RNA–Protein interactions for RNA: ENST00000453705.1

BRCC3-208, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 5

Gene BRCC3, Length 2,694 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-208ENST00000453705 RSPH6AQ9H0K4 717 aa11.37□□□□□ -0.59
BRCC3-208ENST00000453705 RGS22Q8NE09 1264 aa11.36□□□□□ -0.59
BRCC3-208ENST00000453705 GRIN2BQ13224 1484 aa11.36□□□□□ -0.59
BRCC3-208ENST00000453705 FGD1P98174 961 aa11.36□□□□□ -0.59
BRCC3-208ENST00000453705 FHAD1B1AJZ9 1412 aa11.36□□□□□ -0.59
BRCC3-208ENST00000453705 A0A0U1RQG5 324 aaPredicted RBP11.35□□□□□ -0.59
BRCC3-208ENST00000453705 NEUROD2Q15784 382 aa11.35□□□□□ -0.59
BRCC3-208ENST00000453705 SCAF1Q9H7N4 1312 aaKnown RBP11.35□□□□□ -0.59
BRCC3-208ENST00000453705 EIF4G3O43432 1585 aaKnown RBP11.34□□□□□ -0.59
BRCC3-208ENST00000453705 ZFP91Q96JP5 570 aaPredicted RBP11.33□□□□□ -0.59
BRCC3-208ENST00000453705 TIAM1Q13009 1591 aa11.33□□□□□ -0.6
BRCC3-208ENST00000453705 FYCO1Q9BQS8 1478 aa11.32□□□□□ -0.6
BRCC3-208ENST00000453705 PCGF6Q9BYE7 350 aa11.32□□□□□ -0.6
BRCC3-208ENST00000453705 MAGI1Q96QZ7 1491 aaPredicted RBP11.31□□□□□ -0.6
BRCC3-208ENST00000453705 UGGT2Q9NYU1 1516 aa11.31□□□□□ -0.6
BRCC3-208ENST00000453705 TMED8Q6PL24 325 aaPredicted RBP11.3□□□□□ -0.6
BRCC3-208ENST00000453705 SLC4A2P04920 1241 aa11.3□□□□□ -0.6
BRCC3-208ENST00000453705 CWC22Q9HCG8 908 aaKnown RBP11.3□□□□□ -0.6
BRCC3-208ENST00000453705 APBB1O00213 710 aa11.29□□□□□ -0.6
BRCC3-208ENST00000453705 USP35Q9P2H5 1018 aa11.29□□□□□ -0.6
BRCC3-208ENST00000453705 PCF11O94913 1555 aaKnown RBP11.29□□□□□ -0.6
BRCC3-208ENST00000453705 IQGAP2Q13576 1575 aa11.29□□□□□ -0.6
BRCC3-208ENST00000453705 ZNF592Q92610 1267 aa11.28□□□□□ -0.6
BRCC3-208ENST00000453705 CASKIN1Q8WXD9 1431 aa11.28□□□□□ -0.6
BRCC3-208ENST00000453705 SNAPC4Q5SXM2 1469 aa11.26□□□□□ -0.61
BRCC3-208ENST00000453705 RRBP1Q9P2E9 1410 aaKnown RBP11.26□□□□□ -0.61
BRCC3-208ENST00000453705 TDRD9Q8NDG6 1382 aaKnown RBP11.26□□□□□ -0.61
BRCC3-208ENST00000453705 VASPP50552 380 aaPredicted RBP11.25□□□□□ -0.61
BRCC3-208ENST00000453705 FMN1Q68DA7 1419 aa11.25□□□□□ -0.61
BRCC3-208ENST00000453705 LRRIQ1Q96JM4 1722 aa11.25□□□□□ -0.61
BRCC3-208ENST00000453705 FAM177A1Q8N128 213 aaPredicted RBP11.25□□□□□ -0.61
BRCC3-208ENST00000453705 ZEB1P37275 1124 aaPredicted RBP11.23□□□□□ -0.61
BRCC3-208ENST00000453705 ZNF608Q9ULD9 1512 aaPredicted RBP11.23□□□□□ -0.61
BRCC3-208ENST00000453705 RGL2O15211 777 aa11.23□□□□□ -0.61
BRCC3-208ENST00000453705 KIAA0586Q9BVV6 1533 aa11.23□□□□□ -0.61
BRCC3-208ENST00000453705 AEBP1Q8IUX7 1158 aa11.22□□□□□ -0.61
BRCC3-208ENST00000453705 SYNJ2O15056 1496 aa11.21□□□□□ -0.61
BRCC3-208ENST00000453705 GRIN2AQ12879 1464 aa11.21□□□□□ -0.61
BRCC3-208ENST00000453705 BCCIPQ9P287 314 aaKnown RBP eCLIP11.21□□□□□ -0.61
BRCC3-208ENST00000453705 HECW1Q76N89 1606 aa11.21□□□□□ -0.62
BRCC3-208ENST00000453705 LRRC9Q6ZRR7 1453 aa11.21□□□□□ -0.62
BRCC3-208ENST00000453705 KIAA0556O60303 1618 aa11.2□□□□□ -0.62
BRCC3-208ENST00000453705 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.2□□□□□ -0.62
BRCC3-208ENST00000453705 RNF216Q9NWF9 866 aaPredicted RBP11.2□□□□□ -0.62
BRCC3-208ENST00000453705 NUP160Q12769 1436 aa11.19□□□□□ -0.62
BRCC3-208ENST00000453705 CCDC18Q5T9S5 1454 aa11.19□□□□□ -0.62
BRCC3-208ENST00000453705 ARHGEF11O15085 1522 aa11.18□□□□□ -0.62
BRCC3-208ENST00000453705 CERS3Q8IU89 383 aa11.18□□□□□ -0.62
BRCC3-208ENST00000453705 RSPH4AQ5TD94 716 aa11.17□□□□□ -0.62
BRCC3-208ENST00000453705 CEP170Q5SW79 1584 aa11.17□□□□□ -0.62
BRCC3-208ENST00000453705 EHBP1L1Q8N3D4 1523 aa11.17□□□□□ -0.62
BRCC3-208ENST00000453705 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.16□□□□□ -0.62
BRCC3-208ENST00000453705 ECM2O94769 699 aaPredicted RBP11.15□□□□□ -0.62
BRCC3-208ENST00000453705 SHROOM2Q13796 1616 aa11.15□□□□□ -0.62
BRCC3-208ENST00000453705 LMOD2Q6P5Q4 547 aa11.14□□□□□ -0.63
BRCC3-208ENST00000453705 ZNF526Q8TF50 670 aaPredicted RBP11.14□□□□□ -0.63
BRCC3-208ENST00000453705 SUPT6HQ7KZ85 1726 aaKnown RBP11.14□□□□□ -0.63
BRCC3-208ENST00000453705 DISP1Q96F81 1524 aa11.13□□□□□ -0.63
BRCC3-208ENST00000453705 FHOD3Q2V2M9 1422 aa11.13□□□□□ -0.63
BRCC3-208ENST00000453705 PPM1GO15355 546 aaPredicted RBP11.13□□□□□ -0.63
BRCC3-208ENST00000453705 ADCY10Q96PN6 1610 aa11.12□□□□□ -0.63
BRCC3-208ENST00000453705 ILDR1Q86SU0 546 aaPredicted RBP11.12□□□□□ -0.63
BRCC3-208ENST00000453705 CCDC82Q8N4S0 544 aa11.12□□□□□ -0.63
BRCC3-208ENST00000453705 SLC24A3Q9HC58 644 aa11.12□□□□□ -0.63
BRCC3-208ENST00000453705 ANO8Q9HCE9 1232 aaPredicted RBP11.12□□□□□ -0.63
BRCC3-208ENST00000453705 MFAP1P55081 439 aaKnown RBP11.12□□□□□ -0.63
BRCC3-208ENST00000453705 TICAM2Q86XR7 235 aa11.11□□□□□ -0.63
BRCC3-208ENST00000453705 RAPGEF6Q8TEU7 1601 aa11.1□□□□□ -0.63
BRCC3-208ENST00000453705 CHGAP10645 457 aaKnown RBP11.1□□□□□ -0.63
BRCC3-208ENST00000453705 CHD1O14646 1710 aa11.09□□□□□ -0.63
BRCC3-208ENST00000453705 PRDM10Q9NQV6 1147 aa11.07□□□□□ -0.64
BRCC3-208ENST00000453705 TCOF1Q13428 1488 aaKnown RBP11.07□□□□□ -0.64
BRCC3-208ENST00000453705 CLSPNQ9HAW4 1339 aa11.07□□□□□ -0.64
BRCC3-208ENST00000453705 CCNB3Q8WWL7 1395 aa11.07□□□□□ -0.64
BRCC3-208ENST00000453705 ABCA8O94911 1581 aa11.05□□□□□ -0.64
BRCC3-208ENST00000453705 EPRSP07814 1512 aaKnown RBP11.05□□□□□ -0.64
BRCC3-208ENST00000453705 TMCO4Q5TGY1 634 aa11.05□□□□□ -0.64
BRCC3-208ENST00000453705 PRDM16Q9HAZ2 1276 aa11.05□□□□□ -0.64
BRCC3-208ENST00000453705 PPARGC1BQ86YN6 1023 aaKnown RBP11.05□□□□□ -0.64
BRCC3-208ENST00000453705 GZF1Q9H116 711 aaPredicted RBP11.05□□□□□ -0.64
BRCC3-208ENST00000453705 KANK4Q5T7N3 995 aaPredicted RBP11.04□□□□□ -0.64
BRCC3-208ENST00000453705 CHMP7Q8WUX9 453 aaPredicted RBP11.04□□□□□ -0.64
BRCC3-208ENST00000453705 ARID4BQ4LE39 1312 aaPredicted RBP11.04□□□□□ -0.64
BRCC3-208ENST00000453705 PSMD1Q99460 953 aa11.03□□□□□ -0.64
BRCC3-208ENST00000453705 NAP1L5Q96NT1 182 aaPredicted RBP11.03□□□□□ -0.64
BRCC3-208ENST00000453705 MAGI3Q5TCQ9 1506 aa11.03□□□□□ -0.64
BRCC3-208ENST00000453705 MKRN3Q13064 507 aaKnown RBP11.02□□□□□ -0.64
BRCC3-208ENST00000453705 CLASP1Q7Z460 1538 aa11.02□□□□□ -0.64
BRCC3-208ENST00000453705 KDM4AO75164 1064 aa11.02□□□□□ -0.65
BRCC3-208ENST00000453705 ITSN2Q9NZM3 1697 aa11.02□□□□□ -0.65
BRCC3-208ENST00000453705 AKNAQ7Z591 1439 aa11.02□□□□□ -0.65
BRCC3-208ENST00000453705 ATF5Q9Y2D1 282 aaPredicted RBP11.02□□□□□ -0.65
BRCC3-208ENST00000453705 GCC2Q8IWJ2 1684 aa11.02□□□□□ -0.65
BRCC3-208ENST00000453705 PHLDB1Q86UU1 1377 aa11.01□□□□□ -0.65
BRCC3-208ENST00000453705 MIA2Q96PC5 1412 aa11□□□□□ -0.65
BRCC3-208ENST00000453705 GPBP1L1Q9HC44 474 aaPredicted RBP11□□□□□ -0.65
BRCC3-208ENST00000453705 FGD6Q6ZV73 1430 aa11□□□□□ -0.65
BRCC3-208ENST00000453705 NUP153P49790 1475 aaKnown RBP11□□□□□ -0.65
BRCC3-208ENST00000453705 NCOA2Q15596 1464 aa11□□□□□ -0.65
BRCC3-208ENST00000453705 PTPN23Q9H3S7 1636 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms