RNA–Protein interactions for RNA: ENST00000459741.5

TRAPPC10-204, Transcript of trafficking protein particle complex 10, humanhuman

TSL 2

Gene TRAPPC10, Length 5,826 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC10-204ENST00000459741 LMOD2Q6P5Q4 547 aa14.58□□□□□ -0.07
TRAPPC10-204ENST00000459741 ZRSR1Q15695 479 aaKnown RBP14.58□□□□□ -0.08
TRAPPC10-204ENST00000459741 FMN1Q68DA7 1419 aa14.57□□□□□ -0.08
TRAPPC10-204ENST00000459741 GBP4Q96PP9 640 aa14.56□□□□□ -0.08
TRAPPC10-204ENST00000459741 CUX2O14529 1486 aa14.56□□□□□ -0.08
TRAPPC10-204ENST00000459741 NEUROD2Q15784 382 aa14.56□□□□□ -0.08
TRAPPC10-204ENST00000459741 ROCK2O75116 1388 aaKnown RBP14.55□□□□□ -0.08
TRAPPC10-204ENST00000459741 CHAF1AQ13111 956 aaPredicted RBP14.54□□□□□ -0.08
TRAPPC10-204ENST00000459741 DCAF11Q8TEB1 546 aa14.54□□□□□ -0.08
TRAPPC10-204ENST00000459741 RSPH6AQ9H0K4 717 aa14.53□□□□□ -0.08
TRAPPC10-204ENST00000459741 GOLGA6L3A6NEY3 463 aa14.52□□□□□ -0.08
TRAPPC10-204ENST00000459741 ZBED9Q6R2W3 1325 aa14.52□□□□□ -0.08
TRAPPC10-204ENST00000459741 TOP2AP11388 1531 aaKnown RBP14.52□□□□□ -0.09
TRAPPC10-204ENST00000459741 MPHOSPH9Q99550 1183 aa14.51□□□□□ -0.09
TRAPPC10-204ENST00000459741 GOLGA6L6A8MZA4 724 aa14.51□□□□□ -0.09
TRAPPC10-204ENST00000459741 RWDD1Q9H446 243 aaPredicted RBP14.51□□□□□ -0.09
TRAPPC10-204ENST00000459741 PHLDB1Q86UU1 1377 aa14.5□□□□□ -0.09
TRAPPC10-204ENST00000459741 TPRNQ4KMQ1 711 aa14.49□□□□□ -0.09
TRAPPC10-204ENST00000459741 PMFBP1Q8TBY8 1022 aa14.49□□□□□ -0.09
TRAPPC10-204ENST00000459741 NRDCO43847 1150 aa14.49□□□□□ -0.09
TRAPPC10-204ENST00000459741 NLRP13Q86W25 1043 aa14.48□□□□□ -0.09
TRAPPC10-204ENST00000459741 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.48□□□□□ -0.09
TRAPPC10-204ENST00000459741 TAOK2Q9UL54 1235 aa14.48□□□□□ -0.09
TRAPPC10-204ENST00000459741 GSE1Q14687 1217 aa14.47□□□□□ -0.09
TRAPPC10-204ENST00000459741 SLKQ9H2G2 1235 aaPredicted RBP14.46□□□□□ -0.09
TRAPPC10-204ENST00000459741 POGKQ9P215 609 aa14.46□□□□□ -0.09
TRAPPC10-204ENST00000459741 MCCP23508 829 aa14.46□□□□□ -0.1
TRAPPC10-204ENST00000459741 PDE4AP27815 886 aa14.46□□□□□ -0.1
TRAPPC10-204ENST00000459741 PKD2Q13563 968 aa14.46□□□□□ -0.1
TRAPPC10-204ENST00000459741 IPO8O15397 1037 aaKnown RBP14.46□□□□□ -0.1
TRAPPC10-204ENST00000459741 PLCB2Q00722 1185 aa14.46□□□□□ -0.1
TRAPPC10-204ENST00000459741 L3MBTL2Q969R5 705 aa14.45□□□□□ -0.1
TRAPPC10-204ENST00000459741 GOLGA2Q08379 1002 aa14.44□□□□□ -0.1
TRAPPC10-204ENST00000459741 KIF15Q9NS87 1388 aa14.44□□□□□ -0.1
TRAPPC10-204ENST00000459741 PRKRIP1Q9H875 184 aaPredicted RBP14.44□□□□□ -0.1
TRAPPC10-204ENST00000459741 SPRYD3Q8NCJ5 442 aa14.43□□□□□ -0.1
TRAPPC10-204ENST00000459741 CENPQQ7L2Z9 268 aaPredicted RBP14.43□□□□□ -0.1
TRAPPC10-204ENST00000459741 OS9Q13438 667 aaPredicted RBP14.42□□□□□ -0.1
TRAPPC10-204ENST00000459741 KIAA2012Q0VF49 1180 aa14.42□□□□□ -0.1
TRAPPC10-204ENST00000459741 MORC1Q86VD1 984 aa14.42□□□□□ -0.1
TRAPPC10-204ENST00000459741 RAPGEF2Q9Y4G8 1499 aa14.42□□□□□ -0.1
TRAPPC10-204ENST00000459741 TRHP20396 242 aaPredicted RBP14.41□□□□□ -0.1
TRAPPC10-204ENST00000459741 FAM161AQ3B820 660 aa14.41□□□□□ -0.1
TRAPPC10-204ENST00000459741 MYBBP1AQ9BQG0 1328 aaKnown RBP14.41□□□□□ -0.1
TRAPPC10-204ENST00000459741 U2SURPO15042 1029 aaKnown RBP14.41□□□□□ -0.1
TRAPPC10-204ENST00000459741 GZF1Q9H116 711 aaPredicted RBP14.41□□□□□ -0.1
TRAPPC10-204ENST00000459741 SYAP1Q96A49 352 aaPredicted RBP14.4□□□□□ -0.1
TRAPPC10-204ENST00000459741 WIZO95785 1651 aa14.4□□□□□ -0.1
TRAPPC10-204ENST00000459741 RRP1P56182 461 aaKnown RBP14.4□□□□□ -0.1
TRAPPC10-204ENST00000459741 SMARCA2P51531 1590 aa14.4□□□□□ -0.11
TRAPPC10-204ENST00000459741 FGD1P98174 961 aa14.39□□□□□ -0.11
TRAPPC10-204ENST00000459741 GOLGA6L4A6NEF3 574 aa14.39□□□□□ -0.11
TRAPPC10-204ENST00000459741 DDX11L8A8MPP1 907 aa14.39□□□□□ -0.11
TRAPPC10-204ENST00000459741 FOXD1Q16676 465 aa14.39□□□□□ -0.11
TRAPPC10-204ENST00000459741 NCBP3Q53F19 620 aaKnown RBP14.38□□□□□ -0.11
TRAPPC10-204ENST00000459741 ANKRD30AQ9BXX3 1397 aa14.38□□□□□ -0.11
TRAPPC10-204ENST00000459741 HSP90AA2PQ14568 343 aaPredicted RBP14.38□□□□□ -0.11
TRAPPC10-204ENST00000459741 NAP1L2Q9ULW6 460 aaPredicted RBP14.37□□□□□ -0.11
TRAPPC10-204ENST00000459741 KANK1Q14678 1352 aa14.37□□□□□ -0.11
TRAPPC10-204ENST00000459741 CLSTN1O94985 981 aa14.37□□□□□ -0.11
TRAPPC10-204ENST00000459741 EIF4G1Q04637 1599 aaKnown RBP14.37□□□□□ -0.11
TRAPPC10-204ENST00000459741 CALD1Q05682 793 aaKnown RBP14.35□□□□□ -0.11
TRAPPC10-204ENST00000459741 KCNJ4P48050 445 aa14.35□□□□□ -0.11
TRAPPC10-204ENST00000459741 NUP155O75694 1391 aa14.34□□□□□ -0.11
TRAPPC10-204ENST00000459741 CENPJQ9HC77 1338 aaPredicted RBP14.34□□□□□ -0.11
TRAPPC10-204ENST00000459741 MFAP1P55081 439 aaKnown RBP14.33□□□□□ -0.12
TRAPPC10-204ENST00000459741 EIF3AQ14152 1382 aaKnown RBP14.33□□□□□ -0.12
TRAPPC10-204ENST00000459741 SKOR2Q2VWA4 1001 aaPredicted RBP14.33□□□□□ -0.12
TRAPPC10-204ENST00000459741 ISY1Q9ULR0 285 aaKnown RBP14.33□□□□□ -0.12
TRAPPC10-204ENST00000459741 EXOC6Q8TAG9 804 aa14.33□□□□□ -0.12
TRAPPC10-204ENST00000459741 ITPRIPQ8IWB1 547 aa14.32□□□□□ -0.12
TRAPPC10-204ENST00000459741 DRC7Q8IY82 874 aa14.32□□□□□ -0.12
TRAPPC10-204ENST00000459741 CCDC18Q5T9S5 1454 aa14.31□□□□□ -0.12
TRAPPC10-204ENST00000459741 MLECQ14165 292 aa14.31□□□□□ -0.12
TRAPPC10-204ENST00000459741 HDGFP51858 240 aaKnown RBP14.3□□□□□ -0.12
TRAPPC10-204ENST00000459741 CGNL1Q0VF96 1302 aa14.3□□□□□ -0.12
TRAPPC10-204ENST00000459741 SOX12O15370 315 aa14.29□□□□□ -0.12
TRAPPC10-204ENST00000459741 RUSC2Q8N2Y8 1516 aa14.29□□□□□ -0.12
TRAPPC10-204ENST00000459741 NGEFQ8N5V2 710 aa14.28□□□□□ -0.12
TRAPPC10-204ENST00000459741 FHOD3Q2V2M9 1422 aa14.28□□□□□ -0.12
TRAPPC10-204ENST00000459741 CNTLNQ9NXG0 1405 aa14.27□□□□□ -0.13
TRAPPC10-204ENST00000459741 PHF14O94880 888 aa14.27□□□□□ -0.13
TRAPPC10-204ENST00000459741 U2AF1L5P0DN76 240 aaPredicted RBP14.27□□□□□ -0.13
TRAPPC10-204ENST00000459741 U2AF1Q01081 240 aaKnown RBP eCLIP14.27□□□□□ -0.13
TRAPPC10-204ENST00000459741 HTATSF1O43719 755 aaKnown RBP14.26□□□□□ -0.13
TRAPPC10-204ENST00000459741 CRBNQ96SW2 442 aa14.26□□□□□ -0.13
TRAPPC10-204ENST00000459741 ERCC6Q03468 1493 aa14.26□□□□□ -0.13
TRAPPC10-204ENST00000459741 SMC4Q9NTJ3 1288 aa14.26□□□□□ -0.13
TRAPPC10-204ENST00000459741 CSPP1Q1MSJ5 1256 aa14.26□□□□□ -0.13
TRAPPC10-204ENST00000459741 E9PSI1 815 aa14.25□□□□□ -0.13
TRAPPC10-204ENST00000459741 KIAA1211Q6ZU35 1233 aa14.25□□□□□ -0.13
TRAPPC10-204ENST00000459741 USP47Q96K76 1375 aa14.25□□□□□ -0.13
TRAPPC10-204ENST00000459741 CCDC7Q96M83 1385 aa14.24□□□□□ -0.13
TRAPPC10-204ENST00000459741 SLC4A3P48751 1232 aa14.23□□□□□ -0.13
TRAPPC10-204ENST00000459741 ST18O60284 1047 aa14.23□□□□□ -0.13
TRAPPC10-204ENST00000459741 CARMIL2Q6F5E8 1435 aa14.23□□□□□ -0.13
TRAPPC10-204ENST00000459741 SRPK2P78362 688 aaKnown RBP14.23□□□□□ -0.13
TRAPPC10-204ENST00000459741 RSPH4AQ5TD94 716 aa14.23□□□□□ -0.13
TRAPPC10-204ENST00000459741 VSIG10Q8N0Z9 540 aa14.23□□□□□ -0.13
TRAPPC10-204ENST00000459741 UACAQ9BZF9 1416 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms