RNA–Protein interactions for RNA: ENST00000456224.7

SCN11A-203, Transcript of sodium voltage-gated channel alpha subunit 11, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SCN11A, Length 5,262 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11A-203ENST00000456224 MAGI1Q96QZ7 1491 aaPredicted RBP6.67□□□□□ -1.34
SCN11A-203ENST00000456224 NEFMP07197 916 aa6.67□□□□□ -1.34
SCN11A-203ENST00000456224 GOLGA6L2Q8N9W4 650 aaPredicted RBP6.67□□□□□ -1.34
SCN11A-203ENST00000456224 URB2Q14146 1524 aaKnown RBP6.66□□□□□ -1.34
SCN11A-203ENST00000456224 KIAA0586Q9BVV6 1533 aa6.66□□□□□ -1.34
SCN11A-203ENST00000456224 RTL5Q5HYW3 569 aaPredicted RBP6.66□□□□□ -1.34
SCN11A-203ENST00000456224 GRWD1Q9BQ67 446 aaKnown RBP eCLIP6.66□□□□□ -1.34
SCN11A-203ENST00000456224 PTPN23Q9H3S7 1636 aa6.66□□□□□ -1.34
SCN11A-203ENST00000456224 ERICH6BQ5W0A0 696 aa6.66□□□□□ -1.34
SCN11A-203ENST00000456224 HFM1A2PYH4 1435 aa6.66□□□□□ -1.34
SCN11A-203ENST00000456224 CARD11Q9BXL7 1154 aa6.65□□□□□ -1.34
SCN11A-203ENST00000456224 SNAPC4Q5SXM2 1469 aa6.65□□□□□ -1.34
SCN11A-203ENST00000456224 CNGB1Q14028 1251 aaPredicted RBP6.65□□□□□ -1.34
SCN11A-203ENST00000456224 FAM9BQ8IZU0 186 aa6.65□□□□□ -1.35
SCN11A-203ENST00000456224 CNKSR2Q8WXI2 1034 aa6.65□□□□□ -1.35
SCN11A-203ENST00000456224 PLEKHH2Q8IVE3 1493 aa6.65□□□□□ -1.35
SCN11A-203ENST00000456224 PBRM1Q86U86 1689 aa6.65□□□□□ -1.35
SCN11A-203ENST00000456224 ANP32AP39687 249 aaKnown RBP6.64□□□□□ -1.35
SCN11A-203ENST00000456224 WDR43Q15061 677 aaKnown RBP eCLIP6.64□□□□□ -1.35
SCN11A-203ENST00000456224 SYNJ2O15056 1496 aa6.64□□□□□ -1.35
SCN11A-203ENST00000456224 ROCK1Q13464 1354 aa6.64□□□□□ -1.35
SCN11A-203ENST00000456224 EIF3AQ14152 1382 aaKnown RBP6.64□□□□□ -1.35
SCN11A-203ENST00000456224 ITSN2Q9NZM3 1697 aa6.64□□□□□ -1.35
SCN11A-203ENST00000456224 ARID4BQ4LE39 1312 aaPredicted RBP6.64□□□□□ -1.35
SCN11A-203ENST00000456224 HSPA5P11021 654 aaKnown RBP6.64□□□□□ -1.35
SCN11A-203ENST00000456224 CANXP27824 592 aaKnown RBP6.64□□□□□ -1.35
SCN11A-203ENST00000456224 ADAMTS12P58397 1594 aa6.63□□□□□ -1.35
SCN11A-203ENST00000456224 EPRSP07814 1512 aaKnown RBP6.63□□□□□ -1.35
SCN11A-203ENST00000456224 JPH4Q96JJ6 628 aa6.63□□□□□ -1.35
SCN11A-203ENST00000456224 FBXO3Q9UK99 471 aa6.63□□□□□ -1.35
SCN11A-203ENST00000456224 PTPRGP23470 1445 aa6.63□□□□□ -1.35
SCN11A-203ENST00000456224 KDM2AQ9Y2K7 1162 aa6.63□□□□□ -1.35
SCN11A-203ENST00000456224 KIF14Q15058 1648 aa6.63□□□□□ -1.35
SCN11A-203ENST00000456224 ABCA5Q8WWZ7 1642 aa6.62□□□□□ -1.35
SCN11A-203ENST00000456224 ESF1Q9H501 851 aaKnown RBP6.62□□□□□ -1.35
SCN11A-203ENST00000456224 KCNH8Q96L42 1107 aa6.62□□□□□ -1.35
SCN11A-203ENST00000456224 NUP155O75694 1391 aa6.62□□□□□ -1.35
SCN11A-203ENST00000456224 EFCAB2Q5VUJ9 269 aa6.62□□□□□ -1.35
SCN11A-203ENST00000456224 AKNAQ7Z591 1439 aa6.62□□□□□ -1.35
SCN11A-203ENST00000456224 TMF1P82094 1093 aa6.61□□□□□ -1.35
SCN11A-203ENST00000456224 TROQ12816 1431 aaPredicted RBP6.61□□□□□ -1.35
SCN11A-203ENST00000456224 PKD2Q13563 968 aa6.61□□□□□ -1.35
SCN11A-203ENST00000456224 RALBP1Q15311 655 aa6.61□□□□□ -1.35
SCN11A-203ENST00000456224 GRIN2AQ12879 1464 aa6.61□□□□□ -1.35
SCN11A-203ENST00000456224 DAPK1P53355 1430 aa6.6□□□□□ -1.35
SCN11A-203ENST00000456224 RAPGEF6Q8TEU7 1601 aa6.6□□□□□ -1.35
SCN11A-203ENST00000456224 UGGT2Q9NYU1 1516 aa6.6□□□□□ -1.35
SCN11A-203ENST00000456224 KTN1Q86UP2 1357 aaKnown RBP6.6□□□□□ -1.35
SCN11A-203ENST00000456224 STAG3Q9UJ98 1225 aa6.59□□□□□ -1.35
SCN11A-203ENST00000456224 KNSTRNQ9Y448 316 aa6.59□□□□□ -1.35
SCN11A-203ENST00000456224 SAMD9Q5K651 1589 aa6.59□□□□□ -1.35
SCN11A-203ENST00000456224 NBR1Q14596 966 aa6.59□□□□□ -1.35
SCN11A-203ENST00000456224 STAC3Q96MF2 364 aa6.59□□□□□ -1.35
SCN11A-203ENST00000456224 WDR62O43379 1518 aa6.59□□□□□ -1.35
SCN11A-203ENST00000456224 PPP4R2Q9NY27 417 aa6.59□□□□□ -1.36
SCN11A-203ENST00000456224 TCOF1Q13428 1488 aaKnown RBP6.59□□□□□ -1.36
SCN11A-203ENST00000456224 CHGAP10645 457 aaKnown RBP6.58□□□□□ -1.36
SCN11A-203ENST00000456224 SUPT16HQ9Y5B9 1047 aaKnown RBP6.58□□□□□ -1.36
SCN11A-203ENST00000456224 CCDC144AA2RUR9 1427 aa6.58□□□□□ -1.36
SCN11A-203ENST00000456224 KIF15Q9NS87 1388 aa6.58□□□□□ -1.36
SCN11A-203ENST00000456224 ZBTB47Q9UFB7 747 aaPredicted RBP6.58□□□□□ -1.36
SCN11A-203ENST00000456224 CCDC136Q96JN2 1154 aa6.58□□□□□ -1.36
SCN11A-203ENST00000456224 HIRIP3Q9BW71 556 aaPredicted RBP6.58□□□□□ -1.36
SCN11A-203ENST00000456224 DCAF11Q8TEB1 546 aa6.57□□□□□ -1.36
SCN11A-203ENST00000456224 ARHGAP5Q13017 1502 aa6.57□□□□□ -1.36
SCN11A-203ENST00000456224 KIAA0556O60303 1618 aa6.57□□□□□ -1.36
SCN11A-203ENST00000456224 CFAP53Q96M91 514 aa6.57□□□□□ -1.36
SCN11A-203ENST00000456224 CNTLNQ9NXG0 1405 aa6.57□□□□□ -1.36
SCN11A-203ENST00000456224 PLEKHG5O94827 1062 aa6.57□□□□□ -1.36
SCN11A-203ENST00000456224 CAMSAP2Q08AD1 1489 aa6.56□□□□□ -1.36
SCN11A-203ENST00000456224 L3MBTL2Q969R5 705 aa6.56□□□□□ -1.36
SCN11A-203ENST00000456224 ANKRD50Q9ULJ7 1429 aa6.56□□□□□ -1.36
SCN11A-203ENST00000456224 PRG4Q92954 1404 aaPredicted RBP6.55□□□□□ -1.36
SCN11A-203ENST00000456224 CDK13Q14004 1512 aaKnown RBP6.55□□□□□ -1.36
SCN11A-203ENST00000456224 KIAA1107Q9UPP5 1409 aa6.55□□□□□ -1.36
SCN11A-203ENST00000456224 EIF5BO60841 1220 aaKnown RBP6.55□□□□□ -1.36
SCN11A-203ENST00000456224 KLHL34Q8N239 644 aa6.55□□□□□ -1.36
SCN11A-203ENST00000456224 DDRGK1Q96HY6 314 aa6.55□□□□□ -1.36
SCN11A-203ENST00000456224 PNNQ9H307 717 aaKnown RBP6.55□□□□□ -1.36
SCN11A-203ENST00000456224 NAIPQ13075 1403 aa6.55□□□□□ -1.36
SCN11A-203ENST00000456224 C9orf84Q5VXU9 1444 aa6.55□□□□□ -1.36
SCN11A-203ENST00000456224 FOXD1Q16676 465 aa6.54□□□□□ -1.36
SCN11A-203ENST00000456224 SPAG9O60271 1321 aaKnown RBP6.54□□□□□ -1.36
SCN11A-203ENST00000456224 RGL3Q3MIN7 710 aa6.54□□□□□ -1.36
SCN11A-203ENST00000456224 HNRNPMP52272 730 aaKnown RBP eCLIP6.54□□□□□ -1.36
SCN11A-203ENST00000456224 UPF2Q9HAU5 1272 aaKnown RBP6.54□□□□□ -1.36
SCN11A-203ENST00000456224 USP47Q96K76 1375 aa6.53□□□□□ -1.36
SCN11A-203ENST00000456224 GCC2Q8IWJ2 1684 aa6.53□□□□□ -1.36
SCN11A-203ENST00000456224 NPM3O75607 178 aaKnown RBP6.53□□□□□ -1.36
SCN11A-203ENST00000456224 ADGBQ8N7X0 1667 aa6.53□□□□□ -1.36
SCN11A-203ENST00000456224 EIF4G3O43432 1585 aaKnown RBP6.53□□□□□ -1.36
SCN11A-203ENST00000456224 CCDC141Q6ZP82 1450 aa6.52□□□□□ -1.36
SCN11A-203ENST00000456224 HDGFP51858 240 aaKnown RBP6.52□□□□□ -1.37
SCN11A-203ENST00000456224 PDE3BQ13370 1112 aa6.52□□□□□ -1.37
SCN11A-203ENST00000456224 TARBP1Q13395 1621 aaKnown RBP6.52□□□□□ -1.37
SCN11A-203ENST00000456224 MYBBP1AQ9BQG0 1328 aaKnown RBP6.52□□□□□ -1.37
SCN11A-203ENST00000456224 CCDC7Q96M83 1385 aa6.52□□□□□ -1.37
SCN11A-203ENST00000456224 DCAF8L1A6NGE4 600 aa6.52□□□□□ -1.37
SCN11A-203ENST00000456224 TULP1O00294 542 aaPredicted RBP6.52□□□□□ -1.37
SCN11A-203ENST00000456224 MS4A1P11836 297 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms