RNA–Protein interactions for RNA: ENST00000461869.5

SF3A3-203, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 3

Gene SF3A3, Length 776 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-203ENST00000461869 UBTFP17480 764 aaKnown RBP25.32■■□□□ 1.64
SF3A3-203ENST00000461869 MLECQ14165 292 aa25.31■■□□□ 1.64
SF3A3-203ENST00000461869 HECW1Q76N89 1606 aa25.3■■□□□ 1.64
SF3A3-203ENST00000461869 HSPA2P54652 639 aa25.3■■□□□ 1.64
SF3A3-203ENST00000461869 SIGLEC1Q9BZZ2 1709 aa25.28■■□□□ 1.64
SF3A3-203ENST00000461869 FMN1Q68DA7 1419 aa25.28■■□□□ 1.64
SF3A3-203ENST00000461869 EFCAB2Q5VUJ9 269 aa25.26■■□□□ 1.63
SF3A3-203ENST00000461869 CDK11AQ9UQ88 783 aaPredicted RBP25.26■■□□□ 1.63
SF3A3-203ENST00000461869 ATP10AO60312 1499 aa25.22■■□□□ 1.63
SF3A3-203ENST00000461869 ARHGAP35Q9NRY4 1499 aa25.21■■□□□ 1.63
SF3A3-203ENST00000461869 FER1L4A9Z1Z3 1794 aa25.19■■□□□ 1.62
SF3A3-203ENST00000461869 C9orf84Q5VXU9 1444 aa25.19■■□□□ 1.62
SF3A3-203ENST00000461869 MYO5CQ9NQX4 1742 aa25.18■■□□□ 1.62
SF3A3-203ENST00000461869 TROQ12816 1431 aaPredicted RBP25.15■■□□□ 1.62
SF3A3-203ENST00000461869 ARHGEF12Q9NZN5 1544 aa25.15■■□□□ 1.62
SF3A3-203ENST00000461869 KIF14Q15058 1648 aa25.15■■□□□ 1.62
SF3A3-203ENST00000461869 AFAP1Q8N556 730 aa25.14■■□□□ 1.62
SF3A3-203ENST00000461869 MYT1LQ9UL68 1186 aa25.13■■□□□ 1.61
SF3A3-203ENST00000461869 ZNF518AQ6AHZ1 1483 aa25.13■■□□□ 1.61
SF3A3-203ENST00000461869 CLIP1P30622 1438 aa25.12■■□□□ 1.61
SF3A3-203ENST00000461869 ARHGAP5Q13017 1502 aa25.12■■□□□ 1.61
SF3A3-203ENST00000461869 CEBPAP49715 358 aaPredicted RBP25.11■■□□□ 1.61
SF3A3-203ENST00000461869 CERKQ8TCT0 537 aa25.1■■□□□ 1.61
SF3A3-203ENST00000461869 KDM5CP41229 1560 aa25.06■■□□□ 1.6
SF3A3-203ENST00000461869 PREX1Q8TCU6 1659 aa25.04■■□□□ 1.6
SF3A3-203ENST00000461869 LRRIQ1Q96JM4 1722 aa25.03■■□□□ 1.6
SF3A3-203ENST00000461869 DIP2CQ9Y2E4 1556 aa25.01■■□□□ 1.59
SF3A3-203ENST00000461869 MLH3Q9UHC1 1453 aa24.99■■□□□ 1.59
SF3A3-203ENST00000461869 CDC42BPBQ9Y5S2 1711 aa24.98■■□□□ 1.59
SF3A3-203ENST00000461869 DMRT2Q9Y5R5 561 aa24.98■■□□□ 1.59
SF3A3-203ENST00000461869 UHRF1BP1Q6BDS2 1440 aa24.97■■□□□ 1.59
SF3A3-203ENST00000461869 REREQ9P2R6 1566 aa24.97■■□□□ 1.59
SF3A3-203ENST00000461869 CASKIN1Q8WXD9 1431 aa24.96■■□□□ 1.59
SF3A3-203ENST00000461869 TRAPPC8Q9Y2L5 1435 aa24.96■■□□□ 1.59
SF3A3-203ENST00000461869 CCDC18Q5T9S5 1454 aa24.96■■□□□ 1.59
SF3A3-203ENST00000461869 ESF1Q9H501 851 aaKnown RBP24.95■■□□□ 1.58
SF3A3-203ENST00000461869 PREX2Q70Z35 1606 aa24.94■■□□□ 1.58
SF3A3-203ENST00000461869 ABCA6Q8N139 1617 aa24.94■■□□□ 1.58
SF3A3-203ENST00000461869 ABCC1P33527 1531 aa24.94■■□□□ 1.58
SF3A3-203ENST00000461869 AGLP35573 1532 aa24.91■■□□□ 1.58
SF3A3-203ENST00000461869 STRCQ7RTU9 1775 aa24.9■■□□□ 1.58
SF3A3-203ENST00000461869 SETD1BQ9UPS6 1966 aaKnown RBP24.89■■□□□ 1.57
SF3A3-203ENST00000461869 ITSN2Q9NZM3 1697 aa24.88■■□□□ 1.57
SF3A3-203ENST00000461869 C3P01024 1663 aa24.88■■□□□ 1.57
SF3A3-203ENST00000461869 ZNF777Q9ULD5 760 aaPredicted RBP24.87■■□□□ 1.57
SF3A3-203ENST00000461869 KIDINS220Q9ULH0 1771 aa24.84■■□□□ 1.57
SF3A3-203ENST00000461869 CDC42BPAQ5VT25 1732 aa24.83■■□□□ 1.57
SF3A3-203ENST00000461869 CNTLNQ9NXG0 1405 aa24.83■■□□□ 1.57
SF3A3-203ENST00000461869 FYCO1Q9BQS8 1478 aa24.83■■□□□ 1.56
SF3A3-203ENST00000461869 PTPRTO14522 1441 aa24.82■■□□□ 1.56
SF3A3-203ENST00000461869 SAMD9LQ8IVG5 1584 aa24.8■■□□□ 1.56
SF3A3-203ENST00000461869 HNRNPMP52272 730 aaKnown RBP eCLIP24.79■■□□□ 1.56
SF3A3-203ENST00000461869 SPAG9O60271 1321 aaKnown RBP24.79■■□□□ 1.56
SF3A3-203ENST00000461869 GPATCH8Q9UKJ3 1502 aaKnown RBP24.78■■□□□ 1.56
SF3A3-203ENST00000461869 SYCP2Q9BX26 1530 aa24.76■■□□□ 1.55
SF3A3-203ENST00000461869 CFDP1Q9UEE9 299 aaPredicted RBP24.74■■□□□ 1.55
SF3A3-203ENST00000461869 ZMYM3Q14202 1370 aa24.74■■□□□ 1.55
SF3A3-203ENST00000461869 NCOA1Q15788 1441 aa24.73■■□□□ 1.55
SF3A3-203ENST00000461869 NPATQ14207 1427 aa24.72■■□□□ 1.55
SF3A3-203ENST00000461869 KIAA1107Q9UPP5 1409 aa24.7■■□□□ 1.55
SF3A3-203ENST00000461869 CCNB3Q8WWL7 1395 aa24.7■■□□□ 1.55
SF3A3-203ENST00000461869 LOC105371045A0A1W2PR82 267 aa24.7■■□□□ 1.54
SF3A3-203ENST00000461869 DISP3Q9P2K9 1392 aa24.69■■□□□ 1.54
SF3A3-203ENST00000461869 MROH2AA6NES4 1674 aa24.69■■□□□ 1.54
SF3A3-203ENST00000461869 PLEKHH2Q8IVE3 1493 aa24.69■■□□□ 1.54
SF3A3-203ENST00000461869 SUPT6HQ7KZ85 1726 aaKnown RBP24.69■■□□□ 1.54
SF3A3-203ENST00000461869 ATP7AQ04656 1500 aa24.68■■□□□ 1.54
SF3A3-203ENST00000461869 LTBP4Q8N2S1 1624 aa24.68■■□□□ 1.54
SF3A3-203ENST00000461869 CAMSAP1Q5T5Y3 1602 aa24.67■■□□□ 1.54
SF3A3-203ENST00000461869 A2MP01023 1474 aa24.66■■□□□ 1.54
SF3A3-203ENST00000461869 MTUS2Q5JR59 1369 aa24.66■■□□□ 1.54
SF3A3-203ENST00000461869 GGT6Q6P531 493 aa24.65■■□□□ 1.54
SF3A3-203ENST00000461869 NCKAP5LQ9HCH0 1330 aa24.63■■□□□ 1.53
SF3A3-203ENST00000461869 INO80Q9ULG1 1556 aaPredicted RBP24.63■■□□□ 1.53
SF3A3-203ENST00000461869 PLXNC1O60486 1568 aa24.63■■□□□ 1.53
SF3A3-203ENST00000461869 CLTCQ00610 1675 aaKnown RBP24.62■■□□□ 1.53
SF3A3-203ENST00000461869 ILDR2Q71H61 639 aa24.61■■□□□ 1.53
SF3A3-203ENST00000461869 IQSEC2Q5JU85 1478 aa24.61■■□□□ 1.53
SF3A3-203ENST00000461869 PTPRKQ15262 1439 aa24.59■■□□□ 1.53
SF3A3-203ENST00000461869 ZNF644Q9H582 1327 aaPredicted RBP24.59■■□□□ 1.53
SF3A3-203ENST00000461869 PPP6R1Q9UPN7 881 aa24.58■■□□□ 1.53
SF3A3-203ENST00000461869 PKD2Q13563 968 aa24.57■■□□□ 1.52
SF3A3-203ENST00000461869 ZNF335Q9H4Z2 1342 aaPredicted RBP24.56■■□□□ 1.52
SF3A3-203ENST00000461869 MYO3AQ8NEV4 1616 aa24.55■■□□□ 1.52
SF3A3-203ENST00000461869 PLA2R1Q13018 1463 aa24.54■■□□□ 1.52
SF3A3-203ENST00000461869 TIAM1Q13009 1591 aa24.53■■□□□ 1.52
SF3A3-203ENST00000461869 CEP170BQ9Y4F5 1589 aaPredicted RBP24.53■■□□□ 1.52
SF3A3-203ENST00000461869 ZNF142P52746 1687 aaPredicted RBP24.53■■□□□ 1.52
SF3A3-203ENST00000461869 ADGBQ8N7X0 1667 aa24.53■■□□□ 1.52
SF3A3-203ENST00000461869 MBD5Q9P267 1494 aa24.52■■□□□ 1.52
SF3A3-203ENST00000461869 SOCS7O14512 581 aa24.51■■□□□ 1.51
SF3A3-203ENST00000461869 RTEL1-TNFRSF6BF6WH68 1400 aa24.5■■□□□ 1.51
SF3A3-203ENST00000461869 TCOF1Q13428 1488 aaKnown RBP24.5■■□□□ 1.51
SF3A3-203ENST00000461869 EHBP1L1Q8N3D4 1523 aa24.5■■□□□ 1.51
SF3A3-203ENST00000461869 SPATA31D1Q6ZQQ2 1576 aa24.5■■□□□ 1.51
SF3A3-203ENST00000461869 UBAP1LF5GYI3 381 aa24.48■■□□□ 1.51
SF3A3-203ENST00000461869 DHX29Q7Z478 1369 aaKnown RBP24.48■■□□□ 1.51
SF3A3-203ENST00000461869 CEP162Q5TB80 1403 aa24.47■■□□□ 1.51
SF3A3-203ENST00000461869 A2ML1A8K2U0 1454 aa24.45■■□□□ 1.5
SF3A3-203ENST00000461869 KIF3BO15066 747 aa24.44■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms