RNA–Protein interactions for RNA: ENST00000455383.5

MSH6-206, Transcript of mutS homolog 6, humanhuman

TSL 5

Gene MSH6, Length 578 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-206ENST00000455383 UBTFP17480 764 aaKnown RBP31.06■■■□□ 2.56
MSH6-206ENST00000455383 EFCAB2Q5VUJ9 269 aa31.02■■■□□ 2.56
MSH6-206ENST00000455383 CDK11AQ9UQ88 783 aaPredicted RBP31.01■■■□□ 2.55
MSH6-206ENST00000455383 MYO5CQ9NQX4 1742 aa31.01■■■□□ 2.55
MSH6-206ENST00000455383 ATP10AO60312 1499 aa31■■■□□ 2.55
MSH6-206ENST00000455383 ATP1B4Q9UN42 357 aaPredicted RBP30.98■■■□□ 2.55
MSH6-206ENST00000455383 EHMT2Q96KQ7 1210 aa30.97■■■□□ 2.55
MSH6-206ENST00000455383 KIF14Q15058 1648 aa30.97■■■□□ 2.55
MSH6-206ENST00000455383 TROQ12816 1431 aaPredicted RBP30.97■■■□□ 2.55
MSH6-206ENST00000455383 HSPA2P54652 639 aa30.96■■■□□ 2.55
MSH6-206ENST00000455383 ARHGEF12Q9NZN5 1544 aa30.96■■■□□ 2.55
MSH6-206ENST00000455383 C9orf84Q5VXU9 1444 aa30.96■■■□□ 2.55
MSH6-206ENST00000455383 FER1L4A9Z1Z3 1794 aa30.95■■■□□ 2.55
MSH6-206ENST00000455383 MLECQ14165 292 aa30.95■■■□□ 2.55
MSH6-206ENST00000455383 CHIC1Q5VXU3 224 aa30.92■■■□□ 2.54
MSH6-206ENST00000455383 PLPPR3Q6T4P5 718 aa30.91■■■□□ 2.54
MSH6-206ENST00000455383 ZNF518AQ6AHZ1 1483 aa30.9■■■□□ 2.54
MSH6-206ENST00000455383 KDM5CP41229 1560 aa30.9■■■□□ 2.54
MSH6-206ENST00000455383 LRRIQ1Q96JM4 1722 aa30.88■■■□□ 2.53
MSH6-206ENST00000455383 CLIP1P30622 1438 aa30.88■■■□□ 2.53
MSH6-206ENST00000455383 ARHGAP5Q13017 1502 aa30.87■■■□□ 2.53
MSH6-206ENST00000455383 AFAP1Q8N556 730 aa30.85■■■□□ 2.53
MSH6-206ENST00000455383 REREQ9P2R6 1566 aa30.79■■■□□ 2.52
MSH6-206ENST00000455383 CDC42BPBQ9Y5S2 1711 aa30.79■■■□□ 2.52
MSH6-206ENST00000455383 DIP2CQ9Y2E4 1556 aa30.79■■■□□ 2.52
MSH6-206ENST00000455383 MLH3Q9UHC1 1453 aa30.78■■■□□ 2.52
MSH6-206ENST00000455383 CASKIN1Q8WXD9 1431 aa30.77■■■□□ 2.52
MSH6-206ENST00000455383 PREX1Q8TCU6 1659 aa30.77■■■□□ 2.52
MSH6-206ENST00000455383 CEBPAP49715 358 aaPredicted RBP30.76■■■□□ 2.51
MSH6-206ENST00000455383 CCDC18Q5T9S5 1454 aa30.75■■■□□ 2.51
MSH6-206ENST00000455383 PREX2Q70Z35 1606 aa30.74■■■□□ 2.51
MSH6-206ENST00000455383 ABCC1P33527 1531 aa30.73■■■□□ 2.51
MSH6-206ENST00000455383 CERKQ8TCT0 537 aa30.72■■■□□ 2.51
MSH6-206ENST00000455383 ABCA6Q8N139 1617 aa30.72■■■□□ 2.51
MSH6-206ENST00000455383 TRAPPC8Q9Y2L5 1435 aa30.71■■■□□ 2.51
MSH6-206ENST00000455383 AGLP35573 1532 aa30.7■■■□□ 2.51
MSH6-206ENST00000455383 ITSN2Q9NZM3 1697 aa30.66■■■□□ 2.5
MSH6-206ENST00000455383 MYT1LQ9UL68 1186 aa30.66■■■□□ 2.5
MSH6-206ENST00000455383 SETD1BQ9UPS6 1966 aaKnown RBP30.65■■■□□ 2.5
MSH6-206ENST00000455383 UHRF1BP1Q6BDS2 1440 aa30.64■■■□□ 2.49
MSH6-206ENST00000455383 STRCQ7RTU9 1775 aa30.63■■■□□ 2.49
MSH6-206ENST00000455383 FYCO1Q9BQS8 1478 aa30.62■■■□□ 2.49
MSH6-206ENST00000455383 CDC42BPAQ5VT25 1732 aa30.61■■■□□ 2.49
MSH6-206ENST00000455383 KIDINS220Q9ULH0 1771 aa30.61■■■□□ 2.49
MSH6-206ENST00000455383 C3P01024 1663 aa30.59■■■□□ 2.49
MSH6-206ENST00000455383 DMRT2Q9Y5R5 561 aa30.59■■■□□ 2.49
MSH6-206ENST00000455383 SAMD9LQ8IVG5 1584 aa30.54■■■□□ 2.48
MSH6-206ENST00000455383 GPATCH8Q9UKJ3 1502 aaKnown RBP30.52■■■□□ 2.48
MSH6-206ENST00000455383 CNTLNQ9NXG0 1405 aa30.52■■■□□ 2.48
MSH6-206ENST00000455383 PTPRTO14522 1441 aa30.49■■■□□ 2.47
MSH6-206ENST00000455383 ESF1Q9H501 851 aaKnown RBP30.49■■■□□ 2.47
MSH6-206ENST00000455383 SYCP2Q9BX26 1530 aa30.47■■■□□ 2.47
MSH6-206ENST00000455383 ZNF777Q9ULD5 760 aaPredicted RBP30.45■■■□□ 2.47
MSH6-206ENST00000455383 KIAA1107Q9UPP5 1409 aa30.45■■■□□ 2.46
MSH6-206ENST00000455383 SPAG9O60271 1321 aaKnown RBP30.43■■■□□ 2.46
MSH6-206ENST00000455383 HNRNPMP52272 730 aaKnown RBP eCLIP30.42■■■□□ 2.46
MSH6-206ENST00000455383 MROH2AA6NES4 1674 aa30.42■■■□□ 2.46
MSH6-206ENST00000455383 NPATQ14207 1427 aa30.41■■■□□ 2.46
MSH6-206ENST00000455383 PLEKHH2Q8IVE3 1493 aa30.4■■■□□ 2.46
MSH6-206ENST00000455383 NCOA1Q15788 1441 aa30.39■■■□□ 2.46
MSH6-206ENST00000455383 ZMYM3Q14202 1370 aa30.38■■■□□ 2.45
MSH6-206ENST00000455383 ATP7AQ04656 1500 aa30.37■■■□□ 2.45
MSH6-206ENST00000455383 PLXNC1O60486 1568 aa30.37■■■□□ 2.45
MSH6-206ENST00000455383 INO80Q9ULG1 1556 aaPredicted RBP30.37■■■□□ 2.45
MSH6-206ENST00000455383 CFDP1Q9UEE9 299 aaPredicted RBP30.37■■■□□ 2.45
MSH6-206ENST00000455383 CCNB3Q8WWL7 1395 aa30.35■■■□□ 2.45
MSH6-206ENST00000455383 LTBP4Q8N2S1 1624 aa30.34■■■□□ 2.45
MSH6-206ENST00000455383 SUPT6HQ7KZ85 1726 aaKnown RBP30.33■■■□□ 2.45
MSH6-206ENST00000455383 A2MP01023 1474 aa30.33■■■□□ 2.45
MSH6-206ENST00000455383 MTUS2Q5JR59 1369 aa30.29■■■□□ 2.44
MSH6-206ENST00000455383 CAMSAP1Q5T5Y3 1602 aa30.29■■■□□ 2.44
MSH6-206ENST00000455383 IQSEC2Q5JU85 1478 aa30.26■■■□□ 2.44
MSH6-206ENST00000455383 CLTCQ00610 1675 aaKnown RBP30.26■■■□□ 2.43
MSH6-206ENST00000455383 PTPRKQ15262 1439 aa30.24■■■□□ 2.43
MSH6-206ENST00000455383 MBD5Q9P267 1494 aa30.24■■■□□ 2.43
MSH6-206ENST00000455383 TIAM1Q13009 1591 aa30.24■■■□□ 2.43
MSH6-206ENST00000455383 PPP6R1Q9UPN7 881 aa30.23■■■□□ 2.43
MSH6-206ENST00000455383 ZNF644Q9H582 1327 aaPredicted RBP30.22■■■□□ 2.43
MSH6-206ENST00000455383 ZNF142P52746 1687 aaPredicted RBP30.21■■■□□ 2.43
MSH6-206ENST00000455383 ADGBQ8N7X0 1667 aa30.21■■■□□ 2.43
MSH6-206ENST00000455383 EHBP1L1Q8N3D4 1523 aa30.21■■■□□ 2.43
MSH6-206ENST00000455383 MYO3AQ8NEV4 1616 aa30.2■■■□□ 2.43
MSH6-206ENST00000455383 GGT6Q6P531 493 aa30.19■■■□□ 2.42
MSH6-206ENST00000455383 RTEL1-TNFRSF6BF6WH68 1400 aa30.19■■■□□ 2.42
MSH6-206ENST00000455383 PLA2R1Q13018 1463 aa30.19■■■□□ 2.42
MSH6-206ENST00000455383 CEP162Q5TB80 1403 aa30.18■■■□□ 2.42
MSH6-206ENST00000455383 NCKAP5LQ9HCH0 1330 aa30.18■■■□□ 2.42
MSH6-206ENST00000455383 CEP170BQ9Y4F5 1589 aaPredicted RBP30.15■■■□□ 2.42
MSH6-206ENST00000455383 TCOF1Q13428 1488 aaKnown RBP30.15■■■□□ 2.42
MSH6-206ENST00000455383 PKD2Q13563 968 aa30.14■■■□□ 2.42
MSH6-206ENST00000455383 DISP3Q9P2K9 1392 aa30.13■■■□□ 2.41
MSH6-206ENST00000455383 DHX29Q7Z478 1369 aaKnown RBP30.12■■■□□ 2.41
MSH6-206ENST00000455383 ZNF335Q9H4Z2 1342 aaPredicted RBP30.09■■■□□ 2.41
MSH6-206ENST00000455383 ILDR2Q71H61 639 aa30.08■■■□□ 2.41
MSH6-206ENST00000455383 A2ML1A8K2U0 1454 aa30.05■■■□□ 2.4
MSH6-206ENST00000455383 CCDC141Q6ZP82 1450 aa30.04■■■□□ 2.4
MSH6-206ENST00000455383 NCOA2Q15596 1464 aa30.03■■■□□ 2.4
MSH6-206ENST00000455383 FAM135AQ9P2D6 1515 aa30.01■■■□□ 2.4
MSH6-206ENST00000455383 DNMT1P26358 1616 aaKnown RBP30.01■■■□□ 2.39
MSH6-206ENST00000455383 RSPH4AQ5TD94 716 aa30.01■■■□□ 2.39
Retrieved 100 of 20,778 RNA–protein pairs in 106.4 ms