RNA–Protein interactions for RNA: ENST00000461115.5

IFT88-204, Transcript of intraflagellar transport 88, humanhuman

TSL 2

Gene IFT88, Length 1,440 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-204ENST00000461115 SETD5Q9C0A6 1442 aa16.22■□□□□ 0.19
IFT88-204ENST00000461115 TROQ12816 1431 aaPredicted RBP16.21■□□□□ 0.19
IFT88-204ENST00000461115 CDK11AQ9UQ88 783 aaPredicted RBP16.19■□□□□ 0.18
IFT88-204ENST00000461115 RAB3GAP2Q9H2M9 1393 aa16.18■□□□□ 0.18
IFT88-204ENST00000461115 AKNAQ7Z591 1439 aa16.17■□□□□ 0.18
IFT88-204ENST00000461115 HFM1A2PYH4 1435 aa16.16■□□□□ 0.18
IFT88-204ENST00000461115 PTPRGP23470 1445 aa16.16■□□□□ 0.18
IFT88-204ENST00000461115 PTPRKQ15262 1439 aa16.16■□□□□ 0.18
IFT88-204ENST00000461115 TRHP20396 242 aaPredicted RBP16.16■□□□□ 0.18
IFT88-204ENST00000461115 FAM50AQ14320 339 aaKnown RBP16.16■□□□□ 0.18
IFT88-204ENST00000461115 ATP10BO94823 1461 aa16.16■□□□□ 0.18
IFT88-204ENST00000461115 ITSN2Q9NZM3 1697 aa16.15■□□□□ 0.18
IFT88-204ENST00000461115 MYCNP04198 464 aaPredicted RBP16.15■□□□□ 0.18
IFT88-204ENST00000461115 GCC2Q8IWJ2 1684 aa16.12■□□□□ 0.17
IFT88-204ENST00000461115 UACAQ9BZF9 1416 aa16.12■□□□□ 0.17
IFT88-204ENST00000461115 ZNF219Q9P2Y4 722 aaPredicted RBP16.11■□□□□ 0.17
IFT88-204ENST00000461115 DNMT1P26358 1616 aaKnown RBP16.1■□□□□ 0.17
IFT88-204ENST00000461115 KIF14Q15058 1648 aa16.1■□□□□ 0.17
IFT88-204ENST00000461115 ABCC10Q5T3U5 1492 aa16.1■□□□□ 0.17
IFT88-204ENST00000461115 ERCC6L2Q5T890 1561 aa16.1■□□□□ 0.17
IFT88-204ENST00000461115 MAPKBP1O60336 1514 aa16.1■□□□□ 0.17
IFT88-204ENST00000461115 DSG3P32926 999 aa16.1■□□□□ 0.17
IFT88-204ENST00000461115 UHRF1BP1LA0JNW5 1464 aa16.09■□□□□ 0.17
IFT88-204ENST00000461115 NAIPQ13075 1403 aa16.09■□□□□ 0.17
IFT88-204ENST00000461115 ABCC2Q92887 1545 aa16.09■□□□□ 0.17
IFT88-204ENST00000461115 GPATCH8Q9UKJ3 1502 aaKnown RBP16.09■□□□□ 0.17
IFT88-204ENST00000461115 FOXD4L1Q9NU39 408 aa16.09■□□□□ 0.17
IFT88-204ENST00000461115 ITGAEP38570 1179 aa16.08■□□□□ 0.16
IFT88-204ENST00000461115 CDC42BPAQ5VT25 1732 aa16.08■□□□□ 0.16
IFT88-204ENST00000461115 ROCK1Q13464 1354 aa16.06■□□□□ 0.16
IFT88-204ENST00000461115 ACIN1Q9UKV3 1341 aaKnown RBP16.04■□□□□ 0.16
IFT88-204ENST00000461115 PLEKHD1A6NEE1 506 aa16.03■□□□□ 0.16
IFT88-204ENST00000461115 DAPK1P53355 1430 aa16.03■□□□□ 0.16
IFT88-204ENST00000461115 ABCC5O15440 1437 aa16.02■□□□□ 0.15
IFT88-204ENST00000461115 CROCC2H7BZ55 1655 aa16.02■□□□□ 0.15
IFT88-204ENST00000461115 KDM5BQ9UGL1 1544 aa16.02■□□□□ 0.15
IFT88-204ENST00000461115 CAMSAP2Q08AD1 1489 aa16.01■□□□□ 0.15
IFT88-204ENST00000461115 ARID3CA6NKF2 412 aa16.01■□□□□ 0.15
IFT88-204ENST00000461115 ADGRL2O95490 1459 aa15.99■□□□□ 0.15
IFT88-204ENST00000461115 PREX2Q70Z35 1606 aa15.99■□□□□ 0.15
IFT88-204ENST00000461115 ADGBQ8N7X0 1667 aa15.98■□□□□ 0.15
IFT88-204ENST00000461115 TIMELESSQ9UNS1 1208 aa15.97■□□□□ 0.15
IFT88-204ENST00000461115 CDC42BPBQ9Y5S2 1711 aa15.97■□□□□ 0.15
IFT88-204ENST00000461115 ZCCHC11Q5TAX3 1644 aaKnown RBP15.96■□□□□ 0.15
IFT88-204ENST00000461115 ARHGEF5Q12774 1597 aa15.96■□□□□ 0.15
IFT88-204ENST00000461115 SHANK2Q9UPX8 1470 aa15.96■□□□□ 0.15
IFT88-204ENST00000461115 CFDP1Q9UEE9 299 aaPredicted RBP15.95■□□□□ 0.14
IFT88-204ENST00000461115 ABCB7O75027 752 aa15.94■□□□□ 0.14
IFT88-204ENST00000461115 ZNF644Q9H582 1327 aaPredicted RBP15.93■□□□□ 0.14
IFT88-204ENST00000461115 KDM6BO15054 1643 aa15.92■□□□□ 0.14
IFT88-204ENST00000461115 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.92■□□□□ 0.14
IFT88-204ENST00000461115 NCOA1Q15788 1441 aa15.92■□□□□ 0.14
IFT88-204ENST00000461115 MYO5CQ9NQX4 1742 aa15.9■□□□□ 0.14
IFT88-204ENST00000461115 MBD5Q9P267 1494 aa15.9■□□□□ 0.14
IFT88-204ENST00000461115 TTC37Q6PGP7 1564 aa15.9■□□□□ 0.14
IFT88-204ENST00000461115 DENND4BO75064 1496 aaPredicted RBP15.89■□□□□ 0.13
IFT88-204ENST00000461115 SAMD9LQ8IVG5 1584 aa15.89■□□□□ 0.13
IFT88-204ENST00000461115 ARAP3Q8WWN8 1544 aa15.89■□□□□ 0.13
IFT88-204ENST00000461115 ZNF316A6NFI3 1004 aaPredicted RBP15.88■□□□□ 0.13
IFT88-204ENST00000461115 OSCARQ8IYS5 282 aa15.87■□□□□ 0.13
IFT88-204ENST00000461115 MAST1Q9Y2H9 1570 aa15.87■□□□□ 0.13
IFT88-204ENST00000461115 RSPH4AQ5TD94 716 aa15.86■□□□□ 0.13
IFT88-204ENST00000461115 KIAA1107Q9UPP5 1409 aa15.86■□□□□ 0.13
IFT88-204ENST00000461115 RRP7BPQ9NSQ0 103 aa15.85■□□□□ 0.13
IFT88-204ENST00000461115 PLEKHH2Q8IVE3 1493 aa15.85■□□□□ 0.13
IFT88-204ENST00000461115 CHIC2Q9UKJ5 165 aa15.85■□□□□ 0.13
IFT88-204ENST00000461115 ANKRD30AQ9BXX3 1397 aa15.83■□□□□ 0.12
IFT88-204ENST00000461115 PLCH2O75038 1416 aa15.83■□□□□ 0.12
IFT88-204ENST00000461115 CCDC141Q6ZP82 1450 aa15.82■□□□□ 0.12
IFT88-204ENST00000461115 C9orf84Q5VXU9 1444 aa15.81■□□□□ 0.12
IFT88-204ENST00000461115 KDM5DQ9BY66 1539 aa15.8■□□□□ 0.12
IFT88-204ENST00000461115 ABCA9Q8IUA7 1624 aa15.8■□□□□ 0.12
IFT88-204ENST00000461115 WDR7Q9Y4E6 1490 aa15.79■□□□□ 0.12
IFT88-204ENST00000461115 ARHGAP5Q13017 1502 aa15.78■□□□□ 0.12
IFT88-204ENST00000461115 PLXNC1O60486 1568 aa15.78■□□□□ 0.12
IFT88-204ENST00000461115 ZBTB22O15209 634 aa15.77■□□□□ 0.12
IFT88-204ENST00000461115 SIN3AQ96ST3 1273 aa15.77■□□□□ 0.12
IFT88-204ENST00000461115 PZPP20742 1482 aa15.77■□□□□ 0.12
IFT88-204ENST00000461115 MPHOSPH9Q99550 1183 aa15.77■□□□□ 0.11
IFT88-204ENST00000461115 ZNF777Q9ULD5 760 aaPredicted RBP15.77■□□□□ 0.11
IFT88-204ENST00000461115 ANKRD50Q9ULJ7 1429 aa15.76■□□□□ 0.11
IFT88-204ENST00000461115 SYCP2Q9BX26 1530 aa15.76■□□□□ 0.11
IFT88-204ENST00000461115 ABCC1P33527 1531 aa15.75■□□□□ 0.11
IFT88-204ENST00000461115 PPP1R15AO75807 674 aaPredicted RBP15.75■□□□□ 0.11
IFT88-204ENST00000461115 POLA2Q14181 598 aa15.75■□□□□ 0.11
IFT88-204ENST00000461115 ANKRD30BQ9BXX2 1392 aa15.74■□□□□ 0.11
IFT88-204ENST00000461115 DIEXFQ68CQ4 756 aaKnown RBP15.74■□□□□ 0.11
IFT88-204ENST00000461115 TSPY4P0CV99 314 aa15.73■□□□□ 0.11
IFT88-204ENST00000461115 TSPY10P0CW01 314 aa15.73■□□□□ 0.11
IFT88-204ENST00000461115 ARHGEF12Q9NZN5 1544 aa15.72■□□□□ 0.11
IFT88-204ENST00000461115 HNRNPMP52272 730 aaKnown RBP eCLIP15.71■□□□□ 0.11
IFT88-204ENST00000461115 EFCAB2Q5VUJ9 269 aa15.7■□□□□ 0.1
IFT88-204ENST00000461115 RPRD2Q5VT52 1461 aaKnown RBP15.7■□□□□ 0.1
IFT88-204ENST00000461115 ASXL2Q76L83 1435 aa15.7■□□□□ 0.1
IFT88-204ENST00000461115 KIF15Q9NS87 1388 aa15.7■□□□□ 0.1
IFT88-204ENST00000461115 UNC13BO14795 1591 aa15.69■□□□□ 0.1
IFT88-204ENST00000461115 TRIM52Q96A61 297 aa15.68■□□□□ 0.1
IFT88-204ENST00000461115 RTEL1-TNFRSF6BF6WH68 1400 aa15.68■□□□□ 0.1
IFT88-204ENST00000461115 TONSLQ96HA7 1378 aa15.68■□□□□ 0.1
IFT88-204ENST00000461115 NEUROD1Q13562 356 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms