RNA–Protein interactions for RNA: ENST00000455163.1

LINC02249-201, Transcript of long intergenic non-protein coding RNA 2249, humanhuman

Gene LINC02249, Length 399 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02249-201ENST00000455163 PEG3Q9GZU2 1588 aa7.67□□□□□ -1.18
LINC02249-201ENST00000455163 VARS2Q5ST30 1063 aaKnown RBP7.67□□□□□ -1.18
LINC02249-201ENST00000455163 PSEN1P49768 467 aa7.66□□□□□ -1.18
LINC02249-201ENST00000455163 ZNF710Q8N1W2 664 aa7.66□□□□□ -1.18
LINC02249-201ENST00000455163 THOC2Q8NI27 1593 aaKnown RBP7.65□□□□□ -1.18
LINC02249-201ENST00000455163 BOLA1Q9Y3E2 137 aa7.65□□□□□ -1.18
LINC02249-201ENST00000455163 KIF21AQ7Z4S6 1674 aa7.64□□□□□ -1.19
LINC02249-201ENST00000455163 ZNF687Q8N1G0 1237 aa7.64□□□□□ -1.19
LINC02249-201ENST00000455163 CHRM1P11229 460 aaPredicted RBP7.63□□□□□ -1.19
LINC02249-201ENST00000455163 DOK7Q18PE1 504 aa7.63□□□□□ -1.19
LINC02249-201ENST00000455163 WIZO95785 1651 aa7.61□□□□□ -1.19
LINC02249-201ENST00000455163 LAMC3Q9Y6N6 1575 aa7.61□□□□□ -1.19
LINC02249-201ENST00000455163 TMEM92Q6UXU6 159 aa7.59□□□□□ -1.19
LINC02249-201ENST00000455163 GPR153Q6NV75 609 aa7.58□□□□□ -1.2
LINC02249-201ENST00000455163 GSE1Q14687 1217 aa7.57□□□□□ -1.2
LINC02249-201ENST00000455163 CABP2Q9NPB3 220 aa7.57□□□□□ -1.2
LINC02249-201ENST00000455163 PTGER2P43116 358 aa7.56□□□□□ -1.2
LINC02249-201ENST00000455163 PDAP1Q13442 181 aaKnown RBP7.56□□□□□ -1.2
LINC02249-201ENST00000455163 G3V3G9 751 aa7.55□□□□□ -1.2
LINC02249-201ENST00000455163 RIMBP2O15034 1052 aa7.54□□□□□ -1.2
LINC02249-201ENST00000455163 ANKRD13DQ6ZTN6 518 aa7.54□□□□□ -1.2
LINC02249-201ENST00000455163 ZSWIM6Q9HCJ5 1215 aa7.54□□□□□ -1.2
LINC02249-201ENST00000455163 PDS5BQ9NTI5 1447 aa7.53□□□□□ -1.2
LINC02249-201ENST00000455163 CADPSQ9ULU8 1353 aa7.53□□□□□ -1.2
LINC02249-201ENST00000455163 MRC2Q9UBG0 1479 aa7.5□□□□□ -1.21
LINC02249-201ENST00000455163 PLA2G2EQ9NZK7 142 aa7.5□□□□□ -1.21
LINC02249-201ENST00000455163 WDR62O43379 1518 aa7.5□□□□□ -1.21
LINC02249-201ENST00000455163 RSF1Q96T23 1441 aaPredicted RBP7.49□□□□□ -1.21
LINC02249-201ENST00000455163 LSM11P83369 360 aaKnown RBP eCLIP7.48□□□□□ -1.21
LINC02249-201ENST00000455163 FKBP8Q14318 412 aa7.48□□□□□ -1.21
LINC02249-201ENST00000455163 ARSIQ5FYB1 569 aa7.48□□□□□ -1.21
LINC02249-201ENST00000455163 MICALL2Q8IY33 904 aa7.47□□□□□ -1.21
LINC02249-201ENST00000455163 KHSRPQ92945 711 aaKnown RBP eCLIP7.47□□□□□ -1.21
LINC02249-201ENST00000455163 FANCD2Q9BXW9 1451 aa7.47□□□□□ -1.21
LINC02249-201ENST00000455163 CEP164Q9UPV0 1460 aa7.47□□□□□ -1.21
LINC02249-201ENST00000455163 TOP2AP11388 1531 aaKnown RBP7.47□□□□□ -1.21
LINC02249-201ENST00000455163 POTEEQ6S8J3 1075 aa7.46□□□□□ -1.22
LINC02249-201ENST00000455163 CFTRP13569 1480 aa7.45□□□□□ -1.22
LINC02249-201ENST00000455163 ZNF316A6NFI3 1004 aaPredicted RBP7.45□□□□□ -1.22
LINC02249-201ENST00000455163 KLHL34Q8N239 644 aa7.45□□□□□ -1.22
LINC02249-201ENST00000455163 EFCAB3Q8N7B9 438 aa7.45□□□□□ -1.22
LINC02249-201ENST00000455163 URB2Q14146 1524 aaKnown RBP7.44□□□□□ -1.22
LINC02249-201ENST00000455163 PRDM2Q13029 1718 aa7.43□□□□□ -1.22
LINC02249-201ENST00000455163 FBXO3Q9UK99 471 aa7.41□□□□□ -1.22
LINC02249-201ENST00000455163 VASPP50552 380 aaPredicted RBP7.4□□□□□ -1.22
LINC02249-201ENST00000455163 TRIM41Q8WV44 630 aa7.4□□□□□ -1.22
LINC02249-201ENST00000455163 MS4A4AQ96JQ5 239 aa7.4□□□□□ -1.22
LINC02249-201ENST00000455163 CCDC88BA6NC98 1476 aa7.39□□□□□ -1.23
LINC02249-201ENST00000455163 HCSTQ9UBK5 93 aa7.39□□□□□ -1.23
LINC02249-201ENST00000455163 AXIN2Q9Y2T1 843 aa7.38□□□□□ -1.23
LINC02249-201ENST00000455163 ZNF608Q9ULD9 1512 aaPredicted RBP7.36□□□□□ -1.23
LINC02249-201ENST00000455163 PBX2P40425 430 aa7.35□□□□□ -1.23
LINC02249-201ENST00000455163 TOPBP1Q92547 1522 aa7.33□□□□□ -1.24
LINC02249-201ENST00000455163 CIZ1Q9ULV3 898 aaPredicted RBP7.33□□□□□ -1.24
LINC02249-201ENST00000455163 NUDT7P0C024 238 aa7.32□□□□□ -1.24
LINC02249-201ENST00000455163 IFT140Q96RY7 1462 aa7.31□□□□□ -1.24
LINC02249-201ENST00000455163 RIMBP3CA6NJZ7 1639 aa7.31□□□□□ -1.24
LINC02249-201ENST00000455163 RIMBP3BA6NNM3 1639 aa7.31□□□□□ -1.24
LINC02249-201ENST00000455163 RIMBP3Q9UFD9 1639 aa7.31□□□□□ -1.24
LINC02249-201ENST00000455163 EIF4G3O43432 1585 aaKnown RBP7.31□□□□□ -1.24
LINC02249-201ENST00000455163 LHX6Q9UPM6 363 aa7.31□□□□□ -1.24
LINC02249-201ENST00000455163 PHF8Q9UPP1 1060 aa7.31□□□□□ -1.24
LINC02249-201ENST00000455163 SOX12O15370 315 aa7.3□□□□□ -1.24
LINC02249-201ENST00000455163 ADGRD1Q6QNK2 874 aa7.3□□□□□ -1.24
LINC02249-201ENST00000455163 TARBP1Q13395 1621 aaKnown RBP7.3□□□□□ -1.24
LINC02249-201ENST00000455163 DNMBPQ6XZF7 1577 aa7.29□□□□□ -1.24
LINC02249-201ENST00000455163 CHD1O14646 1710 aa7.29□□□□□ -1.24
LINC02249-201ENST00000455163 HRO43593 1189 aa7.28□□□□□ -1.24
LINC02249-201ENST00000455163 IFNLR1Q8IU57 520 aaPredicted RBP7.28□□□□□ -1.24
LINC02249-201ENST00000455163 SPOCK2Q92563 424 aa7.28□□□□□ -1.24
LINC02249-201ENST00000455163 KIF3CO14782 793 aa7.27□□□□□ -1.25
LINC02249-201ENST00000455163 AQRO60306 1485 aaKnown RBP eCLIP7.27□□□□□ -1.25
LINC02249-201ENST00000455163 ARHGEF11O15085 1522 aa7.27□□□□□ -1.25
LINC02249-201ENST00000455163 POLA1P09884 1462 aaPredicted RBP7.26□□□□□ -1.25
LINC02249-201ENST00000455163 ABCC8Q09428 1581 aa7.25□□□□□ -1.25
LINC02249-201ENST00000455163 RAD54L2Q9Y4B4 1467 aa7.25□□□□□ -1.25
LINC02249-201ENST00000455163 ARHGAP33O14559 1287 aa7.24□□□□□ -1.25
LINC02249-201ENST00000455163 PCDHGA4Q9Y5G9 962 aa7.24□□□□□ -1.25
LINC02249-201ENST00000455163 C2orf72A6NCS6 295 aa7.23□□□□□ -1.25
LINC02249-201ENST00000455163 DMRTA1Q5VZB9 504 aa7.23□□□□□ -1.25
LINC02249-201ENST00000455163 TK2O00142 265 aa7.22□□□□□ -1.25
LINC02249-201ENST00000455163 SLC34A2O95436 690 aa7.22□□□□□ -1.25
LINC02249-201ENST00000455163 IRX2Q9BZI1 471 aaPredicted RBP7.22□□□□□ -1.25
LINC02249-201ENST00000455163 CUX1P39880 1505 aa7.22□□□□□ -1.25
LINC02249-201ENST00000455163 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP7.21□□□□□ -1.26
LINC02249-201ENST00000455163 RGS20O76081 388 aa7.21□□□□□ -1.26
LINC02249-201ENST00000455163 FBXO22Q8NEZ5 403 aa7.21□□□□□ -1.26
LINC02249-201ENST00000455163 RNF25Q96BH1 459 aaPredicted RBP7.21□□□□□ -1.26
LINC02249-201ENST00000455163 KCTD12Q96CX2 325 aaKnown RBP7.21□□□□□ -1.26
LINC02249-201ENST00000455163 ZFP91Q96JP5 570 aaPredicted RBP7.21□□□□□ -1.26
LINC02249-201ENST00000455163 FGD5Q6ZNL6 1462 aa7.21□□□□□ -1.26
LINC02249-201ENST00000455163 TDRD9Q8NDG6 1382 aaKnown RBP7.2□□□□□ -1.26
LINC02249-201ENST00000455163 SOGA1O94964 1423 aa7.2□□□□□ -1.26
LINC02249-201ENST00000455163 ARAP1Q96P48 1450 aa7.2□□□□□ -1.26
LINC02249-201ENST00000455163 KDM4FA0A1W2PPD8 638 aa7.2□□□□□ -1.26
LINC02249-201ENST00000455163 PSEN2P49810 448 aa7.2□□□□□ -1.26
LINC02249-201ENST00000455163 WDR97A6NE52 1622 aa7.19□□□□□ -1.26
LINC02249-201ENST00000455163 SNAPC4Q5SXM2 1469 aa7.19□□□□□ -1.26
LINC02249-201ENST00000455163 IFFO2Q5TF58 517 aa7.19□□□□□ -1.26
LINC02249-201ENST00000455163 CYB5RLQ6IPT4 315 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms