RNA–Protein interactions for RNA: ENST00000461228.1

DNMT3A-207, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 5

Gene DNMT3A, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-207ENST00000461228 ARHGAP35Q9NRY4 1499 aa24.38■■□□□ 1.49
DNMT3A-207ENST00000461228 YEATS2Q9ULM3 1422 aa24.38■■□□□ 1.49
DNMT3A-207ENST00000461228 ZNF518AQ6AHZ1 1483 aa24.36■■□□□ 1.49
DNMT3A-207ENST00000461228 LRRIQ1Q96JM4 1722 aa24.35■■□□□ 1.49
DNMT3A-207ENST00000461228 PREX1Q8TCU6 1659 aa24.35■■□□□ 1.49
DNMT3A-207ENST00000461228 C9orf84Q5VXU9 1444 aa24.35■■□□□ 1.49
DNMT3A-207ENST00000461228 FBXO41Q8TF61 875 aa24.34■■□□□ 1.49
DNMT3A-207ENST00000461228 ARID4BQ4LE39 1312 aaPredicted RBP24.34■■□□□ 1.49
DNMT3A-207ENST00000461228 TROQ12816 1431 aaPredicted RBP24.32■■□□□ 1.48
DNMT3A-207ENST00000461228 SCAPERQ9BY12 1400 aa24.32■■□□□ 1.48
DNMT3A-207ENST00000461228 PREX2Q70Z35 1606 aa24.32■■□□□ 1.48
DNMT3A-207ENST00000461228 ATP10AO60312 1499 aa24.31■■□□□ 1.48
DNMT3A-207ENST00000461228 CLIP1P30622 1438 aa24.29■■□□□ 1.48
DNMT3A-207ENST00000461228 CDC42BPBQ9Y5S2 1711 aa24.27■■□□□ 1.48
DNMT3A-207ENST00000461228 CCDC18Q5T9S5 1454 aa24.27■■□□□ 1.48
DNMT3A-207ENST00000461228 DIP2CQ9Y2E4 1556 aa24.26■■□□□ 1.47
DNMT3A-207ENST00000461228 CDK11AQ9UQ88 783 aaPredicted RBP24.25■■□□□ 1.47
DNMT3A-207ENST00000461228 ARHGAP5Q13017 1502 aa24.25■■□□□ 1.47
DNMT3A-207ENST00000461228 ABCC1P33527 1531 aa24.24■■□□□ 1.47
DNMT3A-207ENST00000461228 ITSN2Q9NZM3 1697 aa24.23■■□□□ 1.47
DNMT3A-207ENST00000461228 ABCA6Q8N139 1617 aa24.21■■□□□ 1.47
DNMT3A-207ENST00000461228 AGLP35573 1532 aa24.21■■□□□ 1.47
DNMT3A-207ENST00000461228 MLH3Q9UHC1 1453 aa24.21■■□□□ 1.47
DNMT3A-207ENST00000461228 RANGAP1P46060 587 aaPredicted RBP24.21■■□□□ 1.47
DNMT3A-207ENST00000461228 EFCAB2Q5VUJ9 269 aa24.21■■□□□ 1.47
DNMT3A-207ENST00000461228 SETD1BQ9UPS6 1966 aaKnown RBP24.18■■□□□ 1.46
DNMT3A-207ENST00000461228 CASKIN1Q8WXD9 1431 aa24.18■■□□□ 1.46
DNMT3A-207ENST00000461228 CDC42BPAQ5VT25 1732 aa24.17■■□□□ 1.46
DNMT3A-207ENST00000461228 FYCO1Q9BQS8 1478 aa24.16■■□□□ 1.46
DNMT3A-207ENST00000461228 C3P01024 1663 aa24.12■■□□□ 1.45
DNMT3A-207ENST00000461228 MROH2AA6NES4 1674 aa24.11■■□□□ 1.45
DNMT3A-207ENST00000461228 KIDINS220Q9ULH0 1771 aa24.11■■□□□ 1.45
DNMT3A-207ENST00000461228 UBTFP17480 764 aaKnown RBP24.1■■□□□ 1.45
DNMT3A-207ENST00000461228 STRCQ7RTU9 1775 aa24.1■■□□□ 1.45
DNMT3A-207ENST00000461228 UHRF1BP1Q6BDS2 1440 aa24.07■■□□□ 1.44
DNMT3A-207ENST00000461228 CNTLNQ9NXG0 1405 aa24.04■■□□□ 1.44
DNMT3A-207ENST00000461228 HSPA2P54652 639 aa24.03■■□□□ 1.44
DNMT3A-207ENST00000461228 SAMD9LQ8IVG5 1584 aa24.03■■□□□ 1.44
DNMT3A-207ENST00000461228 PLXNC1O60486 1568 aa24.02■■□□□ 1.44
DNMT3A-207ENST00000461228 INO80Q9ULG1 1556 aaPredicted RBP24.02■■□□□ 1.44
DNMT3A-207ENST00000461228 TRAPPC8Q9Y2L5 1435 aa24■■□□□ 1.43
DNMT3A-207ENST00000461228 CHIC1Q5VXU3 224 aa23.99■■□□□ 1.43
DNMT3A-207ENST00000461228 ZNF142P52746 1687 aaPredicted RBP23.98■■□□□ 1.43
DNMT3A-207ENST00000461228 MLECQ14165 292 aa23.97■■□□□ 1.43
DNMT3A-207ENST00000461228 PLEKHH2Q8IVE3 1493 aa23.97■■□□□ 1.43
DNMT3A-207ENST00000461228 SYCP2Q9BX26 1530 aa23.97■■□□□ 1.43
DNMT3A-207ENST00000461228 PTPRTO14522 1441 aa23.96■■□□□ 1.43
DNMT3A-207ENST00000461228 NPATQ14207 1427 aa23.96■■□□□ 1.43
DNMT3A-207ENST00000461228 AFAP1Q8N556 730 aa23.96■■□□□ 1.43
DNMT3A-207ENST00000461228 IQSEC2Q5JU85 1478 aa23.95■■□□□ 1.42
DNMT3A-207ENST00000461228 KIAA1107Q9UPP5 1409 aa23.94■■□□□ 1.42
DNMT3A-207ENST00000461228 ATP1B4Q9UN42 357 aaPredicted RBP23.94■■□□□ 1.42
DNMT3A-207ENST00000461228 DMRT2Q9Y5R5 561 aa23.94■■□□□ 1.42
DNMT3A-207ENST00000461228 ATP7AQ04656 1500 aa23.94■■□□□ 1.42
DNMT3A-207ENST00000461228 CERKQ8TCT0 537 aa23.93■■□□□ 1.42
DNMT3A-207ENST00000461228 GPATCH8Q9UKJ3 1502 aaKnown RBP23.92■■□□□ 1.42
DNMT3A-207ENST00000461228 ADGBQ8N7X0 1667 aa23.91■■□□□ 1.42
DNMT3A-207ENST00000461228 NCOA1Q15788 1441 aa23.88■■□□□ 1.41
DNMT3A-207ENST00000461228 MYO3AQ8NEV4 1616 aa23.87■■□□□ 1.41
DNMT3A-207ENST00000461228 EHBP1L1Q8N3D4 1523 aa23.86■■□□□ 1.41
DNMT3A-207ENST00000461228 FAM135AQ9P2D6 1515 aa23.86■■□□□ 1.41
DNMT3A-207ENST00000461228 LTBP4Q8N2S1 1624 aa23.84■■□□□ 1.41
DNMT3A-207ENST00000461228 SUPT6HQ7KZ85 1726 aaKnown RBP23.84■■□□□ 1.41
DNMT3A-207ENST00000461228 TIAM1Q13009 1591 aa23.83■■□□□ 1.41
DNMT3A-207ENST00000461228 CEBPAP49715 358 aaPredicted RBP23.83■■□□□ 1.41
DNMT3A-207ENST00000461228 CLTCQ00610 1675 aaKnown RBP23.83■■□□□ 1.4
DNMT3A-207ENST00000461228 PLA2R1Q13018 1463 aa23.82■■□□□ 1.4
DNMT3A-207ENST00000461228 PLPPR3Q6T4P5 718 aa23.82■■□□□ 1.4
DNMT3A-207ENST00000461228 A2MP01023 1474 aa23.8■■□□□ 1.4
DNMT3A-207ENST00000461228 CEP170BQ9Y4F5 1589 aaPredicted RBP23.78■■□□□ 1.4
DNMT3A-207ENST00000461228 CAMSAP1Q5T5Y3 1602 aa23.78■■□□□ 1.4
DNMT3A-207ENST00000461228 ESF1Q9H501 851 aaKnown RBP23.78■■□□□ 1.4
DNMT3A-207ENST00000461228 MYT1LQ9UL68 1186 aa23.77■■□□□ 1.4
DNMT3A-207ENST00000461228 SPAG9O60271 1321 aaKnown RBP23.76■■□□□ 1.39
DNMT3A-207ENST00000461228 EHMT2Q96KQ7 1210 aa23.75■■□□□ 1.39
DNMT3A-207ENST00000461228 CCNB3Q8WWL7 1395 aa23.74■■□□□ 1.39
DNMT3A-207ENST00000461228 RTEL1-TNFRSF6BF6WH68 1400 aa23.74■■□□□ 1.39
DNMT3A-207ENST00000461228 CEP162Q5TB80 1403 aa23.74■■□□□ 1.39
DNMT3A-207ENST00000461228 TCOF1Q13428 1488 aaKnown RBP23.74■■□□□ 1.39
DNMT3A-207ENST00000461228 MTUS2Q5JR59 1369 aa23.72■■□□□ 1.39
DNMT3A-207ENST00000461228 MBD5Q9P267 1494 aa23.71■■□□□ 1.39
DNMT3A-207ENST00000461228 ZMYM3Q14202 1370 aa23.71■■□□□ 1.39
DNMT3A-207ENST00000461228 PPP6R1Q9UPN7 881 aa23.71■■□□□ 1.39
DNMT3A-207ENST00000461228 PTPRKQ15262 1439 aa23.7■■□□□ 1.38
DNMT3A-207ENST00000461228 POLR1AO95602 1720 aaPredicted RBP23.68■■□□□ 1.38
DNMT3A-207ENST00000461228 SPATA31D1Q6ZQQ2 1576 aa23.68■■□□□ 1.38
DNMT3A-207ENST00000461228 CFDP1Q9UEE9 299 aaPredicted RBP23.67■■□□□ 1.38
DNMT3A-207ENST00000461228 KDM5DQ9BY66 1539 aa23.65■■□□□ 1.38
DNMT3A-207ENST00000461228 CCDC141Q6ZP82 1450 aa23.64■■□□□ 1.38
DNMT3A-207ENST00000461228 ARHGEF5Q12774 1597 aa23.64■■□□□ 1.37
DNMT3A-207ENST00000461228 A2ML1A8K2U0 1454 aa23.62■■□□□ 1.37
DNMT3A-207ENST00000461228 DNMT1P26358 1616 aaKnown RBP23.62■■□□□ 1.37
DNMT3A-207ENST00000461228 ZNF777Q9ULD5 760 aaPredicted RBP23.61■■□□□ 1.37
DNMT3A-207ENST00000461228 ZC3H13Q5T200 1668 aaKnown RBP23.6■■□□□ 1.37
DNMT3A-207ENST00000461228 HNRNPMP52272 730 aaKnown RBP eCLIP23.59■■□□□ 1.37
DNMT3A-207ENST00000461228 PKD2Q13563 968 aa23.59■■□□□ 1.37
DNMT3A-207ENST00000461228 PZPP20742 1482 aa23.59■■□□□ 1.37
DNMT3A-207ENST00000461228 CAMSAP2Q08AD1 1489 aa23.58■■□□□ 1.37
DNMT3A-207ENST00000461228 RNF17Q9BXT8 1623 aaKnown RBP23.58■■□□□ 1.36
DNMT3A-207ENST00000461228 DHX29Q7Z478 1369 aaKnown RBP23.56■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms