RNA–Protein interactions for RNA: ENST00000457183.6

THBS3-203, Transcript of thrombospondin 3, humanhuman

TSL 2 BASIC

Gene THBS3, Length 2,727 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-203ENST00000457183 TSPOAP1O95153 1857 aa14.09□□□□□ -0.15
THBS3-203ENST00000457183 PLEKHD1A6NEE1 506 aa14.09□□□□□ -0.15
THBS3-203ENST00000457183 CCNB3Q8WWL7 1395 aa14.08□□□□□ -0.15
THBS3-203ENST00000457183 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.08□□□□□ -0.16
THBS3-203ENST00000457183 MYOM3Q5VTT5 1437 aa14.07□□□□□ -0.16
THBS3-203ENST00000457183 KIF14Q15058 1648 aa14.07□□□□□ -0.16
THBS3-203ENST00000457183 WDR7Q9Y4E6 1490 aa14.07□□□□□ -0.16
THBS3-203ENST00000457183 KCNH8Q96L42 1107 aa14.05□□□□□ -0.16
THBS3-203ENST00000457183 TSHZ2Q9NRE2 1034 aa14.05□□□□□ -0.16
THBS3-203ENST00000457183 ITSN2Q9NZM3 1697 aa14.05□□□□□ -0.16
THBS3-203ENST00000457183 FGD6Q6ZV73 1430 aa14.05□□□□□ -0.16
THBS3-203ENST00000457183 MIA2Q96PC5 1412 aa14.05□□□□□ -0.16
THBS3-203ENST00000457183 GLI2P10070 1586 aa14.04□□□□□ -0.16
THBS3-203ENST00000457183 TCOF1Q13428 1488 aaKnown RBP14.01□□□□□ -0.17
THBS3-203ENST00000457183 PTPN23Q9H3S7 1636 aa14.01□□□□□ -0.17
THBS3-203ENST00000457183 MAP3K4Q9Y6R4 1608 aa13.99□□□□□ -0.17
THBS3-203ENST00000457183 CDC42BPAQ5VT25 1732 aa13.99□□□□□ -0.17
THBS3-203ENST00000457183 KDM6BO15054 1643 aa13.99□□□□□ -0.17
THBS3-203ENST00000457183 ANP32EQ9BTT0 268 aa13.99□□□□□ -0.17
THBS3-203ENST00000457183 GPATCH8Q9UKJ3 1502 aaKnown RBP13.98□□□□□ -0.17
THBS3-203ENST00000457183 PPRC1Q5VV67 1664 aaKnown RBP13.98□□□□□ -0.17
THBS3-203ENST00000457183 CD109Q6YHK3 1445 aa13.96□□□□□ -0.18
THBS3-203ENST00000457183 PREX2Q70Z35 1606 aa13.95□□□□□ -0.18
THBS3-203ENST00000457183 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.95□□□□□ -0.18
THBS3-203ENST00000457183 TEX14Q8IWB6 1497 aa13.95□□□□□ -0.18
THBS3-203ENST00000457183 MYO5CQ9NQX4 1742 aa13.95□□□□□ -0.18
THBS3-203ENST00000457183 FAM50AQ14320 339 aaKnown RBP13.94□□□□□ -0.18
THBS3-203ENST00000457183 TTC37Q6PGP7 1564 aa13.93□□□□□ -0.18
THBS3-203ENST00000457183 ITGAEP38570 1179 aa13.93□□□□□ -0.18
THBS3-203ENST00000457183 CDC42BPBQ9Y5S2 1711 aa13.93□□□□□ -0.18
THBS3-203ENST00000457183 ARAP3Q8WWN8 1544 aa13.92□□□□□ -0.18
THBS3-203ENST00000457183 ABCA9Q8IUA7 1624 aa13.92□□□□□ -0.18
THBS3-203ENST00000457183 CFDP1Q9UEE9 299 aaPredicted RBP13.92□□□□□ -0.18
THBS3-203ENST00000457183 BCL11AQ9H165 835 aa13.91□□□□□ -0.18
THBS3-203ENST00000457183 BCANQ96GW7 911 aa13.9□□□□□ -0.18
THBS3-203ENST00000457183 DNMT1P26358 1616 aaKnown RBP13.9□□□□□ -0.18
THBS3-203ENST00000457183 CAMSAP2Q08AD1 1489 aa13.9□□□□□ -0.18
THBS3-203ENST00000457183 RAB3GAP2Q9H2M9 1393 aa13.88□□□□□ -0.19
THBS3-203ENST00000457183 PLCH2O75038 1416 aa13.88□□□□□ -0.19
THBS3-203ENST00000457183 PLEKHH2Q8IVE3 1493 aa13.86□□□□□ -0.19
THBS3-203ENST00000457183 ARHGAP5Q13017 1502 aa13.86□□□□□ -0.19
THBS3-203ENST00000457183 CROCC2H7BZ55 1655 aa13.86□□□□□ -0.19
THBS3-203ENST00000457183 COL17A1Q9UMD9 1497 aaPredicted RBP13.86□□□□□ -0.19
THBS3-203ENST00000457183 ARHGEF5Q12774 1597 aa13.86□□□□□ -0.19
THBS3-203ENST00000457183 DAPK1P53355 1430 aa13.85□□□□□ -0.19
THBS3-203ENST00000457183 AKNAQ7Z591 1439 aa13.85□□□□□ -0.19
THBS3-203ENST00000457183 SAMD9LQ8IVG5 1584 aa13.85□□□□□ -0.19
THBS3-203ENST00000457183 SLC24A1O60721 1099 aa13.84□□□□□ -0.19
THBS3-203ENST00000457183 FKBP8Q14318 412 aa13.84□□□□□ -0.19
THBS3-203ENST00000457183 PTPRKQ15262 1439 aa13.84□□□□□ -0.19
THBS3-203ENST00000457183 DDX10Q13206 875 aaKnown RBP13.84□□□□□ -0.19
THBS3-203ENST00000457183 ABCC5O15440 1437 aa13.83□□□□□ -0.2
THBS3-203ENST00000457183 KIAA1107Q9UPP5 1409 aa13.83□□□□□ -0.2
THBS3-203ENST00000457183 ZNF644Q9H582 1327 aaPredicted RBP13.83□□□□□ -0.2
THBS3-203ENST00000457183 RSPH4AQ5TD94 716 aa13.83□□□□□ -0.2
THBS3-203ENST00000457183 SETD5Q9C0A6 1442 aa13.82□□□□□ -0.2
THBS3-203ENST00000457183 ROCK1Q13464 1354 aa13.82□□□□□ -0.2
THBS3-203ENST00000457183 ADGBQ8N7X0 1667 aa13.82□□□□□ -0.2
THBS3-203ENST00000457183 SHANK2Q9UPX8 1470 aa13.82□□□□□ -0.2
THBS3-203ENST00000457183 HFM1A2PYH4 1435 aa13.82□□□□□ -0.2
THBS3-203ENST00000457183 EFCAB2Q5VUJ9 269 aa13.82□□□□□ -0.2
THBS3-203ENST00000457183 GCC2Q8IWJ2 1684 aa13.81□□□□□ -0.2
THBS3-203ENST00000457183 CFAP74Q9C0B2 1584 aa13.81□□□□□ -0.2
THBS3-203ENST00000457183 ZNF777Q9ULD5 760 aaPredicted RBP13.81□□□□□ -0.2
THBS3-203ENST00000457183 MBD5Q9P267 1494 aa13.8□□□□□ -0.2
THBS3-203ENST00000457183 ADGRL2O95490 1459 aa13.79□□□□□ -0.2
THBS3-203ENST00000457183 NEO1Q92859 1461 aa13.79□□□□□ -0.2
THBS3-203ENST00000457183 ABCC1P33527 1531 aa13.79□□□□□ -0.2
THBS3-203ENST00000457183 SIN3AQ96ST3 1273 aa13.79□□□□□ -0.2
THBS3-203ENST00000457183 CCDC141Q6ZP82 1450 aa13.78□□□□□ -0.2
THBS3-203ENST00000457183 FANCAO15360 1455 aa13.78□□□□□ -0.2
THBS3-203ENST00000457183 PPP1R15AO75807 674 aaPredicted RBP13.78□□□□□ -0.2
THBS3-203ENST00000457183 MAST1Q9Y2H9 1570 aa13.78□□□□□ -0.2
THBS3-203ENST00000457183 SYCP2Q9BX26 1530 aa13.77□□□□□ -0.2
THBS3-203ENST00000457183 AEBP2Q6ZN18 517 aaPredicted RBP13.77□□□□□ -0.21
THBS3-203ENST00000457183 NAIPQ13075 1403 aa13.77□□□□□ -0.21
THBS3-203ENST00000457183 RAPGEF3O95398 923 aa13.76□□□□□ -0.21
THBS3-203ENST00000457183 ERICH6Q7L0X2 663 aa13.75□□□□□ -0.21
THBS3-203ENST00000457183 C9orf84Q5VXU9 1444 aa13.74□□□□□ -0.21
THBS3-203ENST00000457183 NEFLP07196 543 aa13.74□□□□□ -0.21
THBS3-203ENST00000457183 TSPY4P0CV99 314 aa13.74□□□□□ -0.21
THBS3-203ENST00000457183 TSPY10P0CW01 314 aa13.74□□□□□ -0.21
THBS3-203ENST00000457183 ANKRD30AQ9BXX3 1397 aa13.74□□□□□ -0.21
THBS3-203ENST00000457183 NCOA1Q15788 1441 aa13.74□□□□□ -0.21
THBS3-203ENST00000457183 HNRNPMP52272 730 aaKnown RBP eCLIP13.73□□□□□ -0.21
THBS3-203ENST00000457183 RBM19Q9Y4C8 960 aaKnown RBP13.73□□□□□ -0.21
THBS3-203ENST00000457183 TRIM52Q96A61 297 aa13.73□□□□□ -0.21
THBS3-203ENST00000457183 ARHGEF12Q9NZN5 1544 aa13.73□□□□□ -0.21
THBS3-203ENST00000457183 HIRIP3Q9BW71 556 aaPredicted RBP13.72□□□□□ -0.21
THBS3-203ENST00000457183 DENND4BO75064 1496 aaPredicted RBP13.72□□□□□ -0.21
THBS3-203ENST00000457183 CHIC2Q9UKJ5 165 aa13.72□□□□□ -0.21
THBS3-203ENST00000457183 TIMELESSQ9UNS1 1208 aa13.72□□□□□ -0.21
THBS3-203ENST00000457183 PLXNC1O60486 1568 aa13.72□□□□□ -0.21
THBS3-203ENST00000457183 ADGRL1O94910 1474 aa13.71□□□□□ -0.21
THBS3-203ENST00000457183 CCER2I3L3R5 266 aa13.71□□□□□ -0.21
THBS3-203ENST00000457183 FRMPD1Q5SYB0 1578 aa13.7□□□□□ -0.22
THBS3-203ENST00000457183 RTEL1-TNFRSF6BF6WH68 1400 aa13.69□□□□□ -0.22
THBS3-203ENST00000457183 ANP32CO43423 234 aa13.69□□□□□ -0.22
THBS3-203ENST00000457183 RRP7BPQ9NSQ0 103 aa13.69□□□□□ -0.22
THBS3-203ENST00000457183 SCAPERQ9BY12 1400 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms