NES4 1674 aa10.33□□□□□ -0.76
VAMP7-204ENST00000463317_PAR_Y HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.32□□□□□ -0.76
VAMP7-204ENST00000463317_PAR_Y HNRNPUL2Q1KMD3 747 aaKnown RBP10.32□□□□□ -0.76
VAMP7-204ENST00000463317_PAR_Y KDM5CP41229 1560 aa10.31□□□□□ -0.76
VAMP7-204ENST00000463317_PAR_Y RAPGEF6Q8TEU7 1601 aa10.31□□□□□ -0.76
VAMP7-204ENST00000463317_PAR_Y RNF17Q9BXT8 1623 aaKnown RBP10.31□□□□□ -0.76
VAMP7-204ENST00000463317_PAR_Y ZMYM3Q14202 1370 aa10.3□□□□□ -0.76
VAMP7-204ENST00000463317_PAR_Y CACNB1Q02641 598 aaPredicted RBP10.3□□□□□ -0.76
VAMP7-204ENST00000463317_PAR_Y FAM9AQ8IZU1 332 aaPredicted RBP10.3□□□□□ -0.76
VAMP7-204ENST00000463317_PAR_Y RNF39Q9H2S5 420 aa10.3□□□□□ -0.76
VAMP7-204ENST00000463317_PAR_Y PLCH2O75038 1416 aa10.3□□□□□ -0.76
VAMP7-204ENST00000463317_PAR_Y NUP153P49790 1475 aaKnown RBP10.3□□□□□ -0.76
VAMP7-204ENST00000463317_PAR_Y ZNF518AQ6AHZ1 1483 aa10.3□□□□□ -0.76
VAMP7-204ENST00000463317_PAR_Y LRRC7Q96NW7 1537 aa10.29□□□□□ -0.76
VAMP7-204ENST00000463317_PAR_Y PLEKHD1A6NEE1 506 aa10.29□□□□□ -0.76
VAMP7-204ENST00000463317_PAR_Y ABCA6Q8N139 1617 aa10.29□□□□□ -0.76
VAMP7-204ENST00000463317_PAR_Y POLR1AO95602 1720 aaPredicted RBP10.28□□□□□ -0.76
VAMP7-204ENST00000463317_PAR_Y IFFO2Q5TF58 517 aa10.28□□□□□ -0.76
VAMP7-204ENST00000463317_PAR_Y GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.28□□□□□ -0.76
VAMP7-204ENST00000463317_PAR_Y DNMT1P26358 1616 aaKnown RBP10.26□□□□□ -0.77
VAMP7-204ENST00000463317_PAR_Y P3H3Q8IVL6 736 aa10.26□□□□□ -0.77
VAMP7-204ENST00000463317_PAR_Y AFAP1Q8N556 730 aa10.26□□□□□ -0.77
VAMP7-204ENST00000463317_PAR_Y TRIM52Q96A61 297 aa10.26□□□□□ -0.77
VAMP7-204ENST00000463317_PAR_Y STRCP1A6NGW2 1772 aa10.26□□□□□ -0.77
VAMP7-204ENST00000463317_PAR_Y A2ML1A8K2U0 1454 aa10.25□□□□□ -0.77
VAMP7-204ENST00000463317_PAR_Y FAM135BQ49AJ0 1406 aa10.24□□□□□ -0.77
VAMP7-204ENST00000463317_PAR_Y MLH3Q9UHC1 1453 aa10.24□□□□□ -0.77
VAMP7-204ENST00000463317_PAR_Y SYNMO15061 1565 aa10.23□□□□□ -0.77
VAMP7-204ENST00000463317_PAR_Y SETBP1Q9Y6X0 1596 aa10.23□□□□□ -0.77
VAMP7-204ENST00000463317_PAR_Y EFCAB2Q5VUJ9 269 aa10.23□□□□□ -0.77
VAMP7-204ENST00000463317_PAR_Y CDK12Q9NYV4 1490 aaPredicted RBP10.22□□□□□ -0.77
VAMP7-204ENST00000463317_PAR_Y MED14O60244 1454 aa10.21□□□□□ -0.78
VAMP7-204ENST00000463317_PAR_Y ZRANB1Q9UGI0 708 aa10.2□□□□□ -0.78
VAMP7-204ENST00000463317_PAR_Y MYT1LQ9UL68 1186 aa10.2□□□□□ -0.78
VAMP7-204ENST00000463317_PAR_Y CLTCQ00610 1675 aaKnown RBP10.19□□□□□ -0.78
VAMP7-204ENST00000463317_PAR_Y NPHP4O75161 1426 aaPredicted RBP10.19□□□□□ -0.78
VAMP7-204ENST00000463317_PAR_Y ZNF772Q68DY9 489 aaPredicted RBP10.19□□□□□ -0.78
VAMP7-204ENST00000463317_PAR_Y SAMD9Q5K651 1589 aa10.18□□□□□ -0.78
VAMP7-204ENST00000463317_PAR_Y ANKLE2Q86XL3 938 aa10.18□□□□□ -0.78
VAMP7-204ENST00000463317_PAR_Y RBM33Q96EV2 1170 aaKnown RBP10.18□□□□□ -0.78
VAMP7-204ENST00000463317_PAR_Y DEPDC5O75140 1603 aa10.18□□□□□ -0.78
VAMP7-204ENST00000463317_PAR_Y MYO5CQ9NQX4 1742 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms