RNA–Protein interactions for RNA: ENST00000453615.1

PSMD4-206, Transcript of proteasome 26S subunit, non-ATPase 4, humanhuman

TSL 3

Gene PSMD4, Length 371 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD4-206ENST00000453615 PTPRMP28827 1452 aa13.86□□□□□ -0.19
PSMD4-206ENST00000453615 FYCO1Q9BQS8 1478 aa13.86□□□□□ -0.19
PSMD4-206ENST00000453615 ARHGAP5Q13017 1502 aa13.85□□□□□ -0.19
PSMD4-206ENST00000453615 MYO5CQ9NQX4 1742 aa13.84□□□□□ -0.19
PSMD4-206ENST00000453615 PCF11O94913 1555 aaKnown RBP13.84□□□□□ -0.19
PSMD4-206ENST00000453615 ZNF518AQ6AHZ1 1483 aa13.84□□□□□ -0.19
PSMD4-206ENST00000453615 ADAMTSL3P82987 1691 aa13.84□□□□□ -0.19
PSMD4-206ENST00000453615 YEATS2Q9ULM3 1422 aa13.83□□□□□ -0.2
PSMD4-206ENST00000453615 MYT1LQ9UL68 1186 aa13.83□□□□□ -0.2
PSMD4-206ENST00000453615 BCORL1Q5H9F3 1711 aa13.83□□□□□ -0.2
PSMD4-206ENST00000453615 ATP10AO60312 1499 aa13.8□□□□□ -0.2
PSMD4-206ENST00000453615 MADDQ8WXG6 1647 aa13.79□□□□□ -0.2
PSMD4-206ENST00000453615 C9orf84Q5VXU9 1444 aa13.79□□□□□ -0.2
PSMD4-206ENST00000453615 MLECQ14165 292 aa13.78□□□□□ -0.2
PSMD4-206ENST00000453615 AFAP1Q8N556 730 aa13.78□□□□□ -0.2
PSMD4-206ENST00000453615 LRRIQ1Q96JM4 1722 aa13.76□□□□□ -0.21
PSMD4-206ENST00000453615 MTUS2Q5JR59 1369 aa13.75□□□□□ -0.21
PSMD4-206ENST00000453615 PREX2Q70Z35 1606 aa13.75□□□□□ -0.21
PSMD4-206ENST00000453615 KDM5CP41229 1560 aa13.75□□□□□ -0.21
PSMD4-206ENST00000453615 PLPPR3Q6T4P5 718 aa13.74□□□□□ -0.21
PSMD4-206ENST00000453615 ZNF777Q9ULD5 760 aaPredicted RBP13.74□□□□□ -0.21
PSMD4-206ENST00000453615 RIMS1Q86UR5 1692 aaKnown RBP13.74□□□□□ -0.21
PSMD4-206ENST00000453615 MLH3Q9UHC1 1453 aa13.74□□□□□ -0.21
PSMD4-206ENST00000453615 CCNB3Q8WWL7 1395 aa13.73□□□□□ -0.21
PSMD4-206ENST00000453615 ABCC1P33527 1531 aa13.73□□□□□ -0.21
PSMD4-206ENST00000453615 CEP162Q5TB80 1403 aa13.73□□□□□ -0.21
PSMD4-206ENST00000453615 CFDP1Q9UEE9 299 aaPredicted RBP13.72□□□□□ -0.21
PSMD4-206ENST00000453615 CDC42BPBQ9Y5S2 1711 aa13.71□□□□□ -0.21
PSMD4-206ENST00000453615 ESF1Q9H501 851 aaKnown RBP13.71□□□□□ -0.21
PSMD4-206ENST00000453615 TRAPPC8Q9Y2L5 1435 aa13.71□□□□□ -0.22
PSMD4-206ENST00000453615 ARHGEF12Q9NZN5 1544 aa13.7□□□□□ -0.22
PSMD4-206ENST00000453615 PLEKHH2Q8IVE3 1493 aa13.7□□□□□ -0.22
PSMD4-206ENST00000453615 LMTK3Q96Q04 1460 aa13.7□□□□□ -0.22
PSMD4-206ENST00000453615 GPATCH8Q9UKJ3 1502 aaKnown RBP13.69□□□□□ -0.22
PSMD4-206ENST00000453615 SPAG9O60271 1321 aaKnown RBP13.69□□□□□ -0.22
PSMD4-206ENST00000453615 ILDR1Q86SU0 546 aaPredicted RBP13.69□□□□□ -0.22
PSMD4-206ENST00000453615 REREQ9P2R6 1566 aa13.68□□□□□ -0.22
PSMD4-206ENST00000453615 DIP2CQ9Y2E4 1556 aa13.68□□□□□ -0.22
PSMD4-206ENST00000453615 FER1L4A9Z1Z3 1794 aa13.68□□□□□ -0.22
PSMD4-206ENST00000453615 SIGLEC1Q9BZZ2 1709 aa13.67□□□□□ -0.22
PSMD4-206ENST00000453615 KIAA1107Q9UPP5 1409 aa13.67□□□□□ -0.22
PSMD4-206ENST00000453615 CDC42BPAQ5VT25 1732 aa13.67□□□□□ -0.22
PSMD4-206ENST00000453615 ITSN2Q9NZM3 1697 aa13.66□□□□□ -0.22
PSMD4-206ENST00000453615 HNRNPMP52272 730 aaKnown RBP eCLIP13.66□□□□□ -0.22
PSMD4-206ENST00000453615 AGLP35573 1532 aa13.65□□□□□ -0.22
PSMD4-206ENST00000453615 EHBP1L1Q8N3D4 1523 aa13.65□□□□□ -0.22
PSMD4-206ENST00000453615 SYCP2Q9BX26 1530 aa13.65□□□□□ -0.22
PSMD4-206ENST00000453615 ABCA6Q8N139 1617 aa13.64□□□□□ -0.23
PSMD4-206ENST00000453615 SAMD9LQ8IVG5 1584 aa13.64□□□□□ -0.23
PSMD4-206ENST00000453615 HSPA2P54652 639 aa13.64□□□□□ -0.23
PSMD4-206ENST00000453615 CEBPAP49715 358 aaPredicted RBP13.63□□□□□ -0.23
PSMD4-206ENST00000453615 CNTLNQ9NXG0 1405 aa13.63□□□□□ -0.23
PSMD4-206ENST00000453615 UHRF1BP1Q6BDS2 1440 aa13.6□□□□□ -0.23
PSMD4-206ENST00000453615 KIDINS220Q9ULH0 1771 aa13.6□□□□□ -0.23
PSMD4-206ENST00000453615 ATP7AQ04656 1500 aa13.59□□□□□ -0.23
PSMD4-206ENST00000453615 TIAM1Q13009 1591 aa13.59□□□□□ -0.23
PSMD4-206ENST00000453615 VPS8Q8N3P4 1428 aa13.58□□□□□ -0.24
PSMD4-206ENST00000453615 LOC105371045A0A1W2PR82 267 aa13.58□□□□□ -0.24
PSMD4-206ENST00000453615 FBXO41Q8TF61 875 aa13.58□□□□□ -0.24
PSMD4-206ENST00000453615 DMRT2Q9Y5R5 561 aa13.58□□□□□ -0.24
PSMD4-206ENST00000453615 ZNF644Q9H582 1327 aaPredicted RBP13.58□□□□□ -0.24
PSMD4-206ENST00000453615 PREX1Q8TCU6 1659 aa13.57□□□□□ -0.24
PSMD4-206ENST00000453615 A2MP01023 1474 aa13.57□□□□□ -0.24
PSMD4-206ENST00000453615 RSPH4AQ5TD94 716 aa13.57□□□□□ -0.24
PSMD4-206ENST00000453615 NCOA2Q15596 1464 aa13.56□□□□□ -0.24
PSMD4-206ENST00000453615 INO80Q9ULG1 1556 aaPredicted RBP13.56□□□□□ -0.24
PSMD4-206ENST00000453615 PPP6R1Q9UPN7 881 aa13.55□□□□□ -0.24
PSMD4-206ENST00000453615 SUPT6HQ7KZ85 1726 aaKnown RBP13.55□□□□□ -0.24
PSMD4-206ENST00000453615 RTEL1-TNFRSF6BF6WH68 1400 aa13.55□□□□□ -0.24
PSMD4-206ENST00000453615 GGT6Q6P531 493 aa13.54□□□□□ -0.24
PSMD4-206ENST00000453615 MBD5Q9P267 1494 aa13.54□□□□□ -0.24
PSMD4-206ENST00000453615 SETD1BQ9UPS6 1966 aaKnown RBP13.53□□□□□ -0.24
PSMD4-206ENST00000453615 NPATQ14207 1427 aa13.53□□□□□ -0.24
PSMD4-206ENST00000453615 CCDC141Q6ZP82 1450 aa13.53□□□□□ -0.24
PSMD4-206ENST00000453615 TSPY4P0CV99 314 aa13.52□□□□□ -0.25
PSMD4-206ENST00000453615 TSPY10P0CW01 314 aa13.52□□□□□ -0.25
PSMD4-206ENST00000453615 ZMYM3Q14202 1370 aa13.52□□□□□ -0.25
PSMD4-206ENST00000453615 CAMSAP2Q08AD1 1489 aa13.52□□□□□ -0.25
PSMD4-206ENST00000453615 LRRC9Q6ZRR7 1453 aa13.52□□□□□ -0.25
PSMD4-206ENST00000453615 PLXNC1O60486 1568 aa13.52□□□□□ -0.25
PSMD4-206ENST00000453615 C3P01024 1663 aa13.51□□□□□ -0.25
PSMD4-206ENST00000453615 APLP2Q06481 763 aa13.51□□□□□ -0.25
PSMD4-206ENST00000453615 MAP3K1Q13233 1512 aa13.5□□□□□ -0.25
PSMD4-206ENST00000453615 DHX29Q7Z478 1369 aaKnown RBP13.5□□□□□ -0.25
PSMD4-206ENST00000453615 ADGBQ8N7X0 1667 aa13.5□□□□□ -0.25
PSMD4-206ENST00000453615 MROH2AA6NES4 1674 aa13.49□□□□□ -0.25
PSMD4-206ENST00000453615 CERKQ8TCT0 537 aa13.48□□□□□ -0.25
PSMD4-206ENST00000453615 KIF3BO15066 747 aa13.47□□□□□ -0.25
PSMD4-206ENST00000453615 PTPRTO14522 1441 aa13.46□□□□□ -0.26
PSMD4-206ENST00000453615 ARHGEF5Q12774 1597 aa13.45□□□□□ -0.26
PSMD4-206ENST00000453615 KANK4Q5T7N3 995 aaPredicted RBP13.45□□□□□ -0.26
PSMD4-206ENST00000453615 MYOM3Q5VTT5 1437 aa13.45□□□□□ -0.26
PSMD4-206ENST00000453615 MIA2Q96PC5 1412 aa13.45□□□□□ -0.26
PSMD4-206ENST00000453615 CLTCQ00610 1675 aaKnown RBP13.44□□□□□ -0.26
PSMD4-206ENST00000453615 PTPRKQ15262 1439 aa13.44□□□□□ -0.26
PSMD4-206ENST00000453615 NCOA1Q15788 1441 aa13.44□□□□□ -0.26
PSMD4-206ENST00000453615 FAM135AQ9P2D6 1515 aa13.44□□□□□ -0.26
PSMD4-206ENST00000453615 WASHC2CQ9Y4E1 1318 aa13.43□□□□□ -0.26
PSMD4-206ENST00000453615 KDM5DQ9BY66 1539 aa13.41□□□□□ -0.26
PSMD4-206ENST00000453615 PKD2Q13563 968 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms