RNA–Protein interactions for RNA: ENST00000460119.1

PDE6B-203, Transcript of phosphodiesterase 6B, humanhuman

TSL 4

Gene PDE6B, Length 541 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6B-203ENST00000460119 ZFYVE16Q7Z3T8 1539 aa35.81■■■■□ 3.32
PDE6B-203ENST00000460119 CFAP74Q9C0B2 1584 aa35.81■■■■□ 3.32
PDE6B-203ENST00000460119 POGZQ7Z3K3 1410 aa35.8■■■■□ 3.32
PDE6B-203ENST00000460119 ZMYM4Q5VZL5 1548 aa35.79■■■■□ 3.32
PDE6B-203ENST00000460119 PCF11O94913 1555 aaKnown RBP35.78■■■■□ 3.32
PDE6B-203ENST00000460119 HECW1Q76N89 1606 aa35.78■■■■□ 3.32
PDE6B-203ENST00000460119 RIMS1Q86UR5 1692 aaKnown RBP35.78■■■■□ 3.32
PDE6B-203ENST00000460119 MAGI2Q86UL8 1455 aa35.77■■■■□ 3.32
PDE6B-203ENST00000460119 SIGLEC1Q9BZZ2 1709 aa35.74■■■■□ 3.31
PDE6B-203ENST00000460119 AFAP1Q8N556 730 aa35.74■■■■□ 3.31
PDE6B-203ENST00000460119 TROQ12816 1431 aaPredicted RBP35.68■■■■□ 3.3
PDE6B-203ENST00000460119 ATP10AO60312 1499 aa35.67■■■■□ 3.3
PDE6B-203ENST00000460119 CEBPAP49715 358 aaPredicted RBP35.67■■■■□ 3.3
PDE6B-203ENST00000460119 MYT1LQ9UL68 1186 aa35.67■■■■□ 3.3
PDE6B-203ENST00000460119 KIF14Q15058 1648 aa35.65■■■■□ 3.3
PDE6B-203ENST00000460119 C9orf84Q5VXU9 1444 aa35.58■■■■□ 3.29
PDE6B-203ENST00000460119 ARHGAP5Q13017 1502 aa35.58■■■■□ 3.29
PDE6B-203ENST00000460119 CLIP1P30622 1438 aa35.57■■■■□ 3.29
PDE6B-203ENST00000460119 MYO5CQ9NQX4 1742 aa35.52■■■■□ 3.28
PDE6B-203ENST00000460119 ARHGEF12Q9NZN5 1544 aa35.52■■■■□ 3.28
PDE6B-203ENST00000460119 ZNF518AQ6AHZ1 1483 aa35.51■■■■□ 3.28
PDE6B-203ENST00000460119 CASKIN1Q8WXD9 1431 aa35.47■■■■□ 3.27
PDE6B-203ENST00000460119 TRAPPC8Q9Y2L5 1435 aa35.47■■■■□ 3.27
PDE6B-203ENST00000460119 LRRIQ1Q96JM4 1722 aa35.45■■■■□ 3.27
PDE6B-203ENST00000460119 FER1L4A9Z1Z3 1794 aa35.43■■■■□ 3.26
PDE6B-203ENST00000460119 CERKQ8TCT0 537 aa35.42■■■■□ 3.26
PDE6B-203ENST00000460119 ZNF777Q9ULD5 760 aaPredicted RBP35.41■■■■□ 3.26
PDE6B-203ENST00000460119 KDM5CP41229 1560 aa35.4■■■■□ 3.26
PDE6B-203ENST00000460119 MLH3Q9UHC1 1453 aa35.35■■■■□ 3.25
PDE6B-203ENST00000460119 DIP2CQ9Y2E4 1556 aa35.35■■■■□ 3.25
PDE6B-203ENST00000460119 CCDC18Q5T9S5 1454 aa35.34■■■■□ 3.25
PDE6B-203ENST00000460119 CDC42BPBQ9Y5S2 1711 aa35.33■■■■□ 3.25
PDE6B-203ENST00000460119 HNRNPMP52272 730 aaKnown RBP eCLIP35.3■■■■□ 3.24
PDE6B-203ENST00000460119 ESF1Q9H501 851 aaKnown RBP35.3■■■■□ 3.24
PDE6B-203ENST00000460119 ABCC1P33527 1531 aa35.27■■■■□ 3.24
PDE6B-203ENST00000460119 ABCA6Q8N139 1617 aa35.26■■■■□ 3.24
PDE6B-203ENST00000460119 PREX2Q70Z35 1606 aa35.24■■■■□ 3.23
PDE6B-203ENST00000460119 UHRF1BP1Q6BDS2 1440 aa35.24■■■■□ 3.23
PDE6B-203ENST00000460119 DMRT2Q9Y5R5 561 aa35.21■■■■□ 3.23
PDE6B-203ENST00000460119 FYCO1Q9BQS8 1478 aa35.21■■■■□ 3.23
PDE6B-203ENST00000460119 GPATCH8Q9UKJ3 1502 aaKnown RBP35.21■■■■□ 3.23
PDE6B-203ENST00000460119 REREQ9P2R6 1566 aa35.21■■■■□ 3.23
PDE6B-203ENST00000460119 SPAG9O60271 1321 aaKnown RBP35.19■■■■□ 3.22
PDE6B-203ENST00000460119 AGLP35573 1532 aa35.19■■■■□ 3.22
PDE6B-203ENST00000460119 PREX1Q8TCU6 1659 aa35.18■■■■□ 3.22
PDE6B-203ENST00000460119 CFDP1Q9UEE9 299 aaPredicted RBP35.17■■■■□ 3.22
PDE6B-203ENST00000460119 ITSN2Q9NZM3 1697 aa35.15■■■■□ 3.22
PDE6B-203ENST00000460119 KIDINS220Q9ULH0 1771 aa35.13■■■■□ 3.21
PDE6B-203ENST00000460119 CDC42BPAQ5VT25 1732 aa35.12■■■■□ 3.21
PDE6B-203ENST00000460119 SAMD9LQ8IVG5 1584 aa35.11■■■■□ 3.21
PDE6B-203ENST00000460119 CCNB3Q8WWL7 1395 aa35.09■■■■□ 3.21
PDE6B-203ENST00000460119 STRCQ7RTU9 1775 aa35.08■■■■□ 3.21
PDE6B-203ENST00000460119 SYCP2Q9BX26 1530 aa35.08■■■■□ 3.21
PDE6B-203ENST00000460119 ZNF644Q9H582 1327 aaPredicted RBP35.07■■■■□ 3.21
PDE6B-203ENST00000460119 C3P01024 1663 aa35.07■■■■□ 3.2
PDE6B-203ENST00000460119 ZMYM3Q14202 1370 aa35.05■■■■□ 3.2
PDE6B-203ENST00000460119 MTUS2Q5JR59 1369 aa35.04■■■■□ 3.2
PDE6B-203ENST00000460119 SETD1BQ9UPS6 1966 aaKnown RBP35.04■■■■□ 3.2
PDE6B-203ENST00000460119 CNTLNQ9NXG0 1405 aa35.04■■■■□ 3.2
PDE6B-203ENST00000460119 GGT6Q6P531 493 aa35.02■■■■□ 3.2
PDE6B-203ENST00000460119 KIAA1107Q9UPP5 1409 aa35.02■■■■□ 3.2
PDE6B-203ENST00000460119 PTPRTO14522 1441 aa35■■■■□ 3.19
PDE6B-203ENST00000460119 NCKAP5LQ9HCH0 1330 aa34.95■■■■□ 3.19
PDE6B-203ENST00000460119 A2MP01023 1474 aa34.94■■■■□ 3.18
PDE6B-203ENST00000460119 PLEKHH2Q8IVE3 1493 aa34.94■■■■□ 3.18
PDE6B-203ENST00000460119 ATP7AQ04656 1500 aa34.93■■■■□ 3.18
PDE6B-203ENST00000460119 NCOA1Q15788 1441 aa34.91■■■■□ 3.18
PDE6B-203ENST00000460119 NPATQ14207 1427 aa34.89■■■■□ 3.18
PDE6B-203ENST00000460119 SUPT6HQ7KZ85 1726 aaKnown RBP34.89■■■■□ 3.18
PDE6B-203ENST00000460119 MBD5Q9P267 1494 aa34.84■■■■□ 3.17
PDE6B-203ENST00000460119 CAMSAP1Q5T5Y3 1602 aa34.82■■■■□ 3.16
PDE6B-203ENST00000460119 INO80Q9ULG1 1556 aaPredicted RBP34.82■■■■□ 3.16
PDE6B-203ENST00000460119 PTPRKQ15262 1439 aa34.81■■■■□ 3.16
PDE6B-203ENST00000460119 LTBP4Q8N2S1 1624 aa34.81■■■■□ 3.16
PDE6B-203ENST00000460119 PLXNC1O60486 1568 aa34.8■■■■□ 3.16
PDE6B-203ENST00000460119 TIAM1Q13009 1591 aa34.79■■■■□ 3.16
PDE6B-203ENST00000460119 CEP162Q5TB80 1403 aa34.78■■■■□ 3.16
PDE6B-203ENST00000460119 ZNF335Q9H4Z2 1342 aaPredicted RBP34.78■■■■□ 3.16
PDE6B-203ENST00000460119 PPP6R1Q9UPN7 881 aa34.77■■■■□ 3.16
PDE6B-203ENST00000460119 CLTCQ00610 1675 aaKnown RBP34.76■■■■□ 3.15
PDE6B-203ENST00000460119 DISP3Q9P2K9 1392 aa34.75■■■■□ 3.15
PDE6B-203ENST00000460119 MROH2AA6NES4 1674 aa34.75■■■■□ 3.15
PDE6B-203ENST00000460119 DHX29Q7Z478 1369 aaKnown RBP34.74■■■■□ 3.15
PDE6B-203ENST00000460119 KIF3BO15066 747 aa34.74■■■■□ 3.15
PDE6B-203ENST00000460119 FBXO31Q5XUX0 539 aaPredicted RBP34.74■■■■□ 3.15
PDE6B-203ENST00000460119 ILDR2Q71H61 639 aa34.73■■■■□ 3.15
PDE6B-203ENST00000460119 EHBP1L1Q8N3D4 1523 aa34.72■■■■□ 3.15
PDE6B-203ENST00000460119 PKD2Q13563 968 aa34.71■■■■□ 3.15
PDE6B-203ENST00000460119 RTEL1-TNFRSF6BF6WH68 1400 aa34.71■■■■□ 3.15
PDE6B-203ENST00000460119 LOC105371045A0A1W2PR82 267 aa34.68■■■■□ 3.14
PDE6B-203ENST00000460119 NCOA2Q15596 1464 aa34.65■■■■□ 3.14
PDE6B-203ENST00000460119 UBAP1LF5GYI3 381 aa34.61■■■■□ 3.13
PDE6B-203ENST00000460119 RSPH4AQ5TD94 716 aa34.61■■■■□ 3.13
PDE6B-203ENST00000460119 CEP170BQ9Y4F5 1589 aaPredicted RBP34.61■■■■□ 3.13
PDE6B-203ENST00000460119 PLA2R1Q13018 1463 aa34.6■■■■□ 3.13
PDE6B-203ENST00000460119 MYO3AQ8NEV4 1616 aa34.6■■■■□ 3.13
PDE6B-203ENST00000460119 ADGBQ8N7X0 1667 aa34.6■■■■□ 3.13
PDE6B-203ENST00000460119 TCOF1Q13428 1488 aaKnown RBP34.59■■■■□ 3.13
PDE6B-203ENST00000460119 WASHC2CQ9Y4E1 1318 aa34.59■■■■□ 3.13
PDE6B-203ENST00000460119 CAMSAP2Q08AD1 1489 aa34.58■■■■□ 3.13
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms