RNA–Protein interactions for RNA: ENST00000460112.3

SHROOM4-203, Transcript of shroom family member 4, humanhuman

TSL 5 BASIC

Gene SHROOM4, Length 8,919 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4-203ENST00000460112 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.23□□□□□ -0.61
SHROOM4-203ENST00000460112 WRNQ14191 1432 aaPredicted RBP eCLIP11.23□□□□□ -0.61
SHROOM4-203ENST00000460112 RTF1Q92541 710 aaKnown RBP11.22□□□□□ -0.61
SHROOM4-203ENST00000460112 IPO8O15397 1037 aaKnown RBP11.22□□□□□ -0.61
SHROOM4-203ENST00000460112 CSPP1Q1MSJ5 1256 aa11.22□□□□□ -0.61
SHROOM4-203ENST00000460112 EIF3AQ14152 1382 aaKnown RBP11.22□□□□□ -0.61
SHROOM4-203ENST00000460112 GBP4Q96PP9 640 aa11.21□□□□□ -0.61
SHROOM4-203ENST00000460112 TMF1P82094 1093 aa11.21□□□□□ -0.62
SHROOM4-203ENST00000460112 PRM3Q9NNZ6 103 aa11.21□□□□□ -0.62
SHROOM4-203ENST00000460112 BAZ1BQ9UIG0 1483 aaKnown RBP11.2□□□□□ -0.62
SHROOM4-203ENST00000460112 IRX6P78412 446 aaPredicted RBP11.2□□□□□ -0.62
SHROOM4-203ENST00000460112 NCBP3Q53F19 620 aaKnown RBP11.2□□□□□ -0.62
SHROOM4-203ENST00000460112 FRAT1Q92837 279 aaPredicted RBP11.2□□□□□ -0.62
SHROOM4-203ENST00000460112 A0A0U1RQG5 324 aaPredicted RBP11.19□□□□□ -0.62
SHROOM4-203ENST00000460112 SMARCA2P51531 1590 aa11.19□□□□□ -0.62
SHROOM4-203ENST00000460112 RSPH6AQ9H0K4 717 aa11.19□□□□□ -0.62
SHROOM4-203ENST00000460112 CCNB3Q8WWL7 1395 aa11.19□□□□□ -0.62
SHROOM4-203ENST00000460112 CALRP27797 417 aaKnown RBP11.18□□□□□ -0.62
SHROOM4-203ENST00000460112 TAOK2Q9UL54 1235 aa11.18□□□□□ -0.62
SHROOM4-203ENST00000460112 ROCK2O75116 1388 aaKnown RBP11.18□□□□□ -0.62
SHROOM4-203ENST00000460112 RGL3Q3MIN7 710 aa11.18□□□□□ -0.62
SHROOM4-203ENST00000460112 U2SURPO15042 1029 aaKnown RBP11.17□□□□□ -0.62
SHROOM4-203ENST00000460112 HSP90AA2PQ14568 343 aaPredicted RBP11.17□□□□□ -0.62
SHROOM4-203ENST00000460112 RGS3P49796 1198 aa11.17□□□□□ -0.62
SHROOM4-203ENST00000460112 CHMP4CQ96CF2 233 aa11.17□□□□□ -0.62
SHROOM4-203ENST00000460112 CEP89Q96ST8 783 aa11.16□□□□□ -0.62
SHROOM4-203ENST00000460112 NEUROD2Q15784 382 aa11.16□□□□□ -0.62
SHROOM4-203ENST00000460112 PHF14O94880 888 aa11.15□□□□□ -0.62
SHROOM4-203ENST00000460112 MIER1Q8N108 512 aa11.15□□□□□ -0.62
SHROOM4-203ENST00000460112 HDGFL2Q7Z4V5 671 aaPredicted RBP11.15□□□□□ -0.62
SHROOM4-203ENST00000460112 KIF3AQ9Y496 699 aa11.14□□□□□ -0.63
SHROOM4-203ENST00000460112 SPAG9O60271 1321 aaKnown RBP11.14□□□□□ -0.63
SHROOM4-203ENST00000460112 VPS8Q8N3P4 1428 aa11.14□□□□□ -0.63
SHROOM4-203ENST00000460112 SETQ01105 290 aaPredicted RBP11.13□□□□□ -0.63
SHROOM4-203ENST00000460112 KTN1Q86UP2 1357 aaKnown RBP11.13□□□□□ -0.63
SHROOM4-203ENST00000460112 ANO8Q9HCE9 1232 aaPredicted RBP11.12□□□□□ -0.63
SHROOM4-203ENST00000460112 MORC1Q86VD1 984 aa11.12□□□□□ -0.63
SHROOM4-203ENST00000460112 NGEFQ8N5V2 710 aa11.12□□□□□ -0.63
SHROOM4-203ENST00000460112 ARHGAP35Q9NRY4 1499 aa11.12□□□□□ -0.63
SHROOM4-203ENST00000460112 SRPK2P78362 688 aaKnown RBP11.11□□□□□ -0.63
SHROOM4-203ENST00000460112 TPM3P06753 285 aa11.11□□□□□ -0.63
SHROOM4-203ENST00000460112 FMN1Q68DA7 1419 aa11.11□□□□□ -0.63
SHROOM4-203ENST00000460112 HMMRO75330 724 aa11.11□□□□□ -0.63
SHROOM4-203ENST00000460112 TCERG1O14776 1098 aaKnown RBP11.1□□□□□ -0.63
SHROOM4-203ENST00000460112 EIF4G1Q04637 1599 aaKnown RBP11.1□□□□□ -0.63
SHROOM4-203ENST00000460112 RASSF8Q8NHQ8 419 aa11.1□□□□□ -0.63
SHROOM4-203ENST00000460112 GORABQ5T7V8 394 aa11.1□□□□□ -0.63
SHROOM4-203ENST00000460112 SENP3Q9H4L4 574 aaPredicted RBP11.09□□□□□ -0.63
SHROOM4-203ENST00000460112 RWDD1Q9H446 243 aaPredicted RBP11.09□□□□□ -0.63
SHROOM4-203ENST00000460112 G3V3G9 751 aa11.09□□□□□ -0.63
SHROOM4-203ENST00000460112 DCAF8Q5TAQ9 597 aa11.09□□□□□ -0.63
SHROOM4-203ENST00000460112 TPM2P07951 284 aa11.09□□□□□ -0.63
SHROOM4-203ENST00000460112 CC2D1BQ5T0F9 858 aaKnown RBP11.08□□□□□ -0.64
SHROOM4-203ENST00000460112 KRI1Q8N9T8 703 aaKnown RBP11.08□□□□□ -0.64
SHROOM4-203ENST00000460112 CCDC70Q6NSX1 233 aa11.08□□□□□ -0.64
SHROOM4-203ENST00000460112 PDE3BQ13370 1112 aa11.08□□□□□ -0.64
SHROOM4-203ENST00000460112 STK31Q9BXU1 1019 aa11.08□□□□□ -0.64
SHROOM4-203ENST00000460112 SUPT16HQ9Y5B9 1047 aaKnown RBP11.08□□□□□ -0.64
SHROOM4-203ENST00000460112 HSP90B1P14625 803 aaKnown RBP11.08□□□□□ -0.64
SHROOM4-203ENST00000460112 VSIG10Q8N0Z9 540 aa11.07□□□□□ -0.64
SHROOM4-203ENST00000460112 LMOD3Q0VAK6 560 aa11.07□□□□□ -0.64
SHROOM4-203ENST00000460112 SETD5Q9C0A6 1442 aa11.06□□□□□ -0.64
SHROOM4-203ENST00000460112 RALBP1Q15311 655 aa11.06□□□□□ -0.64
SHROOM4-203ENST00000460112 TAF7LQ5H9L4 462 aa11.06□□□□□ -0.64
SHROOM4-203ENST00000460112 TSR1Q2NL82 804 aaKnown RBP11.06□□□□□ -0.64
SHROOM4-203ENST00000460112 PMFBP1Q8TBY8 1022 aa11.06□□□□□ -0.64
SHROOM4-203ENST00000460112 CSB-PGBD3P0DP91 1061 aa11.05□□□□□ -0.64
SHROOM4-203ENST00000460112 AAMPQ13685 434 aa11.05□□□□□ -0.64
SHROOM4-203ENST00000460112 CARMIL2Q6F5E8 1435 aa11.04□□□□□ -0.64
SHROOM4-203ENST00000460112 LRRFIP1Q32MZ4 808 aaKnown RBP11.04□□□□□ -0.64
SHROOM4-203ENST00000460112 TPM1P09493 284 aa11.04□□□□□ -0.64
SHROOM4-203ENST00000460112 HIRIP3Q9BW71 556 aaPredicted RBP11.03□□□□□ -0.64
SHROOM4-203ENST00000460112 TCEAL9Q9UHQ7 104 aa11.03□□□□□ -0.64
SHROOM4-203ENST00000460112 PKNOX2Q96KN3 472 aa11.03□□□□□ -0.64
SHROOM4-203ENST00000460112 GPS2Q13227 327 aa11.03□□□□□ -0.64
SHROOM4-203ENST00000460112 KIF16BQ96L93 1317 aa11.02□□□□□ -0.64
SHROOM4-203ENST00000460112 PODXL2Q9NZ53 605 aa11.02□□□□□ -0.64
SHROOM4-203ENST00000460112 ITPRIPQ8IWB1 547 aa11.02□□□□□ -0.65
SHROOM4-203ENST00000460112 AMOTL1Q8IY63 956 aa11.02□□□□□ -0.65
SHROOM4-203ENST00000460112 MARCH6O60337 910 aa11.01□□□□□ -0.65
SHROOM4-203ENST00000460112 KAT6BQ8WYB5 2073 aa11.01□□□□□ -0.65
SHROOM4-203ENST00000460112 ATP6V1DQ9Y5K8 247 aa11.01□□□□□ -0.65
SHROOM4-203ENST00000460112 APPP05067 770 aa11.01□□□□□ -0.65
SHROOM4-203ENST00000460112 VPS53Q5VIR6 699 aa11.01□□□□□ -0.65
SHROOM4-203ENST00000460112 ST18O60284 1047 aa11□□□□□ -0.65
SHROOM4-203ENST00000460112 ARID3AQ99856 593 aa11□□□□□ -0.65
SHROOM4-203ENST00000460112 TERF2IPQ9NYB0 399 aa11□□□□□ -0.65
SHROOM4-203ENST00000460112 MTERF4Q7Z6M4 381 aaKnown RBP11□□□□□ -0.65
SHROOM4-203ENST00000460112 DCAF11Q8TEB1 546 aa11□□□□□ -0.65
SHROOM4-203ENST00000460112 TOP2AP11388 1531 aaKnown RBP11□□□□□ -0.65
SHROOM4-203ENST00000460112 CHMP3Q9Y3E7 222 aa10.99□□□□□ -0.65
SHROOM4-203ENST00000460112 RSPH4AQ5TD94 716 aa10.99□□□□□ -0.65
SHROOM4-203ENST00000460112 TPD52L1Q16890 204 aaPredicted RBP10.98□□□□□ -0.65
SHROOM4-203ENST00000460112 PAK3O75914 559 aaPredicted RBP10.98□□□□□ -0.65
SHROOM4-203ENST00000460112 RBM19Q9Y4C8 960 aaKnown RBP10.98□□□□□ -0.65
SHROOM4-203ENST00000460112 NOL10Q9BSC4 688 aaKnown RBP10.98□□□□□ -0.65
SHROOM4-203ENST00000460112 GOLGA6L3A6NEY3 463 aa10.98□□□□□ -0.65
SHROOM4-203ENST00000460112 TRHP20396 242 aaPredicted RBP10.98□□□□□ -0.65
SHROOM4-203ENST00000460112 EID1Q9Y6B2 187 aa10.98□□□□□ -0.65
SHROOM4-203ENST00000460112 UACAQ9BZF9 1416 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms