RNA–Protein interactions for RNA: ENST00000462637.5

PCCB-204, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene PCCB, Length 1,715 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-204ENST00000462637 KCNH8Q96L42 1107 aa22.97■■□□□ 1.27
PCCB-204ENST00000462637 ABCC10Q5T3U5 1492 aa22.96■■□□□ 1.27
PCCB-204ENST00000462637 DAPK1P53355 1430 aa22.94■■□□□ 1.26
PCCB-204ENST00000462637 DNMT1P26358 1616 aaKnown RBP22.94■■□□□ 1.26
PCCB-204ENST00000462637 CAMSAP2Q08AD1 1489 aa22.93■■□□□ 1.26
PCCB-204ENST00000462637 ROCK1Q13464 1354 aa22.93■■□□□ 1.26
PCCB-204ENST00000462637 MAPKBP1O60336 1514 aa22.92■■□□□ 1.26
PCCB-204ENST00000462637 ACIN1Q9UKV3 1341 aaKnown RBP22.91■■□□□ 1.26
PCCB-204ENST00000462637 ABCC5O15440 1437 aa22.91■■□□□ 1.26
PCCB-204ENST00000462637 ASXL2Q76L83 1435 aa22.91■■□□□ 1.26
PCCB-204ENST00000462637 GCC2Q8IWJ2 1684 aa22.9■■□□□ 1.26
PCCB-204ENST00000462637 ZNF644Q9H582 1327 aaPredicted RBP22.89■■□□□ 1.25
PCCB-204ENST00000462637 CHIC2Q9UKJ5 165 aa22.88■■□□□ 1.25
PCCB-204ENST00000462637 WDR7Q9Y4E6 1490 aa22.87■■□□□ 1.25
PCCB-204ENST00000462637 RRP7BPQ9NSQ0 103 aa22.85■■□□□ 1.25
PCCB-204ENST00000462637 CDC42BPAQ5VT25 1732 aa22.85■■□□□ 1.25
PCCB-204ENST00000462637 ZNF777Q9ULD5 760 aaPredicted RBP22.83■■□□□ 1.25
PCCB-204ENST00000462637 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.8■■□□□ 1.243e-8■■■□□ 16.7
PCCB-204ENST00000462637 PREX2Q70Z35 1606 aa22.79■■□□□ 1.24
PCCB-204ENST00000462637 ADGRL2O95490 1459 aa22.78■■□□□ 1.24
PCCB-204ENST00000462637 TIMELESSQ9UNS1 1208 aa22.77■■□□□ 1.24
PCCB-204ENST00000462637 SHANK2Q9UPX8 1470 aa22.77■■□□□ 1.24
PCCB-204ENST00000462637 ZNF316A6NFI3 1004 aaPredicted RBP22.77■■□□□ 1.23
PCCB-204ENST00000462637 CROCC2H7BZ55 1655 aa22.76■■□□□ 1.23
PCCB-204ENST00000462637 ADGBQ8N7X0 1667 aa22.75■■□□□ 1.23
PCCB-204ENST00000462637 ARHGEF5Q12774 1597 aa22.74■■□□□ 1.23
PCCB-204ENST00000462637 NCOA1Q15788 1441 aa22.74■■□□□ 1.23
PCCB-204ENST00000462637 ANKRD30AQ9BXX3 1397 aa22.73■■□□□ 1.23
PCCB-204ENST00000462637 TTC37Q6PGP7 1564 aa22.73■■□□□ 1.23
PCCB-204ENST00000462637 RSPH4AQ5TD94 716 aa22.72■■□□□ 1.23
PCCB-204ENST00000462637 PLCH2O75038 1416 aa22.71■■□□□ 1.23
PCCB-204ENST00000462637 KDM6BO15054 1643 aa22.7■■□□□ 1.23
PCCB-204ENST00000462637 TRIM52Q96A61 297 aa22.7■■□□□ 1.22
PCCB-204ENST00000462637 ARHGAP5Q13017 1502 aa22.7■■□□□ 1.22
PCCB-204ENST00000462637 PLEKHH2Q8IVE3 1493 aa22.69■■□□□ 1.22
PCCB-204ENST00000462637 CDC42BPBQ9Y5S2 1711 aa22.69■■□□□ 1.22
PCCB-204ENST00000462637 C9orf84Q5VXU9 1444 aa22.69■■□□□ 1.22
PCCB-204ENST00000462637 SAMD9LQ8IVG5 1584 aa22.69■■□□□ 1.22
PCCB-204ENST00000462637 TSPY4P0CV99 314 aa22.68■■□□□ 1.22
PCCB-204ENST00000462637 TSPY10P0CW01 314 aa22.68■■□□□ 1.22
PCCB-204ENST00000462637 MBD5Q9P267 1494 aa22.68■■□□□ 1.22
PCCB-204ENST00000462637 FAM69CQ0P6D2 419 aa22.68■■□□□ 1.22
PCCB-204ENST00000462637 MYO5CQ9NQX4 1742 aa22.67■■□□□ 1.22
PCCB-204ENST00000462637 EFCAB2Q5VUJ9 269 aa22.67■■□□□ 1.22
PCCB-204ENST00000462637 SIN3AQ96ST3 1273 aa22.67■■□□□ 1.22
PCCB-204ENST00000462637 CCDC141Q6ZP82 1450 aa22.67■■□□□ 1.22
PCCB-204ENST00000462637 ABCA9Q8IUA7 1624 aa22.66■■□□□ 1.22
PCCB-204ENST00000462637 NEUROD1Q13562 356 aa22.65■■□□□ 1.22
PCCB-204ENST00000462637 KIAA1107Q9UPP5 1409 aa22.65■■□□□ 1.22
PCCB-204ENST00000462637 CD109Q6YHK3 1445 aa22.64■■□□□ 1.22
PCCB-204ENST00000462637 HNRNPMP52272 730 aaKnown RBP eCLIP22.63■■□□□ 1.211e-7■■■□□ 18.3
PCCB-204ENST00000462637 MPHOSPH9Q99550 1183 aa22.62■■□□□ 1.21
PCCB-204ENST00000462637 ARAP3Q8WWN8 1544 aa22.61■■□□□ 1.21
PCCB-204ENST00000462637 ANKRD50Q9ULJ7 1429 aa22.6■■□□□ 1.21
PCCB-204ENST00000462637 SYCP2Q9BX26 1530 aa22.59■■□□□ 1.21
PCCB-204ENST00000462637 DIEXFQ68CQ4 756 aaKnown RBP22.59■■□□□ 1.21
PCCB-204ENST00000462637 GLI2P10070 1586 aa22.58■■□□□ 1.21
PCCB-204ENST00000462637 DENND4BO75064 1496 aaPredicted RBP22.58■■□□□ 1.21
PCCB-204ENST00000462637 TONSLQ96HA7 1378 aa22.58■■□□□ 1.2
PCCB-204ENST00000462637 MAST1Q9Y2H9 1570 aa22.57■■□□□ 1.2
PCCB-204ENST00000462637 KIF15Q9NS87 1388 aa22.56■■□□□ 1.2
PCCB-204ENST00000462637 FANCAO15360 1455 aa22.55■■□□□ 1.2
PCCB-204ENST00000462637 DIP2BQ9P265 1576 aa22.55■■□□□ 1.2
PCCB-204ENST00000462637 SLC4A1APQ9BWU0 796 aaKnown RBP22.52■■□□□ 1.2
PCCB-204ENST00000462637 PPP1R15AO75807 674 aaPredicted RBP22.51■■□□□ 1.19
PCCB-204ENST00000462637 ABCC1P33527 1531 aa22.51■■□□□ 1.19
PCCB-204ENST00000462637 PZPP20742 1482 aa22.5■■□□□ 1.19
PCCB-204ENST00000462637 ARHGEF12Q9NZN5 1544 aa22.49■■□□□ 1.19
PCCB-204ENST00000462637 MAP3K4Q9Y6R4 1608 aa22.49■■□□□ 1.19
PCCB-204ENST00000462637 PLXNC1O60486 1568 aa22.47■■□□□ 1.19
PCCB-204ENST00000462637 ANKRD30BQ9BXX2 1392 aa22.47■■□□□ 1.19
PCCB-204ENST00000462637 KDM5DQ9BY66 1539 aa22.46■■□□□ 1.19
PCCB-204ENST00000462637 SCAPERQ9BY12 1400 aa22.46■■□□□ 1.19
PCCB-204ENST00000462637 TRHP20396 242 aaPredicted RBP22.45■■□□□ 1.19
PCCB-204ENST00000462637 AFAP1Q8N556 730 aa22.45■■□□□ 1.19
PCCB-204ENST00000462637 TRAPPC8Q9Y2L5 1435 aa22.45■■□□□ 1.18
PCCB-204ENST00000462637 ADGRL1O94910 1474 aa22.44■■□□□ 1.18
PCCB-204ENST00000462637 NEO1Q92859 1461 aa22.43■■□□□ 1.18
PCCB-204ENST00000462637 NUP155O75694 1391 aa22.43■■□□□ 1.18
PCCB-204ENST00000462637 RPRD2Q5VT52 1461 aaKnown RBP22.41■■□□□ 1.18
PCCB-204ENST00000462637 FOXD1Q16676 465 aa22.4■■□□□ 1.18
PCCB-204ENST00000462637 PELP1Q8IZL8 1130 aaKnown RBP22.4■■□□□ 1.18
PCCB-204ENST00000462637 DUOX2Q9NRD8 1548 aa22.4■■□□□ 1.18
PCCB-204ENST00000462637 KIF13AQ9H1H9 1805 aa22.4■■□□□ 1.18
PCCB-204ENST00000462637 RTEL1-TNFRSF6BF6WH68 1400 aa22.4■■□□□ 1.18
PCCB-204ENST00000462637 ERBINQ96RT1 1412 aa22.37■■□□□ 1.17
PCCB-204ENST00000462637 CFAP74Q9C0B2 1584 aa22.37■■□□□ 1.17
PCCB-204ENST00000462637 TEX14Q8IWB6 1497 aa22.37■■□□□ 1.17
PCCB-204ENST00000462637 PKD2Q13563 968 aa22.37■■□□□ 1.17
PCCB-204ENST00000462637 SPAG9O60271 1321 aaKnown RBP22.36■■□□□ 1.17
PCCB-204ENST00000462637 RAPGEF3O95398 923 aa22.36■■□□□ 1.17
PCCB-204ENST00000462637 TSPOAP1O95153 1857 aa22.35■■□□□ 1.17
PCCB-204ENST00000462637 UNC13BO14795 1591 aa22.34■■□□□ 1.17
PCCB-204ENST00000462637 PPRC1Q5VV67 1664 aaKnown RBP22.34■■□□□ 1.17
PCCB-204ENST00000462637 ZFYVE16Q7Z3T8 1539 aa22.31■■□□□ 1.16
PCCB-204ENST00000462637 MYT1LQ9UL68 1186 aa22.31■■□□□ 1.16
PCCB-204ENST00000462637 POGZQ7Z3K3 1410 aa22.31■■□□□ 1.16
PCCB-204ENST00000462637 FAM135AQ9P2D6 1515 aa22.3■■□□□ 1.16
PCCB-204ENST00000462637 ZNF518AQ6AHZ1 1483 aa22.3■■□□□ 1.16
PCCB-204ENST00000462637 L3MBTL2Q969R5 705 aa22.28■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms