RNA–Protein interactions for RNA: ENST00000460767.5

SCAMP4-206, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 4

Gene SCAMP4, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-206ENST00000460767 PLCH2O75038 1416 aa22.79■■□□□ 1.24
SCAMP4-206ENST00000460767 C9orf84Q5VXU9 1444 aa22.77■■□□□ 1.24
SCAMP4-206ENST00000460767 ATP10AO60312 1499 aa22.76■■□□□ 1.23
SCAMP4-206ENST00000460767 SCAPERQ9BY12 1400 aa22.75■■□□□ 1.23
SCAMP4-206ENST00000460767 MYO5CQ9NQX4 1742 aa22.74■■□□□ 1.23
SCAMP4-206ENST00000460767 CDK13Q14004 1512 aaKnown RBP22.73■■□□□ 1.23
SCAMP4-206ENST00000460767 KDM5CP41229 1560 aa22.72■■□□□ 1.23
SCAMP4-206ENST00000460767 REREQ9P2R6 1566 aa22.71■■□□□ 1.23
SCAMP4-206ENST00000460767 STRCQ7RTU9 1775 aa22.7■■□□□ 1.22
SCAMP4-206ENST00000460767 ZNF518AQ6AHZ1 1483 aa22.68■■□□□ 1.22
SCAMP4-206ENST00000460767 SETD1BQ9UPS6 1966 aaKnown RBP22.64■■□□□ 1.21
SCAMP4-206ENST00000460767 MLECQ14165 292 aa22.64■■□□□ 1.21
SCAMP4-206ENST00000460767 DMRT2Q9Y5R5 561 aa22.64■■□□□ 1.21
SCAMP4-206ENST00000460767 UHRF1BP1Q6BDS2 1440 aa22.64■■□□□ 1.21
SCAMP4-206ENST00000460767 KIF14Q15058 1648 aa22.63■■□□□ 1.21
SCAMP4-206ENST00000460767 FMN1Q68DA7 1419 aa22.62■■□□□ 1.21
SCAMP4-206ENST00000460767 DIP2CQ9Y2E4 1556 aa22.62■■□□□ 1.21
SCAMP4-206ENST00000460767 EFCAB2Q5VUJ9 269 aa22.61■■□□□ 1.21
SCAMP4-206ENST00000460767 PLPPR3Q6T4P5 718 aa22.61■■□□□ 1.21
SCAMP4-206ENST00000460767 PTPRTO14522 1441 aa22.6■■□□□ 1.21
SCAMP4-206ENST00000460767 AGLP35573 1532 aa22.59■■□□□ 1.21
SCAMP4-206ENST00000460767 RANGAP1P46060 587 aaPredicted RBP22.58■■□□□ 1.21
SCAMP4-206ENST00000460767 IQSEC2Q5JU85 1478 aa22.58■■□□□ 1.2
SCAMP4-206ENST00000460767 MLH3Q9UHC1 1453 aa22.57■■□□□ 1.2
SCAMP4-206ENST00000460767 C3P01024 1663 aa22.57■■□□□ 1.2
SCAMP4-206ENST00000460767 TROQ12816 1431 aaPredicted RBP22.57■■□□□ 1.2
SCAMP4-206ENST00000460767 ABCA6Q8N139 1617 aa22.56■■□□□ 1.2
SCAMP4-206ENST00000460767 ARHGAP5Q13017 1502 aa22.55■■□□□ 1.2
SCAMP4-206ENST00000460767 CDK11AQ9UQ88 783 aaPredicted RBP22.54■■□□□ 1.2
SCAMP4-206ENST00000460767 DISP3Q9P2K9 1392 aa22.53■■□□□ 1.2
SCAMP4-206ENST00000460767 CEBPAP49715 358 aaPredicted RBP22.53■■□□□ 1.2
SCAMP4-206ENST00000460767 SPATA31D1Q6ZQQ2 1576 aa22.52■■□□□ 1.2
SCAMP4-206ENST00000460767 SOCS7O14512 581 aa22.52■■□□□ 1.2
SCAMP4-206ENST00000460767 LTBP4Q8N2S1 1624 aa22.52■■□□□ 1.2
SCAMP4-206ENST00000460767 ARHGAP35Q9NRY4 1499 aa22.52■■□□□ 1.2
SCAMP4-206ENST00000460767 CDC42BPBQ9Y5S2 1711 aa22.51■■□□□ 1.19
SCAMP4-206ENST00000460767 CLIP1P30622 1438 aa22.51■■□□□ 1.19
SCAMP4-206ENST00000460767 PREX2Q70Z35 1606 aa22.51■■□□□ 1.19
SCAMP4-206ENST00000460767 ABCC1P33527 1531 aa22.5■■□□□ 1.19
SCAMP4-206ENST00000460767 LRRIQ1Q96JM4 1722 aa22.49■■□□□ 1.19
SCAMP4-206ENST00000460767 ILDR2Q71H61 639 aa22.49■■□□□ 1.19
SCAMP4-206ENST00000460767 ITSN2Q9NZM3 1697 aa22.48■■□□□ 1.19
SCAMP4-206ENST00000460767 CNTLNQ9NXG0 1405 aa22.48■■□□□ 1.19
SCAMP4-206ENST00000460767 TRAPPC8Q9Y2L5 1435 aa22.48■■□□□ 1.19
SCAMP4-206ENST00000460767 AFAP1Q8N556 730 aa22.47■■□□□ 1.19
SCAMP4-206ENST00000460767 MROH2AA6NES4 1674 aa22.46■■□□□ 1.19
SCAMP4-206ENST00000460767 NCOA1Q15788 1441 aa22.46■■□□□ 1.19
SCAMP4-206ENST00000460767 KIDINS220Q9ULH0 1771 aa22.44■■□□□ 1.18
SCAMP4-206ENST00000460767 NPATQ14207 1427 aa22.42■■□□□ 1.18
SCAMP4-206ENST00000460767 CCDC18Q5T9S5 1454 aa22.39■■□□□ 1.17
SCAMP4-206ENST00000460767 CDC42BPAQ5VT25 1732 aa22.37■■□□□ 1.17
SCAMP4-206ENST00000460767 ZNF142P52746 1687 aaPredicted RBP22.36■■□□□ 1.17
SCAMP4-206ENST00000460767 CAMSAP1Q5T5Y3 1602 aa22.35■■□□□ 1.17
SCAMP4-206ENST00000460767 SAMD9LQ8IVG5 1584 aa22.33■■□□□ 1.17
SCAMP4-206ENST00000460767 ESF1Q9H501 851 aaKnown RBP22.33■■□□□ 1.17
SCAMP4-206ENST00000460767 ATP1B4Q9UN42 357 aaPredicted RBP22.33■■□□□ 1.17
SCAMP4-206ENST00000460767 PLA2R1Q13018 1463 aa22.33■■□□□ 1.16
SCAMP4-206ENST00000460767 UBTFP17480 764 aaKnown RBP22.32■■□□□ 1.16
SCAMP4-206ENST00000460767 MYT1LQ9UL68 1186 aa22.32■■□□□ 1.16
SCAMP4-206ENST00000460767 CASKIN1Q8WXD9 1431 aa22.31■■□□□ 1.16
SCAMP4-206ENST00000460767 PLXNC1O60486 1568 aa22.31■■□□□ 1.16
SCAMP4-206ENST00000460767 MYO3AQ8NEV4 1616 aa22.29■■□□□ 1.16
SCAMP4-206ENST00000460767 TCOF1Q13428 1488 aaKnown RBP22.27■■□□□ 1.16
SCAMP4-206ENST00000460767 INO80Q9ULG1 1556 aaPredicted RBP22.26■■□□□ 1.15
SCAMP4-206ENST00000460767 ZMYM3Q14202 1370 aa22.25■■□□□ 1.15
SCAMP4-206ENST00000460767 SYCP2Q9BX26 1530 aa22.25■■□□□ 1.15
SCAMP4-206ENST00000460767 CEP170BQ9Y4F5 1589 aaPredicted RBP22.25■■□□□ 1.15
SCAMP4-206ENST00000460767 ATP7AQ04656 1500 aa22.24■■□□□ 1.15
SCAMP4-206ENST00000460767 FYCO1Q9BQS8 1478 aa22.23■■□□□ 1.15
SCAMP4-206ENST00000460767 CLTCQ00610 1675 aaKnown RBP22.23■■□□□ 1.15
SCAMP4-206ENST00000460767 KIAA1107Q9UPP5 1409 aa22.23■■□□□ 1.15
SCAMP4-206ENST00000460767 EHMT2Q96KQ7 1210 aa22.22■■□□□ 1.15
SCAMP4-206ENST00000460767 SUPT6HQ7KZ85 1726 aaKnown RBP22.22■■□□□ 1.15
SCAMP4-206ENST00000460767 PLEKHH2Q8IVE3 1493 aa22.21■■□□□ 1.15
SCAMP4-206ENST00000460767 PKD2Q13563 968 aa22.2■■□□□ 1.14
SCAMP4-206ENST00000460767 PTPRKQ15262 1439 aa22.2■■□□□ 1.14
SCAMP4-206ENST00000460767 GPATCH8Q9UKJ3 1502 aaKnown RBP22.2■■□□□ 1.14
SCAMP4-206ENST00000460767 A2MP01023 1474 aa22.18■■□□□ 1.14
SCAMP4-206ENST00000460767 ZNF335Q9H4Z2 1342 aaPredicted RBP22.17■■□□□ 1.14
SCAMP4-206ENST00000460767 ADGBQ8N7X0 1667 aa22.17■■□□□ 1.14
SCAMP4-206ENST00000460767 SPAG9O60271 1321 aaKnown RBP22.16■■□□□ 1.14
SCAMP4-206ENST00000460767 PPP6R1Q9UPN7 881 aa22.14■■□□□ 1.13
SCAMP4-206ENST00000460767 NCKAP5LQ9HCH0 1330 aa22.13■■□□□ 1.13
SCAMP4-206ENST00000460767 FAM135AQ9P2D6 1515 aa22.11■■□□□ 1.13
SCAMP4-206ENST00000460767 A2ML1A8K2U0 1454 aa22.11■■□□□ 1.13
SCAMP4-206ENST00000460767 UBAP1LF5GYI3 381 aa22.11■■□□□ 1.13
SCAMP4-206ENST00000460767 DNMT1P26358 1616 aaKnown RBP22.1■■□□□ 1.13
SCAMP4-206ENST00000460767 POLR1AO95602 1720 aaPredicted RBP22.1■■□□□ 1.13
SCAMP4-206ENST00000460767 CPS1P31327 1500 aa22.09■■□□□ 1.13
SCAMP4-206ENST00000460767 NEURL4Q96JN8 1562 aa22.07■■□□□ 1.12
SCAMP4-206ENST00000460767 MED1Q15648 1581 aaPredicted RBP22.05■■□□□ 1.12
SCAMP4-206ENST00000460767 HNRNPMP52272 730 aaKnown RBP eCLIP22.05■■□□□ 1.122e-12■■□□□ 14.5
SCAMP4-206ENST00000460767 ZNF777Q9ULD5 760 aaPredicted RBP22.05■■□□□ 1.12
SCAMP4-206ENST00000460767 RTEL1-TNFRSF6BF6WH68 1400 aa22.05■■□□□ 1.12
SCAMP4-206ENST00000460767 CEP162Q5TB80 1403 aa22.04■■□□□ 1.12
SCAMP4-206ENST00000460767 CCNB3Q8WWL7 1395 aa22.02■■□□□ 1.12
SCAMP4-206ENST00000460767 CFDP1Q9UEE9 299 aaPredicted RBP22.02■■□□□ 1.12
SCAMP4-206ENST00000460767 MBD5Q9P267 1494 aa22.02■■□□□ 1.12
SCAMP4-206ENST00000460767 TIAM1Q13009 1591 aa22■■□□□ 1.11
SCAMP4-206ENST00000460767 LOC105371045A0A1W2PR82 267 aa22■■□□□ 1.11
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