RNA–Protein interactions for RNA: ENST00000459954.1

UBQLN4-202, Transcript of ubiquilin 4, humanhuman

TSL 2

Gene UBQLN4, Length 502 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN4-202ENST00000459954 PLB1Q6P1J6 1458 aa8.69□□□□□ -1.02
UBQLN4-202ENST00000459954 KDM5BQ9UGL1 1544 aa8.69□□□□□ -1.02
UBQLN4-202ENST00000459954 ERCC6L2Q5T890 1561 aa8.69□□□□□ -1.02
UBQLN4-202ENST00000459954 MIA2Q96PC5 1412 aa8.68□□□□□ -1.02
UBQLN4-202ENST00000459954 TONSLQ96HA7 1378 aa8.65□□□□□ -1.02
UBQLN4-202ENST00000459954 PLEKHD1A6NEE1 506 aa8.65□□□□□ -1.02
UBQLN4-202ENST00000459954 SIN3AQ96ST3 1273 aa8.65□□□□□ -1.02
UBQLN4-202ENST00000459954 ABCA8O94911 1581 aa8.65□□□□□ -1.03
UBQLN4-202ENST00000459954 PTPRKQ15262 1439 aa8.64□□□□□ -1.03
UBQLN4-202ENST00000459954 P3H3Q8IVL6 736 aa8.64□□□□□ -1.03
UBQLN4-202ENST00000459954 ADCY10Q96PN6 1610 aa8.63□□□□□ -1.03
UBQLN4-202ENST00000459954 ANP32CO43423 234 aa8.63□□□□□ -1.03
UBQLN4-202ENST00000459954 TRHP20396 242 aaPredicted RBP8.63□□□□□ -1.03
UBQLN4-202ENST00000459954 MAGI3Q5TCQ9 1506 aa8.63□□□□□ -1.03
UBQLN4-202ENST00000459954 ABCC10Q5T3U5 1492 aa8.63□□□□□ -1.03
UBQLN4-202ENST00000459954 DDX10Q13206 875 aaKnown RBP8.62□□□□□ -1.03
UBQLN4-202ENST00000459954 EPRSP07814 1512 aaKnown RBP8.62□□□□□ -1.03
UBQLN4-202ENST00000459954 ASXL2Q76L83 1435 aa8.62□□□□□ -1.03
UBQLN4-202ENST00000459954 DNMT1P26358 1616 aaKnown RBP8.62□□□□□ -1.03
UBQLN4-202ENST00000459954 ROCK1Q13464 1354 aa8.61□□□□□ -1.03
UBQLN4-202ENST00000459954 ATP1B4Q9UN42 357 aaPredicted RBP8.61□□□□□ -1.03
UBQLN4-202ENST00000459954 ADGBQ8N7X0 1667 aa8.6□□□□□ -1.03
UBQLN4-202ENST00000459954 ITSN2Q9NZM3 1697 aa8.6□□□□□ -1.03
UBQLN4-202ENST00000459954 ATP10BO94823 1461 aa8.6□□□□□ -1.03
UBQLN4-202ENST00000459954 WDR7Q9Y4E6 1490 aa8.6□□□□□ -1.03
UBQLN4-202ENST00000459954 FAM69CQ0P6D2 419 aa8.6□□□□□ -1.03
UBQLN4-202ENST00000459954 RAPGEF6Q8TEU7 1601 aa8.6□□□□□ -1.03
UBQLN4-202ENST00000459954 NUP153P49790 1475 aaKnown RBP8.58□□□□□ -1.04
UBQLN4-202ENST00000459954 GLI2P10070 1586 aa8.58□□□□□ -1.04
UBQLN4-202ENST00000459954 ERICH6BQ5W0A0 696 aa8.57□□□□□ -1.04
UBQLN4-202ENST00000459954 TSHZ2Q9NRE2 1034 aa8.57□□□□□ -1.04
UBQLN4-202ENST00000459954 DENND4BO75064 1496 aaPredicted RBP8.57□□□□□ -1.04
UBQLN4-202ENST00000459954 CROCC2H7BZ55 1655 aa8.56□□□□□ -1.04
UBQLN4-202ENST00000459954 NEFLP07196 543 aa8.56□□□□□ -1.04
UBQLN4-202ENST00000459954 TEX14Q8IWB6 1497 aa8.56□□□□□ -1.04
UBQLN4-202ENST00000459954 KDM6BO15054 1643 aa8.55□□□□□ -1.04
UBQLN4-202ENST00000459954 ZCCHC11Q5TAX3 1644 aaKnown RBP8.55□□□□□ -1.04
UBQLN4-202ENST00000459954 KCNH8Q96L42 1107 aa8.55□□□□□ -1.04
UBQLN4-202ENST00000459954 RPRD2Q5VT52 1461 aaKnown RBP8.55□□□□□ -1.04
UBQLN4-202ENST00000459954 DAPK1P53355 1430 aa8.54□□□□□ -1.04
UBQLN4-202ENST00000459954 CD109Q6YHK3 1445 aa8.54□□□□□ -1.04
UBQLN4-202ENST00000459954 CDK13Q14004 1512 aaKnown RBP8.53□□□□□ -1.04
UBQLN4-202ENST00000459954 TROQ12816 1431 aaPredicted RBP8.53□□□□□ -1.04
UBQLN4-202ENST00000459954 CNTLNQ9NXG0 1405 aa8.53□□□□□ -1.04
UBQLN4-202ENST00000459954 DIP2BQ9P265 1576 aa8.52□□□□□ -1.04
UBQLN4-202ENST00000459954 ADGRL2O95490 1459 aa8.52□□□□□ -1.05
UBQLN4-202ENST00000459954 ANKRD30BQ9BXX2 1392 aa8.52□□□□□ -1.05
UBQLN4-202ENST00000459954 EIF4G2P78344 907 aaKnown RBP eCLIP8.52□□□□□ -1.05
UBQLN4-202ENST00000459954 MPHOSPH9Q99550 1183 aa8.52□□□□□ -1.05
UBQLN4-202ENST00000459954 NCOA1Q15788 1441 aa8.52□□□□□ -1.05
UBQLN4-202ENST00000459954 FKBP8Q14318 412 aa8.51□□□□□ -1.05
UBQLN4-202ENST00000459954 ARAP3Q8WWN8 1544 aa8.5□□□□□ -1.05
UBQLN4-202ENST00000459954 ABCC5O15440 1437 aa8.5□□□□□ -1.05
UBQLN4-202ENST00000459954 EFCAB2Q5VUJ9 269 aa8.5□□□□□ -1.05
UBQLN4-202ENST00000459954 NEO1Q92859 1461 aa8.5□□□□□ -1.05
UBQLN4-202ENST00000459954 SPATA31E1Q6ZUB1 1445 aa8.49□□□□□ -1.05
UBQLN4-202ENST00000459954 HSPA5P11021 654 aaKnown RBP8.49□□□□□ -1.05
UBQLN4-202ENST00000459954 RSPH4AQ5TD94 716 aa8.49□□□□□ -1.05
UBQLN4-202ENST00000459954 ARID4BQ4LE39 1312 aaPredicted RBP8.49□□□□□ -1.05
UBQLN4-202ENST00000459954 PLCH2O75038 1416 aa8.48□□□□□ -1.05
UBQLN4-202ENST00000459954 KIF14Q15058 1648 aa8.48□□□□□ -1.05
UBQLN4-202ENST00000459954 ABCA9Q8IUA7 1624 aa8.48□□□□□ -1.05
UBQLN4-202ENST00000459954 RRP7BPQ9NSQ0 103 aa8.48□□□□□ -1.05
UBQLN4-202ENST00000459954 CDC42BPAQ5VT25 1732 aa8.48□□□□□ -1.05
UBQLN4-202ENST00000459954 WASHC2AQ641Q2 1341 aa8.48□□□□□ -1.05
UBQLN4-202ENST00000459954 CCDC7Q96M83 1385 aa8.48□□□□□ -1.05
UBQLN4-202ENST00000459954 MBD5Q9P267 1494 aa8.47□□□□□ -1.05
UBQLN4-202ENST00000459954 TRIM52Q96A61 297 aa8.47□□□□□ -1.05
UBQLN4-202ENST00000459954 ANP32EQ9BTT0 268 aa8.47□□□□□ -1.05
UBQLN4-202ENST00000459954 KDM5DQ9BY66 1539 aa8.47□□□□□ -1.05
UBQLN4-202ENST00000459954 MAP3K4Q9Y6R4 1608 aa8.47□□□□□ -1.05
UBQLN4-202ENST00000459954 SHANK2Q9UPX8 1470 aa8.46□□□□□ -1.05
UBQLN4-202ENST00000459954 KIF13AQ9H1H9 1805 aa8.46□□□□□ -1.06
UBQLN4-202ENST00000459954 ARID3CA6NKF2 412 aa8.46□□□□□ -1.06
UBQLN4-202ENST00000459954 PZPP20742 1482 aa8.45□□□□□ -1.06
UBQLN4-202ENST00000459954 CAMSAP2Q08AD1 1489 aa8.45□□□□□ -1.06
UBQLN4-202ENST00000459954 ARHGEF12Q9NZN5 1544 aa8.45□□□□□ -1.06
UBQLN4-202ENST00000459954 L3MBTL2Q969R5 705 aa8.45□□□□□ -1.06
UBQLN4-202ENST00000459954 HIRIP3Q9BW71 556 aaPredicted RBP8.45□□□□□ -1.06
UBQLN4-202ENST00000459954 PLEKHH2Q8IVE3 1493 aa8.45□□□□□ -1.06
UBQLN4-202ENST00000459954 CFAP74Q9C0B2 1584 aa8.44□□□□□ -1.06
UBQLN4-202ENST00000459954 CHIC2Q9UKJ5 165 aa8.44□□□□□ -1.06
UBQLN4-202ENST00000459954 UHRF1BP1Q6BDS2 1440 aa8.44□□□□□ -1.06
UBQLN4-202ENST00000459954 KIAA1107Q9UPP5 1409 aa8.44□□□□□ -1.06
UBQLN4-202ENST00000459954 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP8.44□□□□□ -1.06
UBQLN4-202ENST00000459954 GPATCH8Q9UKJ3 1502 aaKnown RBP8.44□□□□□ -1.06
UBQLN4-202ENST00000459954 KDM5CP41229 1560 aa8.44□□□□□ -1.06
UBQLN4-202ENST00000459954 ARHGEF5Q12774 1597 aa8.44□□□□□ -1.06
UBQLN4-202ENST00000459954 PRKRIP1Q9H875 184 aaPredicted RBP8.43□□□□□ -1.06
UBQLN4-202ENST00000459954 CFDP1Q9UEE9 299 aaPredicted RBP8.43□□□□□ -1.06
UBQLN4-202ENST00000459954 ZBED9Q6R2W3 1325 aa8.43□□□□□ -1.06
UBQLN4-202ENST00000459954 FANCAO15360 1455 aa8.43□□□□□ -1.06
UBQLN4-202ENST00000459954 HNRNPUQ00839 825 aaKnown RBP eCLIP8.42□□□□□ -1.06
UBQLN4-202ENST00000459954 ROCK2O75116 1388 aaKnown RBP8.42□□□□□ -1.06
UBQLN4-202ENST00000459954 ANKRD30AQ9BXX3 1397 aa8.42□□□□□ -1.06
UBQLN4-202ENST00000459954 MAGI2Q86UL8 1455 aa8.42□□□□□ -1.06
UBQLN4-202ENST00000459954 BCORL1Q5H9F3 1711 aa8.42□□□□□ -1.06
UBQLN4-202ENST00000459954 E9PCH4 1651 aa8.41□□□□□ -1.06
UBQLN4-202ENST00000459954 KTN1Q86UP2 1357 aaKnown RBP8.41□□□□□ -1.06
UBQLN4-202ENST00000459954 RBM19Q9Y4C8 960 aaKnown RBP8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms