RNA–Protein interactions for RNA: ENST00000459931.1

NCDN-206, Transcript of neurochondrin, humanhuman

TSL 3

Gene NCDN, Length 1,041 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCDN-206ENST00000459931 ZFYVE16Q7Z3T8 1539 aa25.43■■□□□ 1.66
NCDN-206ENST00000459931 KIF14Q15058 1648 aa25.43■■□□□ 1.66
NCDN-206ENST00000459931 CASKIN1Q8WXD9 1431 aa25.42■■□□□ 1.66
NCDN-206ENST00000459931 MYO5CQ9NQX4 1742 aa25.41■■□□□ 1.66
NCDN-206ENST00000459931 MLECQ14165 292 aa25.41■■□□□ 1.66
NCDN-206ENST00000459931 ILDR1Q86SU0 546 aaPredicted RBP25.4■■□□□ 1.66
NCDN-206ENST00000459931 MADDQ8WXG6 1647 aa25.4■■□□□ 1.66
NCDN-206ENST00000459931 ARHGAP5Q13017 1502 aa25.39■■□□□ 1.66
NCDN-206ENST00000459931 PLPPR3Q6T4P5 718 aa25.39■■□□□ 1.66
NCDN-206ENST00000459931 MYT1LQ9UL68 1186 aa25.39■■□□□ 1.66
NCDN-206ENST00000459931 AFAP1Q8N556 730 aa25.38■■□□□ 1.65
NCDN-206ENST00000459931 CCDC18Q5T9S5 1454 aa25.37■■□□□ 1.65
NCDN-206ENST00000459931 LRRIQ1Q96JM4 1722 aa25.36■■□□□ 1.65
NCDN-206ENST00000459931 PCF11O94913 1555 aaKnown RBP25.35■■□□□ 1.65
NCDN-206ENST00000459931 ATP10AO60312 1499 aa25.34■■□□□ 1.65
NCDN-206ENST00000459931 ZNF518AQ6AHZ1 1483 aa25.32■■□□□ 1.64
NCDN-206ENST00000459931 RIMS1Q86UR5 1692 aaKnown RBP25.31■■□□□ 1.64
NCDN-206ENST00000459931 FYCO1Q9BQS8 1478 aa25.29■■□□□ 1.64
NCDN-206ENST00000459931 C9orf84Q5VXU9 1444 aa25.29■■□□□ 1.64
NCDN-206ENST00000459931 SIGLEC1Q9BZZ2 1709 aa25.26■■□□□ 1.63
NCDN-206ENST00000459931 ZNF777Q9ULD5 760 aaPredicted RBP25.25■■□□□ 1.63
NCDN-206ENST00000459931 CDC42BPBQ9Y5S2 1711 aa25.24■■□□□ 1.63
NCDN-206ENST00000459931 LMTK3Q96Q04 1460 aa25.21■■□□□ 1.63
NCDN-206ENST00000459931 KDM5CP41229 1560 aa25.2■■□□□ 1.62
NCDN-206ENST00000459931 HSPA2P54652 639 aa25.2■■□□□ 1.62
NCDN-206ENST00000459931 TRAPPC8Q9Y2L5 1435 aa25.2■■□□□ 1.62
NCDN-206ENST00000459931 PREX2Q70Z35 1606 aa25.19■■□□□ 1.62
NCDN-206ENST00000459931 MLH3Q9UHC1 1453 aa25.17■■□□□ 1.62
NCDN-206ENST00000459931 CEBPAP49715 358 aaPredicted RBP25.17■■□□□ 1.62
NCDN-206ENST00000459931 ARHGEF12Q9NZN5 1544 aa25.17■■□□□ 1.62
NCDN-206ENST00000459931 FER1L4A9Z1Z3 1794 aa25.16■■□□□ 1.62
NCDN-206ENST00000459931 ABCC1P33527 1531 aa25.15■■□□□ 1.62
NCDN-206ENST00000459931 ESF1Q9H501 851 aaKnown RBP25.14■■□□□ 1.62
NCDN-206ENST00000459931 CFDP1Q9UEE9 299 aaPredicted RBP25.14■■□□□ 1.62
NCDN-206ENST00000459931 MTUS2Q5JR59 1369 aa25.14■■□□□ 1.61
NCDN-206ENST00000459931 GPATCH8Q9UKJ3 1502 aaKnown RBP25.13■■□□□ 1.61
NCDN-206ENST00000459931 CDC42BPAQ5VT25 1732 aa25.13■■□□□ 1.61
NCDN-206ENST00000459931 HNRNPMP52272 730 aaKnown RBP eCLIP25.13■■□□□ 1.61
NCDN-206ENST00000459931 CCNB3Q8WWL7 1395 aa25.12■■□□□ 1.61
NCDN-206ENST00000459931 DIP2CQ9Y2E4 1556 aa25.12■■□□□ 1.61
NCDN-206ENST00000459931 ITSN2Q9NZM3 1697 aa25.09■■□□□ 1.61
NCDN-206ENST00000459931 SPAG9O60271 1321 aaKnown RBP25.09■■□□□ 1.61
NCDN-206ENST00000459931 ABCA6Q8N139 1617 aa25.08■■□□□ 1.6
NCDN-206ENST00000459931 CEP162Q5TB80 1403 aa25.07■■□□□ 1.6
NCDN-206ENST00000459931 REREQ9P2R6 1566 aa25.06■■□□□ 1.6
NCDN-206ENST00000459931 FBXO41Q8TF61 875 aa25.05■■□□□ 1.6
NCDN-206ENST00000459931 SAMD9LQ8IVG5 1584 aa25.04■■□□□ 1.6
NCDN-206ENST00000459931 SYCP2Q9BX26 1530 aa25.03■■□□□ 1.6
NCDN-206ENST00000459931 AGLP35573 1532 aa25.02■■□□□ 1.6
NCDN-206ENST00000459931 KIDINS220Q9ULH0 1771 aa25.02■■□□□ 1.6
NCDN-206ENST00000459931 KIAA1107Q9UPP5 1409 aa25.02■■□□□ 1.6
NCDN-206ENST00000459931 PLEKHH2Q8IVE3 1493 aa25.02■■□□□ 1.6
NCDN-206ENST00000459931 ZNF644Q9H582 1327 aaPredicted RBP24.98■■□□□ 1.59
NCDN-206ENST00000459931 LOC105371045A0A1W2PR82 267 aa24.98■■□□□ 1.59
NCDN-206ENST00000459931 UHRF1BP1Q6BDS2 1440 aa24.95■■□□□ 1.59
NCDN-206ENST00000459931 PREX1Q8TCU6 1659 aa24.95■■□□□ 1.58
NCDN-206ENST00000459931 EHBP1L1Q8N3D4 1523 aa24.94■■□□□ 1.58
NCDN-206ENST00000459931 SETD1BQ9UPS6 1966 aaKnown RBP24.93■■□□□ 1.58
NCDN-206ENST00000459931 DMRT2Q9Y5R5 561 aa24.93■■□□□ 1.58
NCDN-206ENST00000459931 CNTLNQ9NXG0 1405 aa24.93■■□□□ 1.58
NCDN-206ENST00000459931 ATP7AQ04656 1500 aa24.91■■□□□ 1.58
NCDN-206ENST00000459931 GGT6Q6P531 493 aa24.9■■□□□ 1.58
NCDN-206ENST00000459931 C3P01024 1663 aa24.89■■□□□ 1.58
NCDN-206ENST00000459931 A2MP01023 1474 aa24.89■■□□□ 1.57
NCDN-206ENST00000459931 TIAM1Q13009 1591 aa24.88■■□□□ 1.57
NCDN-206ENST00000459931 ZMYM3Q14202 1370 aa24.87■■□□□ 1.57
NCDN-206ENST00000459931 SUPT6HQ7KZ85 1726 aaKnown RBP24.86■■□□□ 1.57
NCDN-206ENST00000459931 CERKQ8TCT0 537 aa24.86■■□□□ 1.57
NCDN-206ENST00000459931 INO80Q9ULG1 1556 aaPredicted RBP24.84■■□□□ 1.57
NCDN-206ENST00000459931 MBD5Q9P267 1494 aa24.84■■□□□ 1.57
NCDN-206ENST00000459931 NCOA2Q15596 1464 aa24.83■■□□□ 1.57
NCDN-206ENST00000459931 RSPH4AQ5TD94 716 aa24.82■■□□□ 1.56
NCDN-206ENST00000459931 PPP6R1Q9UPN7 881 aa24.81■■□□□ 1.56
NCDN-206ENST00000459931 RTEL1-TNFRSF6BF6WH68 1400 aa24.8■■□□□ 1.56
NCDN-206ENST00000459931 VPS8Q8N3P4 1428 aa24.79■■□□□ 1.56
NCDN-206ENST00000459931 PLXNC1O60486 1568 aa24.79■■□□□ 1.56
NCDN-206ENST00000459931 NPATQ14207 1427 aa24.78■■□□□ 1.56
NCDN-206ENST00000459931 STRCQ7RTU9 1775 aa24.77■■□□□ 1.56
NCDN-206ENST00000459931 DHX29Q7Z478 1369 aaKnown RBP24.77■■□□□ 1.56
NCDN-206ENST00000459931 TSPY4P0CV99 314 aa24.76■■□□□ 1.55
NCDN-206ENST00000459931 TSPY10P0CW01 314 aa24.76■■□□□ 1.55
NCDN-206ENST00000459931 ADGBQ8N7X0 1667 aa24.75■■□□□ 1.55
NCDN-206ENST00000459931 CAMSAP2Q08AD1 1489 aa24.75■■□□□ 1.55
NCDN-206ENST00000459931 MROH2AA6NES4 1674 aa24.75■■□□□ 1.55
NCDN-206ENST00000459931 KIF3BO15066 747 aa24.74■■□□□ 1.55
NCDN-206ENST00000459931 CCDC141Q6ZP82 1450 aa24.74■■□□□ 1.55
NCDN-206ENST00000459931 CLTCQ00610 1675 aaKnown RBP24.73■■□□□ 1.55
NCDN-206ENST00000459931 LRRC9Q6ZRR7 1453 aa24.73■■□□□ 1.55
NCDN-206ENST00000459931 KANK4Q5T7N3 995 aaPredicted RBP24.72■■□□□ 1.55
NCDN-206ENST00000459931 PTPRTO14522 1441 aa24.7■■□□□ 1.55
NCDN-206ENST00000459931 PTPRKQ15262 1439 aa24.69■■□□□ 1.54
NCDN-206ENST00000459931 NCOA1Q15788 1441 aa24.68■■□□□ 1.54
NCDN-206ENST00000459931 WASHC2CQ9Y4E1 1318 aa24.66■■□□□ 1.54
NCDN-206ENST00000459931 APLP2Q06481 763 aa24.66■■□□□ 1.54
NCDN-206ENST00000459931 NCKAP5LQ9HCH0 1330 aa24.65■■□□□ 1.54
NCDN-206ENST00000459931 CAMSAP1Q5T5Y3 1602 aa24.65■■□□□ 1.54
NCDN-206ENST00000459931 MAP3K1Q13233 1512 aa24.63■■□□□ 1.53
NCDN-206ENST00000459931 ARHGEF5Q12774 1597 aa24.62■■□□□ 1.53
NCDN-206ENST00000459931 FBXO31Q5XUX0 539 aaPredicted RBP24.61■■□□□ 1.53
NCDN-206ENST00000459931 PKD2Q13563 968 aa24.6■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms