RNA–Protein interactions for RNA: ENST00000460616.5

SSR4-206, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2

Gene SSR4, Length 2,482 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-206ENST00000460616 UACAQ9BZF9 1416 aa21.47■■□□□ 1.03
SSR4-206ENST00000460616 ERICH6BQ5W0A0 696 aa21.45■■□□□ 1.02
SSR4-206ENST00000460616 ADCY10Q96PN6 1610 aa21.45■■□□□ 1.02
SSR4-206ENST00000460616 MAP3K1Q13233 1512 aa21.44■■□□□ 1.02
SSR4-206ENST00000460616 ABCC2Q92887 1545 aa21.44■■□□□ 1.02
SSR4-206ENST00000460616 PHLDB1Q86UU1 1377 aa21.44■■□□□ 1.02
SSR4-206ENST00000460616 DEKP35659 375 aaKnown RBP21.43■■□□□ 1.02
SSR4-206ENST00000460616 MAGI3Q5TCQ9 1506 aa21.41■■□□□ 1.02
SSR4-206ENST00000460616 PPP4R2Q9NY27 417 aa21.41■■□□□ 1.02
SSR4-206ENST00000460616 LRRC9Q6ZRR7 1453 aa21.41■■□□□ 1.02
SSR4-206ENST00000460616 CCDC18Q5T9S5 1454 aa21.39■■□□□ 1.02
SSR4-206ENST00000460616 ATP10BO94823 1461 aa21.38■■□□□ 1.01
SSR4-206ENST00000460616 CYB5RLQ6IPT4 315 aa21.37■■□□□ 1.01
SSR4-206ENST00000460616 TONSLQ96HA7 1378 aa21.37■■□□□ 1.01
SSR4-206ENST00000460616 ZCCHC11Q5TAX3 1644 aaKnown RBP21.36■■□□□ 1.01
SSR4-206ENST00000460616 UHRF1BP1LA0JNW5 1464 aa21.36■■□□□ 1.01
SSR4-206ENST00000460616 KDM5BQ9UGL1 1544 aa21.31■■□□□ 1
SSR4-206ENST00000460616 MTUS2Q5JR59 1369 aa21.3■■□□□ 1
SSR4-206ENST00000460616 EHBP1L1Q8N3D4 1523 aa21.28■■□□□ 1
SSR4-206ENST00000460616 PRKCSHP14314 528 aaPredicted RBP21.27■□□□□ 0.99
SSR4-206ENST00000460616 B4GALNT3Q6L9W6 998 aa21.26■□□□□ 0.99
SSR4-206ENST00000460616 NOP58Q9Y2X3 529 aaKnown RBP21.26■□□□□ 0.99
SSR4-206ENST00000460616 KIF14Q15058 1648 aa21.25■□□□□ 0.99
SSR4-206ENST00000460616 SUPT6HQ7KZ85 1726 aaKnown RBP21.23■□□□□ 0.99
SSR4-206ENST00000460616 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.21■□□□□ 0.996e-8■■□□□ 11.8
SSR4-206ENST00000460616 NBR1Q14596 966 aa21.21■□□□□ 0.99
SSR4-206ENST00000460616 TROQ12816 1431 aaPredicted RBP21.21■□□□□ 0.99
SSR4-206ENST00000460616 DNAJC5Q9H3Z4 198 aa21.2■□□□□ 0.98
SSR4-206ENST00000460616 NCOA2Q15596 1464 aa21.2■□□□□ 0.98
SSR4-206ENST00000460616 PLEKHD1A6NEE1 506 aa21.19■□□□□ 0.98
SSR4-206ENST00000460616 WASHC2AQ641Q2 1341 aa21.18■□□□□ 0.98
SSR4-206ENST00000460616 PAK3O75914 559 aaPredicted RBP21.17■□□□□ 0.98
SSR4-206ENST00000460616 CCDC184Q52MB2 194 aa21.16■□□□□ 0.98
SSR4-206ENST00000460616 ASXL2Q76L83 1435 aa21.15■□□□□ 0.98
SSR4-206ENST00000460616 HSPA5P11021 654 aaKnown RBP21.14■□□□□ 0.97
SSR4-206ENST00000460616 NPM1P06748 294 aaKnown RBP eCLIP21.13■□□□□ 0.97
SSR4-206ENST00000460616 FAM9BQ8IZU0 186 aa21.13■□□□□ 0.97
SSR4-206ENST00000460616 WDR7Q9Y4E6 1490 aa21.13■□□□□ 0.97
SSR4-206ENST00000460616 TTC37Q6PGP7 1564 aa21.12■□□□□ 0.97
SSR4-206ENST00000460616 ZBED9Q6R2W3 1325 aa21.11■□□□□ 0.97
SSR4-206ENST00000460616 ABCC10Q5T3U5 1492 aa21.09■□□□□ 0.97
SSR4-206ENST00000460616 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.09■□□□□ 0.974e-9■□□□□ 10.3
SSR4-206ENST00000460616 CDC42BPAQ5VT25 1732 aa21.09■□□□□ 0.97
SSR4-206ENST00000460616 HFM1A2PYH4 1435 aa21.07■□□□□ 0.96
SSR4-206ENST00000460616 EIF4G2P78344 907 aaKnown RBP eCLIP21.07■□□□□ 0.96
SSR4-206ENST00000460616 PRKRIP1Q9H875 184 aaPredicted RBP21.07■□□□□ 0.96
SSR4-206ENST00000460616 MRS2Q9HD23 443 aa21.07■□□□□ 0.96
SSR4-206ENST00000460616 MYOM3Q5VTT5 1437 aa21.06■□□□□ 0.96
SSR4-206ENST00000460616 FGD6Q6ZV73 1430 aa21.06■□□□□ 0.96
SSR4-206ENST00000460616 CNTLNQ9NXG0 1405 aa21.06■□□□□ 0.96
SSR4-206ENST00000460616 IPO9Q96P70 1041 aaKnown RBP21.05■□□□□ 0.96
SSR4-206ENST00000460616 ANP32AP39687 249 aaKnown RBP21.05■□□□□ 0.96
SSR4-206ENST00000460616 RTL5Q5HYW3 569 aaPredicted RBP21.04■□□□□ 0.96
SSR4-206ENST00000460616 ANO8Q9HCE9 1232 aaPredicted RBP21.03■□□□□ 0.96
SSR4-206ENST00000460616 GPATCH8Q9UKJ3 1502 aaKnown RBP21.03■□□□□ 0.96
SSR4-206ENST00000460616 PTPRKQ15262 1439 aa21.02■□□□□ 0.96
SSR4-206ENST00000460616 CDC42BPBQ9Y5S2 1711 aa21.02■□□□□ 0.96
SSR4-206ENST00000460616 ITSN2Q9NZM3 1697 aa21.02■□□□□ 0.96
SSR4-206ENST00000460616 ZBTB47Q9UFB7 747 aaPredicted RBP21.01■□□□□ 0.95
SSR4-206ENST00000460616 MYO5CQ9NQX4 1742 aa21.01■□□□□ 0.95
SSR4-206ENST00000460616 PREX2Q70Z35 1606 aa21■□□□□ 0.95
SSR4-206ENST00000460616 PTPN23Q9H3S7 1636 aa21■□□□□ 0.95
SSR4-206ENST00000460616 ABCA9Q8IUA7 1624 aa20.99■□□□□ 0.95
SSR4-206ENST00000460616 NAIPQ13075 1403 aa20.99■□□□□ 0.95
SSR4-206ENST00000460616 C11orf95C9JLR9 678 aaPredicted RBP20.97■□□□□ 0.95
SSR4-206ENST00000460616 CCDC136Q96JN2 1154 aa20.97■□□□□ 0.95
SSR4-206ENST00000460616 ZNF644Q9H582 1327 aaPredicted RBP20.96■□□□□ 0.95
SSR4-206ENST00000460616 DIP2BQ9P265 1576 aa20.96■□□□□ 0.95
SSR4-206ENST00000460616 CCDC7Q96M83 1385 aa20.94■□□□□ 0.94
SSR4-206ENST00000460616 KIF13AQ9H1H9 1805 aa20.93■□□□□ 0.94
SSR4-206ENST00000460616 CFDP1Q9UEE9 299 aaPredicted RBP20.93■□□□□ 0.94
SSR4-206ENST00000460616 ZNF777Q9ULD5 760 aaPredicted RBP20.93■□□□□ 0.94
SSR4-206ENST00000460616 ARHGAP5Q13017 1502 aa20.92■□□□□ 0.94
SSR4-206ENST00000460616 NCOA1Q15788 1441 aa20.91■□□□□ 0.94
SSR4-206ENST00000460616 SMG6Q86US8 1419 aaKnown RBP20.91■□□□□ 0.94
SSR4-206ENST00000460616 MIA2Q96PC5 1412 aa20.91■□□□□ 0.94
SSR4-206ENST00000460616 CAMSAP2Q08AD1 1489 aa20.91■□□□□ 0.94
SSR4-206ENST00000460616 SAMD9LQ8IVG5 1584 aa20.91■□□□□ 0.94
SSR4-206ENST00000460616 SALL2Q9Y467 1007 aaPredicted RBP20.9■□□□□ 0.94
SSR4-206ENST00000460616 AKNAQ7Z591 1439 aa20.9■□□□□ 0.94
SSR4-206ENST00000460616 TCOF1Q13428 1488 aaKnown RBP20.9■□□□□ 0.94
SSR4-206ENST00000460616 PLCH2O75038 1416 aa20.89■□□□□ 0.93
SSR4-206ENST00000460616 TSPOAP1O95153 1857 aa20.89■□□□□ 0.93
SSR4-206ENST00000460616 MAP3K4Q9Y6R4 1608 aa20.88■□□□□ 0.93
SSR4-206ENST00000460616 RNF123Q5XPI4 1314 aa20.87■□□□□ 0.93
SSR4-206ENST00000460616 FAM69CQ0P6D2 419 aa20.87■□□□□ 0.93
SSR4-206ENST00000460616 NUDCQ9Y266 331 aa20.87■□□□□ 0.93
SSR4-206ENST00000460616 L3MBTL2Q969R5 705 aa20.87■□□□□ 0.93
SSR4-206ENST00000460616 GLI2P10070 1586 aa20.86■□□□□ 0.93
SSR4-206ENST00000460616 IL27Q8NEV9 243 aa20.86■□□□□ 0.93
SSR4-206ENST00000460616 CD109Q6YHK3 1445 aa20.86■□□□□ 0.93
SSR4-206ENST00000460616 RRP7BPQ9NSQ0 103 aa20.85■□□□□ 0.93
SSR4-206ENST00000460616 FANCAO15360 1455 aa20.82■□□□□ 0.92
SSR4-206ENST00000460616 SYCP2Q9BX26 1530 aa20.82■□□□□ 0.92
SSR4-206ENST00000460616 PPRC1Q5VV67 1664 aaKnown RBP20.82■□□□□ 0.92
SSR4-206ENST00000460616 ARAP3Q8WWN8 1544 aa20.81■□□□□ 0.92
SSR4-206ENST00000460616 KIF7Q2M1P5 1343 aa20.81■□□□□ 0.92
SSR4-206ENST00000460616 DNMT1P26358 1616 aaKnown RBP20.8■□□□□ 0.92
SSR4-206ENST00000460616 DENND4BO75064 1496 aaPredicted RBP20.8■□□□□ 0.92
SSR4-206ENST00000460616 ARHGEF12Q9NZN5 1544 aa20.8■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms