RNA–Protein interactions for RNA: ENST00000462323.5

MUC4-208, Transcript of mucin 4, cell surface associated, human

TSL 5

Gene MUC4, Length 16,197 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MUC4-208	ENST00000462323	CCDC9	Q9Y3X0	531 aa	Known RBP	7.45	□□□□□ -1.22
MUC4-208	ENST00000462323	KDM2A	Q9Y2K7	1162 aa		7.44	□□□□□ -1.22
MUC4-208	ENST00000462323	CARMIL1	Q5VZK9	1371 aa		7.44	□□□□□ -1.22
MUC4-208	ENST00000462323	B4GALNT3	Q6L9W6	998 aa		7.44	□□□□□ -1.22
MUC4-208	ENST00000462323	PTMA	P06454	111 aa	Known RBP	7.44	□□□□□ -1.22
MUC4-208	ENST00000462323	SAMD1	Q6SPF0	538 aa	Predicted RBP	7.44	□□□□□ -1.22
MUC4-208	ENST00000462323	MAP7D2	Q96T17	732 aa		7.44	□□□□□ -1.22
MUC4-208	ENST00000462323	TNNT3	P45378	269 aa	Predicted RBP	7.44	□□□□□ -1.22
MUC4-208	ENST00000462323	PAK3	O75914	559 aa	Predicted RBP	7.43	□□□□□ -1.22
MUC4-208	ENST00000462323	FHAD1	B1AJZ9	1412 aa		7.43	□□□□□ -1.22
MUC4-208	ENST00000462323	SECISBP2L	Q93073	1101 aa	Known RBP	7.43	□□□□□ -1.22
MUC4-208	ENST00000462323	CARD11	Q9BXL7	1154 aa		7.43	□□□□□ -1.22
MUC4-208	ENST00000462323	NACAD	O15069	1562 aa		7.43	□□□□□ -1.22
MUC4-208	ENST00000462323	PLEKHD1	A6NEE1	506 aa		7.43	□□□□□ -1.22
MUC4-208	ENST00000462323	DHX57	Q6P158	1386 aa	Known RBP	7.42	□□□□□ -1.22
MUC4-208	ENST00000462323	TCERG1	O14776	1098 aa	Known RBP	7.42	□□□□□ -1.22
MUC4-208	ENST00000462323	TPM2	P07951	284 aa		7.42	□□□□□ -1.22
MUC4-208	ENST00000462323	TAF3	Q5VWG9	929 aa		7.42	□□□□□ -1.22
MUC4-208	ENST00000462323	IRX3	P78415	501 aa	Predicted RBP	7.42	□□□□□ -1.22
MUC4-208	ENST00000462323	RALBP1	Q15311	655 aa		7.42	□□□□□ -1.22
MUC4-208	ENST00000462323	FBXO3	Q9UK99	471 aa		7.41	□□□□□ -1.22
MUC4-208	ENST00000462323	FAM13B	Q9NYF5	915 aa		7.41	□□□□□ -1.22
MUC4-208	ENST00000462323	RAB3GAP2	Q9H2M9	1393 aa		7.41	□□□□□ -1.22
MUC4-208	ENST00000462323	CFDP1	Q9UEE9	299 aa	Predicted RBP	7.41	□□□□□ -1.22
MUC4-208	ENST00000462323	PLCD4	Q9BRC7	762 aa		7.41	□□□□□ -1.22
MUC4-208	ENST00000462323	CCDC88B	A6NC98	1476 aa		7.41	□□□□□ -1.22
MUC4-208	ENST00000462323	STAC3	Q96MF2	364 aa		7.4	□□□□□ -1.22
MUC4-208	ENST00000462323	KNSTRN	Q9Y448	316 aa		7.4	□□□□□ -1.22
MUC4-208	ENST00000462323	ZFP91	Q96JP5	570 aa	Predicted RBP	7.4	□□□□□ -1.22
MUC4-208	ENST00000462323	PDE3B	Q13370	1112 aa		7.39	□□□□□ -1.23
MUC4-208	ENST00000462323	BAZ1A	Q9NRL2	1556 aa	Predicted RBP	7.39	□□□□□ -1.23
MUC4-208	ENST00000462323	TEX2	Q8IWB9	1127 aa		7.39	□□□□□ -1.23
MUC4-208	ENST00000462323	GRWD1	Q9BQ67	446 aa	Known RBP eCLIP	7.38	□□□□□ -1.23
MUC4-208	ENST00000462323	ZNF526	Q8TF50	670 aa	Predicted RBP	7.38	□□□□□ -1.23
MUC4-208	ENST00000462323	AXDND1	Q5T1B0	1012 aa	Predicted RBP	7.37	□□□□□ -1.23
MUC4-208	ENST00000462323	MPHOSPH9	Q99550	1183 aa		7.37	□□□□□ -1.23
MUC4-208	ENST00000462323	FRAT1	Q92837	279 aa	Predicted RBP	7.37	□□□□□ -1.23
MUC4-208	ENST00000462323	CHMP7	Q8WUX9	453 aa	Predicted RBP	7.36	□□□□□ -1.23
MUC4-208	ENST00000462323	MROH2B	Q7Z745	1585 aa		7.36	□□□□□ -1.23
MUC4-208	ENST00000462323	MTERF4	Q7Z6M4	381 aa	Known RBP	7.36	□□□□□ -1.23
MUC4-208	ENST00000462323	NUDC	Q9Y266	331 aa		7.36	□□□□□ -1.23
MUC4-208	ENST00000462323	RCAN3	Q9UKA8	241 aa		7.36	□□□□□ -1.23
MUC4-208	ENST00000462323	BAZ1B	Q9UIG0	1483 aa	Known RBP	7.36	□□□□□ -1.23
MUC4-208	ENST00000462323	OS9	Q13438	667 aa	Predicted RBP	7.36	□□□□□ -1.23
MUC4-208	ENST00000462323	HDAC5	Q9UQL6	1122 aa		7.35	□□□□□ -1.23
MUC4-208	ENST00000462323	GTF2E1	P29083	439 aa	Predicted RBP	7.35	□□□□□ -1.23
MUC4-208	ENST00000462323	CNKSR2	Q8WXI2	1034 aa		7.35	□□□□□ -1.23
MUC4-208	ENST00000462323	ZHX1	Q9UKY1	873 aa	Predicted RBP	7.35	□□□□□ -1.23
MUC4-208	ENST00000462323	GOLGA6L22	H0YM25	854 aa		7.35	□□□□□ -1.23
MUC4-208	ENST00000462323	MS4A1	P11836	297 aa		7.35	□□□□□ -1.23
MUC4-208	ENST00000462323	FAM193A	P78312	1265 aa		7.35	□□□□□ -1.23
MUC4-208	ENST00000462323	CFAP53	Q96M91	514 aa		7.34	□□□□□ -1.23
MUC4-208	ENST00000462323	KCNH8	Q96L42	1107 aa		7.34	□□□□□ -1.23
MUC4-208	ENST00000462323	L3MBTL2	Q969R5	705 aa		7.34	□□□□□ -1.23
MUC4-208	ENST00000462323	PRDM10	Q9NQV6	1147 aa		7.34	□□□□□ -1.23
MUC4-208	ENST00000462323	RGL3	Q3MIN7	710 aa		7.33	□□□□□ -1.24
MUC4-208	ENST00000462323	MYH16	Q9H6N6	1097 aa		7.33	□□□□□ -1.24
MUC4-208	ENST00000462323	CFAP44	Q96MT7	982 aa		7.33	□□□□□ -1.24
MUC4-208	ENST00000462323	PPP4R3B	Q5MIZ7	849 aa		7.32	□□□□□ -1.24
MUC4-208	ENST00000462323	TMF1	P82094	1093 aa		7.32	□□□□□ -1.24
MUC4-208	ENST00000462323	VGLL3	A8MV65	326 aa		7.32	□□□□□ -1.24
MUC4-208	ENST00000462323	GOLGA6L3	A6NEY3	463 aa		7.32	□□□□□ -1.24
MUC4-208	ENST00000462323	CHGA	P10645	457 aa	Known RBP	7.32	□□□□□ -1.24
MUC4-208	ENST00000462323	GTF3C5	Q9Y5Q8	519 aa	Predicted RBP	7.32	□□□□□ -1.24
MUC4-208	ENST00000462323	PKD2	Q13563	968 aa		7.31	□□□□□ -1.24
MUC4-208	ENST00000462323		E9PSI1	815 aa		7.31	□□□□□ -1.24
MUC4-208	ENST00000462323	ROCK2	O75116	1388 aa	Known RBP	7.31	□□□□□ -1.24
MUC4-208	ENST00000462323	ZBED9	Q6R2W3	1325 aa		7.31	□□□□□ -1.24
MUC4-208	ENST00000462323	MAPK8IP2	Q13387	824 aa	Predicted RBP	7.31	□□□□□ -1.24
MUC4-208	ENST00000462323	NLRP13	Q86W25	1043 aa		7.31	□□□□□ -1.24
MUC4-208	ENST00000462323	PRKRIP1	Q9H875	184 aa	Predicted RBP	7.3	□□□□□ -1.24
MUC4-208	ENST00000462323	TICAM2	Q86XR7	235 aa		7.3	□□□□□ -1.24
MUC4-208	ENST00000462323	CNPY4	Q8N129	248 aa		7.3	□□□□□ -1.24
MUC4-208	ENST00000462323	CALR	P27797	417 aa	Known RBP	7.29	□□□□□ -1.24
MUC4-208	ENST00000462323	DCAF11	Q8TEB1	546 aa		7.29	□□□□□ -1.24
MUC4-208	ENST00000462323	WASHC2A	Q641Q2	1341 aa		7.29	□□□□□ -1.24
MUC4-208	ENST00000462323	ARHGAP35	Q9NRY4	1499 aa		7.29	□□□□□ -1.24
MUC4-208	ENST00000462323	CC2D1B	Q5T0F9	858 aa	Known RBP	7.29	□□□□□ -1.24
MUC4-208	ENST00000462323	ARID3A	Q99856	593 aa		7.29	□□□□□ -1.24
MUC4-208	ENST00000462323	KTN1	Q86UP2	1357 aa	Known RBP	7.29	□□□□□ -1.24
MUC4-208	ENST00000462323	CUX2	O14529	1486 aa		7.29	□□□□□ -1.24
MUC4-208	ENST00000462323	SMAP1	Q8IYB5	467 aa	Predicted RBP	7.29	□□□□□ -1.24
MUC4-208	ENST00000462323	ZNF622	Q969S3	477 aa	Known RBP eCLIP	7.29	□□□□□ -1.24	3e-6	■■■□□ 16.3
MUC4-208	ENST00000462323	FMN1	Q68DA7	1419 aa		7.28	□□□□□ -1.24
MUC4-208	ENST00000462323	WASHC2C	Q9Y4E1	1318 aa		7.28	□□□□□ -1.24
MUC4-208	ENST00000462323	GTPBP4	Q9BZE4	634 aa	Known RBP	7.27	□□□□□ -1.25
MUC4-208	ENST00000462323	NFKBIB	Q15653	356 aa		7.27	□□□□□ -1.25
MUC4-208	ENST00000462323	KCNJ4	P48050	445 aa		7.27	□□□□□ -1.25
MUC4-208	ENST00000462323	RAPGEF2	Q9Y4G8	1499 aa		7.27	□□□□□ -1.25
MUC4-208	ENST00000462323	IGF1R	P08069	1367 aa		7.27	□□□□□ -1.25
MUC4-208	ENST00000462323	CLSTN1	O94985	981 aa		7.26	□□□□□ -1.25
MUC4-208	ENST00000462323	RWDD1	Q9H446	243 aa	Predicted RBP	7.26	□□□□□ -1.25
MUC4-208	ENST00000462323	SENP3-EIF4A1	A0A087X0R7	540 aa		7.26	□□□□□ -1.25
MUC4-208	ENST00000462323	PSMD1	Q99460	953 aa		7.26	□□□□□ -1.25
MUC4-208	ENST00000462323	FOXD1	Q16676	465 aa		7.26	□□□□□ -1.25
MUC4-208	ENST00000462323	PDE4A	P27815	886 aa		7.26	□□□□□ -1.25
MUC4-208	ENST00000462323	CASC1	Q6TDU7	716 aa		7.25	□□□□□ -1.25
MUC4-208	ENST00000462323	STAG3	Q9UJ98	1225 aa		7.25	□□□□□ -1.25
MUC4-208	ENST00000462323	ZNF771	Q7L3S4	317 aa	Predicted RBP	7.25	□□□□□ -1.25
MUC4-208	ENST00000462323	NPM1	P06748	294 aa	Known RBP eCLIP	7.24	□□□□□ -1.25

Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms