RNA–Protein interactions for RNA: ENST00000453527.6

CTSB-204, Transcript of cathepsin B, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CTSB, Length 2,011 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-204ENST00000453527 CAMSAP2Q08AD1 1489 aa25.91■■□□□ 1.74
CTSB-204ENST00000453527 ROCK1Q13464 1354 aa25.9■■□□□ 1.74
CTSB-204ENST00000453527 DIEXFQ68CQ4 756 aaKnown RBP25.9■■□□□ 1.74
CTSB-204ENST00000453527 ABCC2Q92887 1545 aa25.88■■□□□ 1.73
CTSB-204ENST00000453527 SIN3AQ96ST3 1273 aa25.85■■□□□ 1.73
CTSB-204ENST00000453527 KDM6BO15054 1643 aa25.84■■□□□ 1.73
CTSB-204ENST00000453527 TIMELESSQ9UNS1 1208 aa25.83■■□□□ 1.73
CTSB-204ENST00000453527 ZNF777Q9ULD5 760 aaPredicted RBP25.81■■□□□ 1.72
CTSB-204ENST00000453527 CROCC2H7BZ55 1655 aa25.79■■□□□ 1.72
CTSB-204ENST00000453527 NEUROD1Q13562 356 aa25.79■■□□□ 1.72
CTSB-204ENST00000453527 UHRF1BP1LA0JNW5 1464 aa25.79■■□□□ 1.72
CTSB-204ENST00000453527 ACIN1Q9UKV3 1341 aaKnown RBP25.79■■□□□ 1.72
CTSB-204ENST00000453527 ADGBQ8N7X0 1667 aa25.78■■□□□ 1.72
CTSB-204ENST00000453527 PREX2Q70Z35 1606 aa25.73■■□□□ 1.71
CTSB-204ENST00000453527 ADGRL2O95490 1459 aa25.73■■□□□ 1.71
CTSB-204ENST00000453527 CDC42BPBQ9Y5S2 1711 aa25.73■■□□□ 1.71
CTSB-204ENST00000453527 NCOA1Q15788 1441 aa25.73■■□□□ 1.71
CTSB-204ENST00000453527 TRIM52Q96A61 297 aa25.72■■□□□ 1.71
CTSB-204ENST00000453527 ZCCHC11Q5TAX3 1644 aaKnown RBP25.72■■□□□ 1.71
CTSB-204ENST00000453527 KDM5BQ9UGL1 1544 aa25.71■■□□□ 1.71
CTSB-204ENST00000453527 DENND4BO75064 1496 aaPredicted RBP25.7■■□□□ 1.7
CTSB-204ENST00000453527 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.68■■□□□ 1.75e-6■□□□□ 9.5
CTSB-204ENST00000453527 SHANK2Q9UPX8 1470 aa25.68■■□□□ 1.7
CTSB-204ENST00000453527 TTC37Q6PGP7 1564 aa25.67■■□□□ 1.7
CTSB-204ENST00000453527 MPHOSPH9Q99550 1183 aa25.66■■□□□ 1.7
CTSB-204ENST00000453527 ARHGEF5Q12774 1597 aa25.66■■□□□ 1.7
CTSB-204ENST00000453527 ANKRD30AQ9BXX3 1397 aa25.66■■□□□ 1.7
CTSB-204ENST00000453527 SAMD9LQ8IVG5 1584 aa25.65■■□□□ 1.7
CTSB-204ENST00000453527 MBD5Q9P267 1494 aa25.63■■□□□ 1.69
CTSB-204ENST00000453527 MYO5CQ9NQX4 1742 aa25.63■■□□□ 1.69
CTSB-204ENST00000453527 PPP1R15AO75807 674 aaPredicted RBP25.63■■□□□ 1.69
CTSB-204ENST00000453527 OSCARQ8IYS5 282 aa25.62■■□□□ 1.69
CTSB-204ENST00000453527 TONSLQ96HA7 1378 aa25.62■■□□□ 1.69
CTSB-204ENST00000453527 C9orf84Q5VXU9 1444 aa25.62■■□□□ 1.69
CTSB-204ENST00000453527 TSPY4P0CV99 314 aa25.59■■□□□ 1.69
CTSB-204ENST00000453527 TSPY10P0CW01 314 aa25.59■■□□□ 1.69
CTSB-204ENST00000453527 HNRNPMP52272 730 aaKnown RBP eCLIP25.59■■□□□ 1.69
CTSB-204ENST00000453527 ARHGAP5Q13017 1502 aa25.59■■□□□ 1.69
CTSB-204ENST00000453527 RSPH4AQ5TD94 716 aa25.58■■□□□ 1.69
CTSB-204ENST00000453527 KCNH8Q96L42 1107 aa25.58■■□□□ 1.68
CTSB-204ENST00000453527 CCDC141Q6ZP82 1450 aa25.56■■□□□ 1.68
CTSB-204ENST00000453527 ANKRD50Q9ULJ7 1429 aa25.55■■□□□ 1.68
CTSB-204ENST00000453527 PLCH2O75038 1416 aa25.52■■□□□ 1.68
CTSB-204ENST00000453527 SLC4A1APQ9BWU0 796 aaKnown RBP25.51■■□□□ 1.67
CTSB-204ENST00000453527 SYCP2Q9BX26 1530 aa25.51■■□□□ 1.67
CTSB-204ENST00000453527 PZPP20742 1482 aa25.51■■□□□ 1.67
CTSB-204ENST00000453527 PLEKHH2Q8IVE3 1493 aa25.51■■□□□ 1.67
CTSB-204ENST00000453527 KIAA1107Q9UPP5 1409 aa25.5■■□□□ 1.67
CTSB-204ENST00000453527 ANKRD30BQ9BXX2 1392 aa25.49■■□□□ 1.67
CTSB-204ENST00000453527 FOXD1Q16676 465 aa25.48■■□□□ 1.67
CTSB-204ENST00000453527 MAST1Q9Y2H9 1570 aa25.47■■□□□ 1.67
CTSB-204ENST00000453527 KIF15Q9NS87 1388 aa25.47■■□□□ 1.67
CTSB-204ENST00000453527 WDR7Q9Y4E6 1490 aa25.45■■□□□ 1.66
CTSB-204ENST00000453527 EFCAB2Q5VUJ9 269 aa25.43■■□□□ 1.66
CTSB-204ENST00000453527 MIER1Q8N108 512 aa25.42■■□□□ 1.66
CTSB-204ENST00000453527 ARAP3Q8WWN8 1544 aa25.42■■□□□ 1.66
CTSB-204ENST00000453527 RPRD2Q5VT52 1461 aaKnown RBP25.42■■□□□ 1.66
CTSB-204ENST00000453527 ARHGEF12Q9NZN5 1544 aa25.4■■□□□ 1.66
CTSB-204ENST00000453527 KDM5DQ9BY66 1539 aa25.39■■□□□ 1.66
CTSB-204ENST00000453527 ABCC1P33527 1531 aa25.38■■□□□ 1.65
CTSB-204ENST00000453527 PLXNC1O60486 1568 aa25.37■■□□□ 1.65
CTSB-204ENST00000453527 NUP155O75694 1391 aa25.37■■□□□ 1.65
CTSB-204ENST00000453527 ABCA9Q8IUA7 1624 aa25.36■■□□□ 1.65
CTSB-204ENST00000453527 ASXL2Q76L83 1435 aa25.34■■□□□ 1.65
CTSB-204ENST00000453527 PKD2Q13563 968 aa25.34■■□□□ 1.65
CTSB-204ENST00000453527 L3MBTL2Q969R5 705 aa25.33■■□□□ 1.65
CTSB-204ENST00000453527 TEX14Q8IWB6 1497 aa25.3■■□□□ 1.64
CTSB-204ENST00000453527 NPM1P06748 294 aaKnown RBP eCLIP25.29■■□□□ 1.64
CTSB-204ENST00000453527 TRAPPC8Q9Y2L5 1435 aa25.28■■□□□ 1.64
CTSB-204ENST00000453527 DUOX2Q9NRD8 1548 aa25.27■■□□□ 1.64
CTSB-204ENST00000453527 UNC13BO14795 1591 aa25.26■■□□□ 1.63
CTSB-204ENST00000453527 FANCAO15360 1455 aa25.25■■□□□ 1.63
CTSB-204ENST00000453527 FAM135AQ9P2D6 1515 aa25.24■■□□□ 1.63
CTSB-204ENST00000453527 HIRIP3Q9BW71 556 aaPredicted RBP25.23■■□□□ 1.63
CTSB-204ENST00000453527 ERBINQ96RT1 1412 aa25.22■■□□□ 1.63
CTSB-204ENST00000453527 RTEL1-TNFRSF6BF6WH68 1400 aa25.21■■□□□ 1.63
CTSB-204ENST00000453527 SPAG9O60271 1321 aaKnown RBP25.19■■□□□ 1.62
CTSB-204ENST00000453527 AFAP1Q8N556 730 aa25.18■■□□□ 1.62
CTSB-204ENST00000453527 ZFYVE16Q7Z3T8 1539 aa25.17■■□□□ 1.62
CTSB-204ENST00000453527 IQGAP3Q86VI3 1631 aa25.17■■□□□ 1.62
CTSB-204ENST00000453527 MAGI2Q86UL8 1455 aa25.15■■□□□ 1.62
CTSB-204ENST00000453527 DDX10Q13206 875 aaKnown RBP25.15■■□□□ 1.62
CTSB-204ENST00000453527 NBPF8Q3BBV2 869 aa25.15■■□□□ 1.62
CTSB-204ENST00000453527 ADGRL1O94910 1474 aa25.14■■□□□ 1.62
CTSB-204ENST00000453527 SCAPERQ9BY12 1400 aa25.12■■□□□ 1.61
CTSB-204ENST00000453527 INO80Q9ULG1 1556 aaPredicted RBP25.11■■□□□ 1.61
CTSB-204ENST00000453527 CENPBP07199 599 aaPredicted RBP25.11■■□□□ 1.61
CTSB-204ENST00000453527 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.11■■□□□ 1.61
CTSB-204ENST00000453527 EIF4G2P78344 907 aaKnown RBP eCLIP25.1■■□□□ 1.61
CTSB-204ENST00000453527 HSPA5P11021 654 aaKnown RBP25.1■■□□□ 1.61
CTSB-204ENST00000453527 ATP7AQ04656 1500 aa25.09■■□□□ 1.61
CTSB-204ENST00000453527 CD109Q6YHK3 1445 aa25.07■■□□□ 1.6
CTSB-204ENST00000453527 CFAP74Q9C0B2 1584 aa25.06■■□□□ 1.6
CTSB-204ENST00000453527 YTHDC1Q96MU7 727 aaKnown RBP25.03■■□□□ 1.6
CTSB-204ENST00000453527 PLA2R1Q13018 1463 aa25.02■■□□□ 1.6
CTSB-204ENST00000453527 UHRF1BP1Q6BDS2 1440 aa25.02■■□□□ 1.6
CTSB-204ENST00000453527 CCDC144AA2RUR9 1427 aa25.01■■□□□ 1.59
CTSB-204ENST00000453527 DEPDC5O75140 1603 aa25.01■■□□□ 1.59
CTSB-204ENST00000453527 ZNF518AQ6AHZ1 1483 aa25■■□□□ 1.59
CTSB-204ENST00000453527 ATP10AO60312 1499 aa24.99■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms