RNA–Protein interactions for RNA: ENST00000455853.1

LINC00473-202, long intergenic non-protein coding RNA 473, humanhuman

TSL 1 (best)

Gene LINC00473, Length 1,822 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00473-202ENST00000455853 UGGT2Q9NYU1 1516 aa17.97■□□□□ 0.47
LINC00473-202ENST00000455853 NAIPQ13075 1403 aa17.97■□□□□ 0.47
LINC00473-202ENST00000455853 AKNAQ7Z591 1439 aa17.97■□□□□ 0.47
LINC00473-202ENST00000455853 NCOA2Q15596 1464 aa17.96■□□□□ 0.47
LINC00473-202ENST00000455853 POTEDQ86YR6 584 aa17.94■□□□□ 0.46
LINC00473-202ENST00000455853 TCOF1Q13428 1488 aaKnown RBP17.93■□□□□ 0.46
LINC00473-202ENST00000455853 ERICH6BQ5W0A0 696 aa17.92■□□□□ 0.46
LINC00473-202ENST00000455853 KDM5BQ9UGL1 1544 aa17.91■□□□□ 0.46
LINC00473-202ENST00000455853 PTPRKQ15262 1439 aa17.9■□□□□ 0.46
LINC00473-202ENST00000455853 BCANQ96GW7 911 aa17.9■□□□□ 0.46
LINC00473-202ENST00000455853 KIAA0556O60303 1618 aa17.9■□□□□ 0.46
LINC00473-202ENST00000455853 FAM69CQ0P6D2 419 aa17.87■□□□□ 0.45
LINC00473-202ENST00000455853 ABCC10Q5T3U5 1492 aa17.85■□□□□ 0.45
LINC00473-202ENST00000455853 ABCC2Q92887 1545 aa17.85■□□□□ 0.45
LINC00473-202ENST00000455853 TRIM52Q96A61 297 aa17.85■□□□□ 0.45
LINC00473-202ENST00000455853 RBM19Q9Y4C8 960 aaKnown RBP17.85■□□□□ 0.45
LINC00473-202ENST00000455853 UHRF1BP1LA0JNW5 1464 aa17.84■□□□□ 0.45
LINC00473-202ENST00000455853 MIA2Q96PC5 1412 aa17.83■□□□□ 0.45
LINC00473-202ENST00000455853 POLR1AO95602 1720 aaPredicted RBP17.82■□□□□ 0.44
LINC00473-202ENST00000455853 KIF13AQ9H1H9 1805 aa17.81■□□□□ 0.44
LINC00473-202ENST00000455853 HIRIP3Q9BW71 556 aaPredicted RBP17.81■□□□□ 0.44
LINC00473-202ENST00000455853 DIP2BQ9P265 1576 aa17.8■□□□□ 0.44
LINC00473-202ENST00000455853 PLB1Q6P1J6 1458 aa17.8■□□□□ 0.44
LINC00473-202ENST00000455853 CNTLNQ9NXG0 1405 aa17.79■□□□□ 0.44
LINC00473-202ENST00000455853 ASXL2Q76L83 1435 aa17.78■□□□□ 0.44
LINC00473-202ENST00000455853 EIF4G2P78344 907 aaKnown RBP eCLIP17.77■□□□□ 0.43
LINC00473-202ENST00000455853 FANCIQ9NVI1 1328 aa17.76■□□□□ 0.43
LINC00473-202ENST00000455853 MAGI3Q5TCQ9 1506 aa17.75■□□□□ 0.43
LINC00473-202ENST00000455853 HNRNPUQ00839 825 aaKnown RBP eCLIP17.75■□□□□ 0.43
LINC00473-202ENST00000455853 CDK11AQ9UQ88 783 aaPredicted RBP17.75■□□□□ 0.43
LINC00473-202ENST00000455853 HSPA5P11021 654 aaKnown RBP17.74■□□□□ 0.43
LINC00473-202ENST00000455853 ROCK1Q13464 1354 aa17.73■□□□□ 0.43
LINC00473-202ENST00000455853 WASHC2AQ641Q2 1341 aa17.73■□□□□ 0.43
LINC00473-202ENST00000455853 ABCA8O94911 1581 aa17.72■□□□□ 0.43
LINC00473-202ENST00000455853 NCOA1Q15788 1441 aa17.72■□□□□ 0.43
LINC00473-202ENST00000455853 DENND4BO75064 1496 aaPredicted RBP17.72■□□□□ 0.43
LINC00473-202ENST00000455853 EPRSP07814 1512 aaKnown RBP17.72■□□□□ 0.43
LINC00473-202ENST00000455853 ZCCHC11Q5TAX3 1644 aaKnown RBP17.71■□□□□ 0.42
LINC00473-202ENST00000455853 ARID3CA6NKF2 412 aa17.7■□□□□ 0.42
LINC00473-202ENST00000455853 PPP4R2Q9NY27 417 aa17.68■□□□□ 0.42
LINC00473-202ENST00000455853 RPRD2Q5VT52 1461 aaKnown RBP17.68■□□□□ 0.42
LINC00473-202ENST00000455853 DNMT1P26358 1616 aaKnown RBP17.67■□□□□ 0.42
LINC00473-202ENST00000455853 CCDC7Q96M83 1385 aa17.67■□□□□ 0.42
LINC00473-202ENST00000455853 KDM6BO15054 1643 aa17.66■□□□□ 0.42
LINC00473-202ENST00000455853 MPHOSPH9Q99550 1183 aa17.66■□□□□ 0.42
LINC00473-202ENST00000455853 RRP7BPQ9NSQ0 103 aa17.65■□□□□ 0.42
LINC00473-202ENST00000455853 MYT1LQ9UL68 1186 aa17.65■□□□□ 0.42
LINC00473-202ENST00000455853 ZBED9Q6R2W3 1325 aa17.65■□□□□ 0.42
LINC00473-202ENST00000455853 GLI2P10070 1586 aa17.65■□□□□ 0.42
LINC00473-202ENST00000455853 WDR7Q9Y4E6 1490 aa17.63■□□□□ 0.41
LINC00473-202ENST00000455853 TEX14Q8IWB6 1497 aa17.62■□□□□ 0.41
LINC00473-202ENST00000455853 ANKRD30BQ9BXX2 1392 aa17.62■□□□□ 0.41
LINC00473-202ENST00000455853 PRKRIP1Q9H875 184 aaPredicted RBP17.62■□□□□ 0.41
LINC00473-202ENST00000455853 ATP10BO94823 1461 aa17.62■□□□□ 0.41
LINC00473-202ENST00000455853 TSPOAP1O95153 1857 aa17.62■□□□□ 0.41
LINC00473-202ENST00000455853 DAPK1P53355 1430 aa17.62■□□□□ 0.41
LINC00473-202ENST00000455853 L3MBTL2Q969R5 705 aa17.6■□□□□ 0.41
LINC00473-202ENST00000455853 ADGBQ8N7X0 1667 aa17.59■□□□□ 0.41
LINC00473-202ENST00000455853 SPATA31E1Q6ZUB1 1445 aa17.58■□□□□ 0.41
LINC00473-202ENST00000455853 ERICH6Q7L0X2 663 aa17.58■□□□□ 0.4
LINC00473-202ENST00000455853 CHIC2Q9UKJ5 165 aa17.58■□□□□ 0.4
LINC00473-202ENST00000455853 CDK13Q14004 1512 aaKnown RBP17.58■□□□□ 0.4
LINC00473-202ENST00000455853 RAPGEF6Q8TEU7 1601 aa17.57■□□□□ 0.4
LINC00473-202ENST00000455853 PPRC1Q5VV67 1664 aaKnown RBP17.57■□□□□ 0.4
LINC00473-202ENST00000455853 ITSN2Q9NZM3 1697 aa17.57■□□□□ 0.4
LINC00473-202ENST00000455853 NUP153P49790 1475 aaKnown RBP17.56■□□□□ 0.4
LINC00473-202ENST00000455853 ARID4BQ4LE39 1312 aaPredicted RBP17.55■□□□□ 0.4
LINC00473-202ENST00000455853 MAP3K4Q9Y6R4 1608 aa17.55■□□□□ 0.4
LINC00473-202ENST00000455853 MRS2Q9HD23 443 aa17.54■□□□□ 0.4
LINC00473-202ENST00000455853 BCL11AQ9H165 835 aa17.54■□□□□ 0.4
LINC00473-202ENST00000455853 ABCC5O15440 1437 aa17.53■□□□□ 0.4
LINC00473-202ENST00000455853 MSH5O43196 834 aa17.53■□□□□ 0.4
LINC00473-202ENST00000455853 CD109Q6YHK3 1445 aa17.52■□□□□ 0.39
LINC00473-202ENST00000455853 SMG6Q86US8 1419 aaKnown RBP17.52■□□□□ 0.39
LINC00473-202ENST00000455853 KIF14Q15058 1648 aa17.51■□□□□ 0.39
LINC00473-202ENST00000455853 COL17A1Q9UMD9 1497 aaPredicted RBP17.51■□□□□ 0.39
LINC00473-202ENST00000455853 MBD5Q9P267 1494 aa17.5■□□□□ 0.39
LINC00473-202ENST00000455853 CROCC2H7BZ55 1655 aa17.5■□□□□ 0.39
LINC00473-202ENST00000455853 KIF7Q2M1P5 1343 aa17.49■□□□□ 0.39
LINC00473-202ENST00000455853 ADGRL2O95490 1459 aa17.49■□□□□ 0.39
LINC00473-202ENST00000455853 IRX6P78412 446 aaPredicted RBP17.47■□□□□ 0.39
LINC00473-202ENST00000455853 ROCK2O75116 1388 aaKnown RBP17.47■□□□□ 0.39
LINC00473-202ENST00000455853 C11orf95C9JLR9 678 aaPredicted RBP17.47■□□□□ 0.39
LINC00473-202ENST00000455853 NBPF8Q3BBV2 869 aa17.47■□□□□ 0.39
LINC00473-202ENST00000455853 FAM9BQ8IZU0 186 aa17.47■□□□□ 0.39
LINC00473-202ENST00000455853 PZPP20742 1482 aa17.46■□□□□ 0.39
LINC00473-202ENST00000455853 SLC4A1APQ9BWU0 796 aaKnown RBP17.46■□□□□ 0.39
LINC00473-202ENST00000455853 CCDC184Q52MB2 194 aa17.45■□□□□ 0.38
LINC00473-202ENST00000455853 KIAA1107Q9UPP5 1409 aa17.45■□□□□ 0.38
LINC00473-202ENST00000455853 PLEKHD1A6NEE1 506 aa17.44■□□□□ 0.38
LINC00473-202ENST00000455853 TROQ12816 1431 aaPredicted RBP17.43■□□□□ 0.38
LINC00473-202ENST00000455853 RNF123Q5XPI4 1314 aa17.43■□□□□ 0.38
LINC00473-202ENST00000455853 KDM5CP41229 1560 aa17.42■□□□□ 0.38
LINC00473-202ENST00000455853 CAMSAP2Q08AD1 1489 aa17.42■□□□□ 0.38
LINC00473-202ENST00000455853 DHX29Q7Z478 1369 aaKnown RBP17.42■□□□□ 0.38
LINC00473-202ENST00000455853 KTN1Q86UP2 1357 aaKnown RBP17.42■□□□□ 0.38
LINC00473-202ENST00000455853 UHRF1BP1Q6BDS2 1440 aa17.42■□□□□ 0.38
LINC00473-202ENST00000455853 ARHGEF12Q9NZN5 1544 aa17.41■□□□□ 0.38
LINC00473-202ENST00000455853 NUDCQ9Y266 331 aa17.4■□□□□ 0.38
LINC00473-202ENST00000455853 ABCA9Q8IUA7 1624 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms