RNA–Protein interactions for RNA: ENST00000457435.1

LINC01546-201, Transcript of long intergenic non-protein coding RNA 1546, humanhuman

TSL 2 BASIC

Gene LINC01546, Length 674 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01546-201ENST00000457435 ERBB3P21860 1342 aa10.95□□□□□ -0.66
LINC01546-201ENST00000457435 TMEM92Q6UXU6 159 aa10.94□□□□□ -0.66
LINC01546-201ENST00000457435 STK25O00506 426 aa10.93□□□□□ -0.66
LINC01546-201ENST00000457435 KRTAP3-3Q9BYR6 98 aa10.91□□□□□ -0.66
LINC01546-201ENST00000457435 KRTAP3-2Q9BYR7 98 aa10.91□□□□□ -0.66
LINC01546-201ENST00000457435 VARS2Q5ST30 1063 aaKnown RBP10.86□□□□□ -0.67
LINC01546-201ENST00000457435 FBXO22Q8NEZ5 403 aa10.86□□□□□ -0.67
LINC01546-201ENST00000457435 PKD2Q13563 968 aa10.85□□□□□ -0.67
LINC01546-201ENST00000457435 ZSWIM6Q9HCJ5 1215 aa10.85□□□□□ -0.67
LINC01546-201ENST00000457435 MFRPQ9BY79 579 aa10.84□□□□□ -0.67
LINC01546-201ENST00000457435 RGL2O15211 777 aa10.83□□□□□ -0.68
LINC01546-201ENST00000457435 ARSIQ5FYB1 569 aa10.81□□□□□ -0.68
LINC01546-201ENST00000457435 GPR153Q6NV75 609 aa10.81□□□□□ -0.68
LINC01546-201ENST00000457435 KHSRPQ92945 711 aaKnown RBP eCLIP10.76□□□□□ -0.69
LINC01546-201ENST00000457435 C2orf72A6NCS6 295 aa10.75□□□□□ -0.69
LINC01546-201ENST00000457435 ZNF687Q8N1G0 1237 aa10.75□□□□□ -0.69
LINC01546-201ENST00000457435 TMC2Q8TDI7 906 aa10.72□□□□□ -0.69
LINC01546-201ENST00000457435 ZNF316A6NFI3 1004 aaPredicted RBP10.71□□□□□ -0.69
LINC01546-201ENST00000457435 KIF3CO14782 793 aa10.69□□□□□ -0.7
LINC01546-201ENST00000457435 ANKRD13DQ6ZTN6 518 aa10.69□□□□□ -0.7
LINC01546-201ENST00000457435 PPP1R37O75864 691 aa10.68□□□□□ -0.7
LINC01546-201ENST00000457435 RNF166Q96A37 237 aaPredicted RBP10.68□□□□□ -0.7
LINC01546-201ENST00000457435 NUDT7P0C024 238 aa10.67□□□□□ -0.7
LINC01546-201ENST00000457435 MYT1LQ9UL68 1186 aa10.66□□□□□ -0.7
LINC01546-201ENST00000457435 PCDHGA4Q9Y5G9 962 aa10.64□□□□□ -0.71
LINC01546-201ENST00000457435 LHX6Q9UPM6 363 aa10.61□□□□□ -0.71
LINC01546-201ENST00000457435 SLC34A2O95436 690 aa10.6□□□□□ -0.71
LINC01546-201ENST00000457435 CHGAP10645 457 aaKnown RBP10.6□□□□□ -0.71
LINC01546-201ENST00000457435 LSM11P83369 360 aaKnown RBP eCLIP10.58□□□□□ -0.72
LINC01546-201ENST00000457435 HS6ST3Q8IZP7 471 aa10.58□□□□□ -0.72
LINC01546-201ENST00000457435 PTGER2P43116 358 aa10.57□□□□□ -0.72
LINC01546-201ENST00000457435 AXIN2Q9Y2T1 843 aa10.56□□□□□ -0.72
LINC01546-201ENST00000457435 PBX2P40425 430 aa10.54□□□□□ -0.72
LINC01546-201ENST00000457435 PLPP6Q8IY26 295 aa10.54□□□□□ -0.72
LINC01546-201ENST00000457435 FOXK1P85037 733 aa10.5□□□□□ -0.73
LINC01546-201ENST00000457435 GPHNQ9NQX3 736 aaPredicted RBP10.5□□□□□ -0.73
LINC01546-201ENST00000457435 PSDA5PKW4 1024 aaPredicted RBP10.49□□□□□ -0.73
LINC01546-201ENST00000457435 TBC1D12O60347 775 aa10.49□□□□□ -0.73
LINC01546-201ENST00000457435 POTEEQ6S8J3 1075 aa10.49□□□□□ -0.73
LINC01546-201ENST00000457435 PTCD2Q8WV60 388 aaKnown RBP10.49□□□□□ -0.73
LINC01546-201ENST00000457435 DSG2Q14126 1118 aa10.48□□□□□ -0.73
LINC01546-201ENST00000457435 ARHGAP33O14559 1287 aa10.47□□□□□ -0.73
LINC01546-201ENST00000457435 NKX1-1Q15270 411 aaPredicted RBP10.46□□□□□ -0.73
LINC01546-201ENST00000457435 RYDENQ9NUL5 291 aaKnown RBP10.45□□□□□ -0.74
LINC01546-201ENST00000457435 KDM4FA0A1W2PPD8 638 aa10.42□□□□□ -0.74
LINC01546-201ENST00000457435 PPP4R3BQ5MIZ7 849 aa10.42□□□□□ -0.74
LINC01546-201ENST00000457435 ADGRD1Q6QNK2 874 aa10.42□□□□□ -0.74
LINC01546-201ENST00000457435 DNAJC5Q9H3Z4 198 aa10.42□□□□□ -0.74
LINC01546-201ENST00000457435 PSEN2P49810 448 aa10.41□□□□□ -0.74
LINC01546-201ENST00000457435 UPF1Q92900 1129 aaKnown RBP eCLIP10.41□□□□□ -0.74
LINC01546-201ENST00000457435 STAC3Q96MF2 364 aa10.39□□□□□ -0.75
LINC01546-201ENST00000457435 DCAF8L2P0C7V8 631 aa10.38□□□□□ -0.75
LINC01546-201ENST00000457435 DMRTA1Q5VZB9 504 aa10.38□□□□□ -0.75
LINC01546-201ENST00000457435 KCNH8Q96L42 1107 aa10.37□□□□□ -0.75
LINC01546-201ENST00000457435 HCSTQ9UBK5 93 aa10.36□□□□□ -0.75
LINC01546-201ENST00000457435 TK2O00142 265 aa10.35□□□□□ -0.75
LINC01546-201ENST00000457435 PPP1R15BQ5SWA1 713 aa10.35□□□□□ -0.75
LINC01546-201ENST00000457435 OXER1Q8TDS5 423 aa10.35□□□□□ -0.75
LINC01546-201ENST00000457435 KCNK17Q96T54 332 aa10.35□□□□□ -0.75
LINC01546-201ENST00000457435 PDE4AP27815 886 aa10.34□□□□□ -0.75
LINC01546-201ENST00000457435 CRISPLD2Q9H0B8 497 aa10.34□□□□□ -0.75
LINC01546-201ENST00000457435 ZNF454Q8N9F8 522 aa10.33□□□□□ -0.76
LINC01546-201ENST00000457435 LARP6Q9BRS8 491 aaKnown RBP10.3□□□□□ -0.76
LINC01546-201ENST00000457435 PLA2G2EQ9NZK7 142 aa10.3□□□□□ -0.76
LINC01546-201ENST00000457435 HRO43593 1189 aa10.29□□□□□ -0.76
LINC01546-201ENST00000457435 GTPBP6O43824 516 aaPredicted RBP10.29□□□□□ -0.76
LINC01546-201ENST00000457435 KCTD12Q96CX2 325 aaKnown RBP10.29□□□□□ -0.76
LINC01546-201ENST00000457435 NCKAP5LQ9HCH0 1330 aa10.29□□□□□ -0.76
LINC01546-201ENST00000457435 DDX27Q96GQ7 796 aaKnown RBP10.25□□□□□ -0.77
LINC01546-201ENST00000457435 EVI5O60447 810 aa10.24□□□□□ -0.77
LINC01546-201ENST00000457435 MAP3K9P80192 1104 aa10.24□□□□□ -0.77
LINC01546-201ENST00000457435 VPS9D1Q9Y2B5 631 aa10.24□□□□□ -0.77
LINC01546-201ENST00000457435 PTPREP23469 700 aa10.23□□□□□ -0.77
LINC01546-201ENST00000457435 FOSBP53539 338 aa10.23□□□□□ -0.77
LINC01546-201ENST00000457435 BCL2L12Q9HB09 334 aa10.23□□□□□ -0.77
LINC01546-201ENST00000457435 PTPN5P54829 565 aa10.21□□□□□ -0.77
LINC01546-201ENST00000457435 ANO8Q9HCE9 1232 aaPredicted RBP10.21□□□□□ -0.77
LINC01546-201ENST00000457435 GOLGA8CPA6NN73 597 aa10.2□□□□□ -0.78
LINC01546-201ENST00000457435 ZDHHC16Q969W1 377 aa10.19□□□□□ -0.78
LINC01546-201ENST00000457435 JPH4Q96JJ6 628 aa10.18□□□□□ -0.78
LINC01546-201ENST00000457435 ADAM33Q9BZ11 813 aa10.17□□□□□ -0.78
LINC01546-201ENST00000457435 SLC4A5Q9BY07 1137 aa10.16□□□□□ -0.78
LINC01546-201ENST00000457435 MFSD10Q14728 455 aa10.15□□□□□ -0.78
LINC01546-201ENST00000457435 MRPL50Q8N5N7 158 aaKnown RBP10.15□□□□□ -0.78
LINC01546-201ENST00000457435 ZBED2Q9BTP6 218 aa10.15□□□□□ -0.78
LINC01546-201ENST00000457435 EMILIN3Q9NT22 766 aa10.14□□□□□ -0.79
LINC01546-201ENST00000457435 CADPS2Q86UW7 1296 aa10.12□□□□□ -0.79
LINC01546-201ENST00000457435 WNT2BQ93097 391 aa10.12□□□□□ -0.79
LINC01546-201ENST00000457435 BHMG1C9JSJ3 638 aaPredicted RBP10.11□□□□□ -0.79
LINC01546-201ENST00000457435 NBPF3Q9H094 633 aa10.1□□□□□ -0.79
LINC01546-201ENST00000457435 THSD4Q6ZMP0 1018 aa10.09□□□□□ -0.79
LINC01546-201ENST00000457435 PCDHGA10Q9Y5H3 936 aa10.09□□□□□ -0.79
LINC01546-201ENST00000457435 TYW1BQ6NUM6 668 aa10.07□□□□□ -0.8
LINC01546-201ENST00000457435 PPP1R3GB7ZBB8 358 aa10.06□□□□□ -0.8
LINC01546-201ENST00000457435 FBXW7Q969H0 707 aa10.06□□□□□ -0.8
LINC01546-201ENST00000457435 PROX2Q3B8N5 592 aa10.05□□□□□ -0.8
LINC01546-201ENST00000457435 PHF14O94880 888 aa10.04□□□□□ -0.8
LINC01546-201ENST00000457435 COL9A1P20849 921 aa10.04□□□□□ -0.8
LINC01546-201ENST00000457435 DPYSL4O14531 572 aa10.03□□□□□ -0.8
LINC01546-201ENST00000457435 RABGEF1Q9UJ41 708 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms