RNA–Protein interactions for RNA: ENST00000454561.2

TRBV5-4-201, Transcript of T cell receptor beta variable 5-4, humanhuman

APPRIS P1 BASIC

Gene TRBV5-4, Length 544 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-4-201ENST00000454561 ADGRL1O94910 1474 aa11.82□□□□□ -0.52
TRBV5-4-201ENST00000454561 ARHGAP5Q13017 1502 aa11.81□□□□□ -0.52
TRBV5-4-201ENST00000454561 VPS8Q8N3P4 1428 aa11.81□□□□□ -0.52
TRBV5-4-201ENST00000454561 PREX2Q70Z35 1606 aa11.79□□□□□ -0.52
TRBV5-4-201ENST00000454561 FRMPD1Q5SYB0 1578 aa11.79□□□□□ -0.52
TRBV5-4-201ENST00000454561 ZNF777Q9ULD5 760 aaPredicted RBP11.78□□□□□ -0.52
TRBV5-4-201ENST00000454561 CCNB3Q8WWL7 1395 aa11.78□□□□□ -0.52
TRBV5-4-201ENST00000454561 GPATCH8Q9UKJ3 1502 aaKnown RBP11.77□□□□□ -0.52
TRBV5-4-201ENST00000454561 CFDP1Q9UEE9 299 aaPredicted RBP11.77□□□□□ -0.53
TRBV5-4-201ENST00000454561 APLP2Q06481 763 aa11.76□□□□□ -0.53
TRBV5-4-201ENST00000454561 AFAP1Q8N556 730 aa11.76□□□□□ -0.53
TRBV5-4-201ENST00000454561 ARID4BQ4LE39 1312 aaPredicted RBP11.76□□□□□ -0.53
TRBV5-4-201ENST00000454561 POGZQ7Z3K3 1410 aa11.76□□□□□ -0.53
TRBV5-4-201ENST00000454561 MAGI2Q86UL8 1455 aa11.76□□□□□ -0.53
TRBV5-4-201ENST00000454561 EHBP1L1Q8N3D4 1523 aa11.76□□□□□ -0.53
TRBV5-4-201ENST00000454561 TIAM1Q13009 1591 aa11.75□□□□□ -0.53
TRBV5-4-201ENST00000454561 MYT1LQ9UL68 1186 aa11.75□□□□□ -0.53
TRBV5-4-201ENST00000454561 ZMYM4Q5VZL5 1548 aa11.75□□□□□ -0.53
TRBV5-4-201ENST00000454561 SUPT6HQ7KZ85 1726 aaKnown RBP11.74□□□□□ -0.53
TRBV5-4-201ENST00000454561 ZNF518AQ6AHZ1 1483 aa11.74□□□□□ -0.53
TRBV5-4-201ENST00000454561 MAP3K1Q13233 1512 aa11.73□□□□□ -0.53
TRBV5-4-201ENST00000454561 ITSN2Q9NZM3 1697 aa11.72□□□□□ -0.53
TRBV5-4-201ENST00000454561 ZFYVE16Q7Z3T8 1539 aa11.72□□□□□ -0.53
TRBV5-4-201ENST00000454561 HNRNPMP52272 730 aaKnown RBP eCLIP11.72□□□□□ -0.53
TRBV5-4-201ENST00000454561 ARHGEF40Q8TER5 1519 aa11.71□□□□□ -0.53
TRBV5-4-201ENST00000454561 ARHGEF12Q9NZN5 1544 aa11.71□□□□□ -0.53
TRBV5-4-201ENST00000454561 LRRC9Q6ZRR7 1453 aa11.71□□□□□ -0.53
TRBV5-4-201ENST00000454561 YEATS2Q9ULM3 1422 aa11.71□□□□□ -0.53
TRBV5-4-201ENST00000454561 KANK4Q5T7N3 995 aaPredicted RBP11.71□□□□□ -0.53
TRBV5-4-201ENST00000454561 ABCC1P33527 1531 aa11.7□□□□□ -0.54
TRBV5-4-201ENST00000454561 ATP10AO60312 1499 aa11.7□□□□□ -0.54
TRBV5-4-201ENST00000454561 NCOA2Q15596 1464 aa11.7□□□□□ -0.54
TRBV5-4-201ENST00000454561 PLEKHH2Q8IVE3 1493 aa11.7□□□□□ -0.54
TRBV5-4-201ENST00000454561 TRAPPC8Q9Y2L5 1435 aa11.7□□□□□ -0.54
TRBV5-4-201ENST00000454561 KDM5CP41229 1560 aa11.7□□□□□ -0.54
TRBV5-4-201ENST00000454561 SAMD9LQ8IVG5 1584 aa11.7□□□□□ -0.54
TRBV5-4-201ENST00000454561 KIAA1107Q9UPP5 1409 aa11.69□□□□□ -0.54
TRBV5-4-201ENST00000454561 MLH3Q9UHC1 1453 aa11.69□□□□□ -0.54
TRBV5-4-201ENST00000454561 BCORL1Q5H9F3 1711 aa11.69□□□□□ -0.54
TRBV5-4-201ENST00000454561 ZNF644Q9H582 1327 aaPredicted RBP11.68□□□□□ -0.54
TRBV5-4-201ENST00000454561 HECW2Q9P2P5 1572 aa11.68□□□□□ -0.54
TRBV5-4-201ENST00000454561 ADAMTSL3P82987 1691 aa11.68□□□□□ -0.54
TRBV5-4-201ENST00000454561 KIDINS220Q9ULH0 1771 aa11.67□□□□□ -0.54
TRBV5-4-201ENST00000454561 SPAG9O60271 1321 aaKnown RBP11.67□□□□□ -0.54
TRBV5-4-201ENST00000454561 SETD1BQ9UPS6 1966 aaKnown RBP11.67□□□□□ -0.54
TRBV5-4-201ENST00000454561 SYCP2Q9BX26 1530 aa11.66□□□□□ -0.54
TRBV5-4-201ENST00000454561 MLECQ14165 292 aa11.66□□□□□ -0.54
TRBV5-4-201ENST00000454561 RSPH4AQ5TD94 716 aa11.66□□□□□ -0.54
TRBV5-4-201ENST00000454561 C9orf84Q5VXU9 1444 aa11.65□□□□□ -0.54
TRBV5-4-201ENST00000454561 SIGLEC1Q9BZZ2 1709 aa11.65□□□□□ -0.54
TRBV5-4-201ENST00000454561 DIP2CQ9Y2E4 1556 aa11.63□□□□□ -0.55
TRBV5-4-201ENST00000454561 ABCA6Q8N139 1617 aa11.63□□□□□ -0.55
TRBV5-4-201ENST00000454561 MADDQ8WXG6 1647 aa11.63□□□□□ -0.55
TRBV5-4-201ENST00000454561 MBD5Q9P267 1494 aa11.62□□□□□ -0.55
TRBV5-4-201ENST00000454561 RIMS1Q86UR5 1692 aaKnown RBP11.62□□□□□ -0.55
TRBV5-4-201ENST00000454561 FER1L4A9Z1Z3 1794 aa11.62□□□□□ -0.55
TRBV5-4-201ENST00000454561 TSPY4P0CV99 314 aa11.61□□□□□ -0.55
TRBV5-4-201ENST00000454561 TSPY10P0CW01 314 aa11.61□□□□□ -0.55
TRBV5-4-201ENST00000454561 PTPRMP28827 1452 aa11.61□□□□□ -0.55
TRBV5-4-201ENST00000454561 CAMSAP2Q08AD1 1489 aa11.61□□□□□ -0.55
TRBV5-4-201ENST00000454561 REREQ9P2R6 1566 aa11.61□□□□□ -0.55
TRBV5-4-201ENST00000454561 MYOM3Q5VTT5 1437 aa11.6□□□□□ -0.55
TRBV5-4-201ENST00000454561 ATP7AQ04656 1500 aa11.6□□□□□ -0.55
TRBV5-4-201ENST00000454561 MIA2Q96PC5 1412 aa11.6□□□□□ -0.55
TRBV5-4-201ENST00000454561 AGLP35573 1532 aa11.59□□□□□ -0.55
TRBV5-4-201ENST00000454561 RTEL1-TNFRSF6BF6WH68 1400 aa11.59□□□□□ -0.55
TRBV5-4-201ENST00000454561 ADGBQ8N7X0 1667 aa11.59□□□□□ -0.55
TRBV5-4-201ENST00000454561 INO80Q9ULG1 1556 aaPredicted RBP11.58□□□□□ -0.55
TRBV5-4-201ENST00000454561 CCDC141Q6ZP82 1450 aa11.58□□□□□ -0.56
TRBV5-4-201ENST00000454561 ESF1Q9H501 851 aaKnown RBP11.58□□□□□ -0.56
TRBV5-4-201ENST00000454561 ARHGEF5Q12774 1597 aa11.58□□□□□ -0.56
TRBV5-4-201ENST00000454561 PLPPR3Q6T4P5 718 aa11.57□□□□□ -0.56
TRBV5-4-201ENST00000454561 A2MP01023 1474 aa11.57□□□□□ -0.56
TRBV5-4-201ENST00000454561 SENP3Q9H4L4 574 aaPredicted RBP11.56□□□□□ -0.56
TRBV5-4-201ENST00000454561 DHX29Q7Z478 1369 aaKnown RBP11.54□□□□□ -0.56
TRBV5-4-201ENST00000454561 PTPN23Q9H3S7 1636 aa11.54□□□□□ -0.56
TRBV5-4-201ENST00000454561 GGT6Q6P531 493 aa11.54□□□□□ -0.56
TRBV5-4-201ENST00000454561 PHF23Q9BUL5 403 aaPredicted RBP11.54□□□□□ -0.56
TRBV5-4-201ENST00000454561 FGD6Q6ZV73 1430 aa11.53□□□□□ -0.56
TRBV5-4-201ENST00000454561 CEBPAP49715 358 aaPredicted RBP11.53□□□□□ -0.56
TRBV5-4-201ENST00000454561 PPP6R1Q9UPN7 881 aa11.53□□□□□ -0.56
TRBV5-4-201ENST00000454561 PLXNC1O60486 1568 aa11.52□□□□□ -0.57
TRBV5-4-201ENST00000454561 CFAP65Q6ZU64 1925 aaKnown RBP11.52□□□□□ -0.57
TRBV5-4-201ENST00000454561 KIF3BO15066 747 aa11.51□□□□□ -0.57
TRBV5-4-201ENST00000454561 PPARGC1BQ86YN6 1023 aaKnown RBP11.51□□□□□ -0.57
TRBV5-4-201ENST00000454561 CNTLNQ9NXG0 1405 aa11.51□□□□□ -0.57
TRBV5-4-201ENST00000454561 MAST1Q9Y2H9 1570 aa11.5□□□□□ -0.57
TRBV5-4-201ENST00000454561 C3P01024 1663 aa11.5□□□□□ -0.57
TRBV5-4-201ENST00000454561 FAM50AQ14320 339 aaKnown RBP11.5□□□□□ -0.57
TRBV5-4-201ENST00000454561 TCOF1Q13428 1488 aaKnown RBP11.5□□□□□ -0.57
TRBV5-4-201ENST00000454561 ABCC5O15440 1437 aa11.49□□□□□ -0.57
TRBV5-4-201ENST00000454561 ZMYM3Q14202 1370 aa11.48□□□□□ -0.57
TRBV5-4-201ENST00000454561 MROH2AA6NES4 1674 aa11.48□□□□□ -0.57
TRBV5-4-201ENST00000454561 CROCC2H7BZ55 1655 aa11.48□□□□□ -0.57
TRBV5-4-201ENST00000454561 CLTCQ00610 1675 aaKnown RBP11.48□□□□□ -0.57
TRBV5-4-201ENST00000454561 DNMT1P26358 1616 aaKnown RBP11.47□□□□□ -0.57
TRBV5-4-201ENST00000454561 DAPK1P53355 1430 aa11.47□□□□□ -0.57
TRBV5-4-201ENST00000454561 CHIC2Q9UKJ5 165 aa11.47□□□□□ -0.57
TRBV5-4-201ENST00000454561 PREX1Q8TCU6 1659 aa11.46□□□□□ -0.57
TRBV5-4-201ENST00000454561 RRP7BPQ9NSQ0 103 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms