RNA–Protein interactions for RNA: ENST00000458564.5

HDLBP-227, Transcript of high density lipoprotein binding protein, humanhuman

TSL 3

Gene HDLBP, Length 420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-227ENST00000458564 UBTFP17480 764 aaKnown RBP17.32■□□□□ 0.36
HDLBP-227ENST00000458564 CDK11AQ9UQ88 783 aaPredicted RBP17.32■□□□□ 0.36
HDLBP-227ENST00000458564 MYO5CQ9NQX4 1742 aa17.32■□□□□ 0.36
HDLBP-227ENST00000458564 TROQ12816 1431 aaPredicted RBP17.31■□□□□ 0.36
HDLBP-227ENST00000458564 KIF14Q15058 1648 aa17.31■□□□□ 0.36
HDLBP-227ENST00000458564 ATP10AO60312 1499 aa17.31■□□□□ 0.36
HDLBP-227ENST00000458564 C9orf84Q5VXU9 1444 aa17.3■□□□□ 0.36
HDLBP-227ENST00000458564 EFCAB2Q5VUJ9 269 aa17.3■□□□□ 0.36
HDLBP-227ENST00000458564 ARHGEF12Q9NZN5 1544 aa17.3■□□□□ 0.36
HDLBP-227ENST00000458564 ZNF518AQ6AHZ1 1483 aa17.3■□□□□ 0.36
HDLBP-227ENST00000458564 KDM5CP41229 1560 aa17.28■□□□□ 0.36
HDLBP-227ENST00000458564 FER1L4A9Z1Z3 1794 aa17.28■□□□□ 0.36
HDLBP-227ENST00000458564 CLIP1P30622 1438 aa17.27■□□□□ 0.35
HDLBP-227ENST00000458564 CHIC1Q5VXU3 224 aa17.25■□□□□ 0.35
HDLBP-227ENST00000458564 ATP1B4Q9UN42 357 aaPredicted RBP17.25■□□□□ 0.35
HDLBP-227ENST00000458564 ARHGAP5Q13017 1502 aa17.25■□□□□ 0.35
HDLBP-227ENST00000458564 HSPA2P54652 639 aa17.23■□□□□ 0.35
HDLBP-227ENST00000458564 MLECQ14165 292 aa17.23■□□□□ 0.35
HDLBP-227ENST00000458564 LRRIQ1Q96JM4 1722 aa17.23■□□□□ 0.35
HDLBP-227ENST00000458564 REREQ9P2R6 1566 aa17.23■□□□□ 0.35
HDLBP-227ENST00000458564 EHMT2Q96KQ7 1210 aa17.22■□□□□ 0.35
HDLBP-227ENST00000458564 CCDC18Q5T9S5 1454 aa17.21■□□□□ 0.35
HDLBP-227ENST00000458564 CASKIN1Q8WXD9 1431 aa17.21■□□□□ 0.34
HDLBP-227ENST00000458564 DIP2CQ9Y2E4 1556 aa17.2■□□□□ 0.34
HDLBP-227ENST00000458564 MLH3Q9UHC1 1453 aa17.2■□□□□ 0.34
HDLBP-227ENST00000458564 PREX2Q70Z35 1606 aa17.19■□□□□ 0.34
HDLBP-227ENST00000458564 AFAP1Q8N556 730 aa17.19■□□□□ 0.34
HDLBP-227ENST00000458564 PREX1Q8TCU6 1659 aa17.19■□□□□ 0.34
HDLBP-227ENST00000458564 CDC42BPBQ9Y5S2 1711 aa17.18■□□□□ 0.34
HDLBP-227ENST00000458564 ABCC1P33527 1531 aa17.18■□□□□ 0.34
HDLBP-227ENST00000458564 PLPPR3Q6T4P5 718 aa17.18■□□□□ 0.34
HDLBP-227ENST00000458564 ABCA6Q8N139 1617 aa17.16■□□□□ 0.34
HDLBP-227ENST00000458564 AGLP35573 1532 aa17.16■□□□□ 0.34
HDLBP-227ENST00000458564 FYCO1Q9BQS8 1478 aa17.14■□□□□ 0.33
HDLBP-227ENST00000458564 TRAPPC8Q9Y2L5 1435 aa17.13■□□□□ 0.33
HDLBP-227ENST00000458564 ITSN2Q9NZM3 1697 aa17.13■□□□□ 0.33
HDLBP-227ENST00000458564 UHRF1BP1Q6BDS2 1440 aa17.12■□□□□ 0.33
HDLBP-227ENST00000458564 CEBPAP49715 358 aaPredicted RBP17.11■□□□□ 0.33
HDLBP-227ENST00000458564 CERKQ8TCT0 537 aa17.11■□□□□ 0.33
HDLBP-227ENST00000458564 CDC42BPAQ5VT25 1732 aa17.1■□□□□ 0.33
HDLBP-227ENST00000458564 SETD1BQ9UPS6 1966 aaKnown RBP17.09■□□□□ 0.33
HDLBP-227ENST00000458564 KIDINS220Q9ULH0 1771 aa17.08■□□□□ 0.33
HDLBP-227ENST00000458564 MYT1LQ9UL68 1186 aa17.08■□□□□ 0.32
HDLBP-227ENST00000458564 STRCQ7RTU9 1775 aa17.07■□□□□ 0.32
HDLBP-227ENST00000458564 C3P01024 1663 aa17.07■□□□□ 0.32
HDLBP-227ENST00000458564 CNTLNQ9NXG0 1405 aa17.07■□□□□ 0.32
HDLBP-227ENST00000458564 DMRT2Q9Y5R5 561 aa17.06■□□□□ 0.32
HDLBP-227ENST00000458564 SAMD9LQ8IVG5 1584 aa17.06■□□□□ 0.32
HDLBP-227ENST00000458564 GPATCH8Q9UKJ3 1502 aaKnown RBP17.05■□□□□ 0.32
HDLBP-227ENST00000458564 SYCP2Q9BX26 1530 aa17.03■□□□□ 0.32
HDLBP-227ENST00000458564 PTPRTO14522 1441 aa17.03■□□□□ 0.32
HDLBP-227ENST00000458564 KIAA1107Q9UPP5 1409 aa17.02■□□□□ 0.31
HDLBP-227ENST00000458564 ESF1Q9H501 851 aaKnown RBP17.01■□□□□ 0.31
HDLBP-227ENST00000458564 NPATQ14207 1427 aa17.01■□□□□ 0.31
HDLBP-227ENST00000458564 PLEKHH2Q8IVE3 1493 aa17■□□□□ 0.31
HDLBP-227ENST00000458564 MROH2AA6NES4 1674 aa17■□□□□ 0.31
HDLBP-227ENST00000458564 PLXNC1O60486 1568 aa16.99■□□□□ 0.31
HDLBP-227ENST00000458564 SPAG9O60271 1321 aaKnown RBP16.98■□□□□ 0.31
HDLBP-227ENST00000458564 INO80Q9ULG1 1556 aaPredicted RBP16.98■□□□□ 0.31
HDLBP-227ENST00000458564 ATP7AQ04656 1500 aa16.98■□□□□ 0.31
HDLBP-227ENST00000458564 NCOA1Q15788 1441 aa16.97■□□□□ 0.31
HDLBP-227ENST00000458564 ZNF777Q9ULD5 760 aaPredicted RBP16.96■□□□□ 0.31
HDLBP-227ENST00000458564 CCNB3Q8WWL7 1395 aa16.95■□□□□ 0.3
HDLBP-227ENST00000458564 CFDP1Q9UEE9 299 aaPredicted RBP16.95■□□□□ 0.3
HDLBP-227ENST00000458564 A2MP01023 1474 aa16.94■□□□□ 0.3
HDLBP-227ENST00000458564 HNRNPMP52272 730 aaKnown RBP eCLIP16.94■□□□□ 0.31e-10■□□□□ 10.4
HDLBP-227ENST00000458564 ZMYM3Q14202 1370 aa16.93■□□□□ 0.3
HDLBP-227ENST00000458564 MTUS2Q5JR59 1369 aa16.93■□□□□ 0.3
HDLBP-227ENST00000458564 LTBP4Q8N2S1 1624 aa16.93■□□□□ 0.3
HDLBP-227ENST00000458564 IQSEC2Q5JU85 1478 aa16.93■□□□□ 0.3
HDLBP-227ENST00000458564 SUPT6HQ7KZ85 1726 aaKnown RBP16.91■□□□□ 0.3
HDLBP-227ENST00000458564 EHBP1L1Q8N3D4 1523 aa16.91■□□□□ 0.3
HDLBP-227ENST00000458564 TIAM1Q13009 1591 aa16.9■□□□□ 0.3
HDLBP-227ENST00000458564 CAMSAP1Q5T5Y3 1602 aa16.9■□□□□ 0.3
HDLBP-227ENST00000458564 ZNF142P52746 1687 aaPredicted RBP16.89■□□□□ 0.29
HDLBP-227ENST00000458564 MBD5Q9P267 1494 aa16.89■□□□□ 0.29
HDLBP-227ENST00000458564 PTPRKQ15262 1439 aa16.88■□□□□ 0.29
HDLBP-227ENST00000458564 CEP162Q5TB80 1403 aa16.88■□□□□ 0.29
HDLBP-227ENST00000458564 CLTCQ00610 1675 aaKnown RBP16.88■□□□□ 0.29
HDLBP-227ENST00000458564 ADGBQ8N7X0 1667 aa16.88■□□□□ 0.29
HDLBP-227ENST00000458564 PLA2R1Q13018 1463 aa16.88■□□□□ 0.29
HDLBP-227ENST00000458564 PPP6R1Q9UPN7 881 aa16.88■□□□□ 0.29
HDLBP-227ENST00000458564 MYO3AQ8NEV4 1616 aa16.88■□□□□ 0.29
HDLBP-227ENST00000458564 RTEL1-TNFRSF6BF6WH68 1400 aa16.87■□□□□ 0.29
HDLBP-227ENST00000458564 CEP170BQ9Y4F5 1589 aaPredicted RBP16.85■□□□□ 0.29
HDLBP-227ENST00000458564 TCOF1Q13428 1488 aaKnown RBP16.85■□□□□ 0.29
HDLBP-227ENST00000458564 ZNF644Q9H582 1327 aaPredicted RBP16.84■□□□□ 0.29
HDLBP-227ENST00000458564 FAM135AQ9P2D6 1515 aa16.82■□□□□ 0.28
HDLBP-227ENST00000458564 PKD2Q13563 968 aa16.82■□□□□ 0.28
HDLBP-227ENST00000458564 GGT6Q6P531 493 aa16.82■□□□□ 0.28
HDLBP-227ENST00000458564 DHX29Q7Z478 1369 aaKnown RBP16.81■□□□□ 0.28
HDLBP-227ENST00000458564 CCDC141Q6ZP82 1450 aa16.8■□□□□ 0.28
HDLBP-227ENST00000458564 NCKAP5LQ9HCH0 1330 aa16.79■□□□□ 0.28
HDLBP-227ENST00000458564 A2ML1A8K2U0 1454 aa16.79■□□□□ 0.28
HDLBP-227ENST00000458564 NCOA2Q15596 1464 aa16.79■□□□□ 0.28
HDLBP-227ENST00000458564 DISP3Q9P2K9 1392 aa16.78■□□□□ 0.28
HDLBP-227ENST00000458564 ZNF335Q9H4Z2 1342 aaPredicted RBP16.77■□□□□ 0.28
HDLBP-227ENST00000458564 CAMSAP2Q08AD1 1489 aa16.77■□□□□ 0.28
HDLBP-227ENST00000458564 KDM5DQ9BY66 1539 aa16.76■□□□□ 0.27
HDLBP-227ENST00000458564 RSPH4AQ5TD94 716 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms