RNA–Protein interactions for RNA: ENST00000462289.1

VPS36-202, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 2

Gene VPS36, Length 544 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-202ENST00000462289 ATAD2BQ9ULI0 1458 aa10.84□□□□□ -0.67
VPS36-202ENST00000462289 SMARCA2P51531 1590 aa10.84□□□□□ -0.67
VPS36-202ENST00000462289 HMGXB3Q12766 1538 aa10.84□□□□□ -0.67
VPS36-202ENST00000462289 ECM2O94769 699 aaPredicted RBP10.83□□□□□ -0.68
VPS36-202ENST00000462289 G3V3G9 751 aa10.81□□□□□ -0.68
VPS36-202ENST00000462289 MS4A4AQ96JQ5 239 aa10.8□□□□□ -0.68
VPS36-202ENST00000462289 BCL11BQ9C0K0 894 aaPredicted RBP10.79□□□□□ -0.68
VPS36-202ENST00000462289 PHF8Q9UPP1 1060 aa10.77□□□□□ -0.69
VPS36-202ENST00000462289 RGL2O15211 777 aa10.76□□□□□ -0.69
VPS36-202ENST00000462289 RSF1Q96T23 1441 aaPredicted RBP10.75□□□□□ -0.69
VPS36-202ENST00000462289 MICALL2Q8IY33 904 aa10.75□□□□□ -0.69
VPS36-202ENST00000462289 FBXO22Q8NEZ5 403 aa10.74□□□□□ -0.69
VPS36-202ENST00000462289 STK24Q9Y6E0 443 aa10.74□□□□□ -0.69
VPS36-202ENST00000462289 STK25O00506 426 aa10.73□□□□□ -0.69
VPS36-202ENST00000462289 WIZO95785 1651 aa10.73□□□□□ -0.69
VPS36-202ENST00000462289 NLRP6P59044 892 aa10.72□□□□□ -0.69
VPS36-202ENST00000462289 CDAN1Q8IWY9 1227 aa10.72□□□□□ -0.69
VPS36-202ENST00000462289 MFRPQ9BY79 579 aa10.71□□□□□ -0.69
VPS36-202ENST00000462289 HOXB3P14651 431 aaPredicted RBP10.7□□□□□ -0.7
VPS36-202ENST00000462289 BAZ1BQ9UIG0 1483 aaKnown RBP10.69□□□□□ -0.7
VPS36-202ENST00000462289 TMEM92Q6UXU6 159 aa10.69□□□□□ -0.7
VPS36-202ENST00000462289 MARVELD3Q96A59 401 aa10.68□□□□□ -0.7
VPS36-202ENST00000462289 TOP2AP11388 1531 aaKnown RBP10.65□□□□□ -0.7
VPS36-202ENST00000462289 DOK7Q18PE1 504 aa10.63□□□□□ -0.71
VPS36-202ENST00000462289 EMP3P54852 163 aa10.62□□□□□ -0.71
VPS36-202ENST00000462289 HOXB1P14653 301 aaPredicted RBP10.6□□□□□ -0.71
VPS36-202ENST00000462289 POTEB3A0JP26 581 aa10.58□□□□□ -0.72
VPS36-202ENST00000462289 POTEBQ6S5H4 581 aa10.58□□□□□ -0.72
VPS36-202ENST00000462289 HS6ST3Q8IZP7 471 aa10.58□□□□□ -0.72
VPS36-202ENST00000462289 ZNF710Q8N1W2 664 aa10.58□□□□□ -0.72
VPS36-202ENST00000462289 HS3ST6Q96QI5 342 aa10.57□□□□□ -0.72
VPS36-202ENST00000462289 ZSWIM6Q9HCJ5 1215 aa10.57□□□□□ -0.72
VPS36-202ENST00000462289 RIMBP2O15034 1052 aa10.56□□□□□ -0.72
VPS36-202ENST00000462289 FAM205CA6NFA0 338 aa10.55□□□□□ -0.72
VPS36-202ENST00000462289 KIF3CO14782 793 aa10.55□□□□□ -0.72
VPS36-202ENST00000462289 LAMC3Q9Y6N6 1575 aa10.55□□□□□ -0.72
VPS36-202ENST00000462289 GPR153Q6NV75 609 aa10.52□□□□□ -0.73
VPS36-202ENST00000462289 DNAJC5Q9H3Z4 198 aa10.52□□□□□ -0.73
VPS36-202ENST00000462289 PPP1R37O75864 691 aa10.5□□□□□ -0.73
VPS36-202ENST00000462289 KRTAP3-3Q9BYR6 98 aa10.5□□□□□ -0.73
VPS36-202ENST00000462289 KRTAP3-2Q9BYR7 98 aa10.5□□□□□ -0.73
VPS36-202ENST00000462289 PRDM2Q13029 1718 aa10.5□□□□□ -0.73
VPS36-202ENST00000462289 C2orf72A6NCS6 295 aa10.49□□□□□ -0.73
VPS36-202ENST00000462289 CCDC88BA6NC98 1476 aa10.49□□□□□ -0.73
VPS36-202ENST00000462289 CFTRP13569 1480 aa10.49□□□□□ -0.73
VPS36-202ENST00000462289 NESP48681 1621 aa10.47□□□□□ -0.73
VPS36-202ENST00000462289 SPNS2Q8IVW8 549 aa10.47□□□□□ -0.73
VPS36-202ENST00000462289 CADPSQ9ULU8 1353 aa10.47□□□□□ -0.73
VPS36-202ENST00000462289 CHGAP10645 457 aaKnown RBP10.46□□□□□ -0.73
VPS36-202ENST00000462289 ERBB3P21860 1342 aa10.46□□□□□ -0.73
VPS36-202ENST00000462289 KIF21AQ7Z4S6 1674 aa10.42□□□□□ -0.74
VPS36-202ENST00000462289 SLC34A2O95436 690 aa10.42□□□□□ -0.74
VPS36-202ENST00000462289 MMRN1Q13201 1228 aa10.42□□□□□ -0.74
VPS36-202ENST00000462289 NKX1-1Q15270 411 aaPredicted RBP10.42□□□□□ -0.74
VPS36-202ENST00000462289 ARSIQ5FYB1 569 aa10.42□□□□□ -0.74
VPS36-202ENST00000462289 THOC2Q8NI27 1593 aaKnown RBP10.41□□□□□ -0.74
VPS36-202ENST00000462289 VARS2Q5ST30 1063 aaKnown RBP10.41□□□□□ -0.74
VPS36-202ENST00000462289 TMC2Q8TDI7 906 aa10.41□□□□□ -0.74
VPS36-202ENST00000462289 ZNF687Q8N1G0 1237 aa10.39□□□□□ -0.75
VPS36-202ENST00000462289 PDS5BQ9NTI5 1447 aa10.39□□□□□ -0.75
VPS36-202ENST00000462289 KHSRPQ92945 711 aaKnown RBP eCLIP10.37□□□□□ -0.75
VPS36-202ENST00000462289 RYDENQ9NUL5 291 aaKnown RBP10.37□□□□□ -0.75
VPS36-202ENST00000462289 ZNF316A6NFI3 1004 aaPredicted RBP10.35□□□□□ -0.75
VPS36-202ENST00000462289 FOXK1P85037 733 aa10.35□□□□□ -0.75
VPS36-202ENST00000462289 GPHNQ9NQX3 736 aaPredicted RBP10.34□□□□□ -0.75
VPS36-202ENST00000462289 PCDHGA4Q9Y5G9 962 aa10.34□□□□□ -0.75
VPS36-202ENST00000462289 FANCD2Q9BXW9 1451 aa10.34□□□□□ -0.75
VPS36-202ENST00000462289 WDR62O43379 1518 aa10.33□□□□□ -0.76
VPS36-202ENST00000462289 CUX2O14529 1486 aa10.33□□□□□ -0.76
VPS36-202ENST00000462289 ERCC6Q03468 1493 aa10.31□□□□□ -0.76
VPS36-202ENST00000462289 CEP164Q9UPV0 1460 aa10.31□□□□□ -0.76
VPS36-202ENST00000462289 NUDT7P0C024 238 aa10.31□□□□□ -0.76
VPS36-202ENST00000462289 MRC2Q9UBG0 1479 aa10.3□□□□□ -0.76
VPS36-202ENST00000462289 PTCD2Q8WV60 388 aaKnown RBP10.3□□□□□ -0.76
VPS36-202ENST00000462289 KDM4FA0A1W2PPD8 638 aa10.29□□□□□ -0.76
VPS36-202ENST00000462289 SUPT5HO00267 1087 aaKnown RBP10.28□□□□□ -0.76
VPS36-202ENST00000462289 GTPBP6O43824 516 aaPredicted RBP10.28□□□□□ -0.76
VPS36-202ENST00000462289 DSG2Q14126 1118 aa10.28□□□□□ -0.76
VPS36-202ENST00000462289 PLPP6Q8IY26 295 aa10.28□□□□□ -0.76
VPS36-202ENST00000462289 URB2Q14146 1524 aaKnown RBP10.28□□□□□ -0.76
VPS36-202ENST00000462289 CRISPLD2Q9H0B8 497 aa10.26□□□□□ -0.77
VPS36-202ENST00000462289 LHX6Q9UPM6 363 aa10.26□□□□□ -0.77
VPS36-202ENST00000462289 ABCC8Q09428 1581 aa10.23□□□□□ -0.77
VPS36-202ENST00000462289 DNMBPQ6XZF7 1577 aa10.23□□□□□ -0.77
VPS36-202ENST00000462289 PBX2P40425 430 aa10.22□□□□□ -0.77
VPS36-202ENST00000462289 TOPBP1Q92547 1522 aa10.22□□□□□ -0.77
VPS36-202ENST00000462289 PSDA5PKW4 1024 aaPredicted RBP10.21□□□□□ -0.77
VPS36-202ENST00000462289 POTEEQ6S8J3 1075 aa10.21□□□□□ -0.77
VPS36-202ENST00000462289 NCKAP5LQ9HCH0 1330 aa10.21□□□□□ -0.78
VPS36-202ENST00000462289 PTGER2P43116 358 aa10.2□□□□□ -0.78
VPS36-202ENST00000462289 LSM11P83369 360 aaKnown RBP eCLIP10.19□□□□□ -0.78
VPS36-202ENST00000462289 CUX1P39880 1505 aa10.18□□□□□ -0.78
VPS36-202ENST00000462289 TBC1D12O60347 775 aa10.18□□□□□ -0.78
VPS36-202ENST00000462289 OXER1Q8TDS5 423 aa10.18□□□□□ -0.78
VPS36-202ENST00000462289 BIVM-ERCC5R4GMW8 1640 aa10.18□□□□□ -0.78
VPS36-202ENST00000462289 PDE4AP27815 886 aa10.17□□□□□ -0.78
VPS36-202ENST00000462289 PPP1R15BQ5SWA1 713 aa10.17□□□□□ -0.78
VPS36-202ENST00000462289 TARBP1Q13395 1621 aaKnown RBP10.17□□□□□ -0.78
VPS36-202ENST00000462289 RNF166Q96A37 237 aaPredicted RBP10.16□□□□□ -0.78
VPS36-202ENST00000462289 MYT1LQ9UL68 1186 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms