RNA–Protein interactions for RNA: ENST00000453514.5

PAPD4-204, Transcript of Poly(A) RNA polymerase GLD2, humanhuman

APPRIS P3 TSL 5 BASIC

Gene PAPD4, Length 3,523 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAPD4-204ENST00000453514 NPM1P06748 294 aaKnown RBP eCLIP12.69□□□□□ -0.38
PAPD4-204ENST00000453514 NAIPQ13075 1403 aa12.69□□□□□ -0.38
PAPD4-204ENST00000453514 ZNF777Q9ULD5 760 aaPredicted RBP12.68□□□□□ -0.38
PAPD4-204ENST00000453514 CDK13Q14004 1512 aaKnown RBP12.68□□□□□ -0.38
PAPD4-204ENST00000453514 FKBP8Q14318 412 aa12.68□□□□□ -0.38
PAPD4-204ENST00000453514 GRIN2AQ12879 1464 aa12.68□□□□□ -0.38
PAPD4-204ENST00000453514 KIAA0586Q9BVV6 1533 aa12.68□□□□□ -0.38
PAPD4-204ENST00000453514 SYNJ2O15056 1496 aa12.68□□□□□ -0.38
PAPD4-204ENST00000453514 NUP153P49790 1475 aaKnown RBP12.65□□□□□ -0.38
PAPD4-204ENST00000453514 IL27Q8NEV9 243 aa12.65□□□□□ -0.38
PAPD4-204ENST00000453514 MAGI1Q96QZ7 1491 aaPredicted RBP12.65□□□□□ -0.38
PAPD4-204ENST00000453514 CARMIL2Q6F5E8 1435 aa12.64□□□□□ -0.39
PAPD4-204ENST00000453514 RAPGEF6Q8TEU7 1601 aa12.64□□□□□ -0.39
PAPD4-204ENST00000453514 PRG4Q92954 1404 aaPredicted RBP12.63□□□□□ -0.39
PAPD4-204ENST00000453514 PODXL2Q9NZ53 605 aa12.63□□□□□ -0.39
PAPD4-204ENST00000453514 RTN4Q9NQC3 1192 aaKnown RBP12.62□□□□□ -0.39
PAPD4-204ENST00000453514 ADCY10Q96PN6 1610 aa12.62□□□□□ -0.39
PAPD4-204ENST00000453514 CDK11AQ9UQ88 783 aaPredicted RBP12.62□□□□□ -0.39
PAPD4-204ENST00000453514 AKNAQ7Z591 1439 aa12.62□□□□□ -0.39
PAPD4-204ENST00000453514 UACAQ9BZF9 1416 aa12.62□□□□□ -0.39
PAPD4-204ENST00000453514 MTUS2Q5JR59 1369 aa12.62□□□□□ -0.39
PAPD4-204ENST00000453514 PTPRGP23470 1445 aa12.6□□□□□ -0.39
PAPD4-204ENST00000453514 NUP160Q12769 1436 aa12.6□□□□□ -0.39
PAPD4-204ENST00000453514 SIN3AQ96ST3 1273 aa12.6□□□□□ -0.39
PAPD4-204ENST00000453514 PLEKHD1A6NEE1 506 aa12.59□□□□□ -0.39
PAPD4-204ENST00000453514 MIA2Q96PC5 1412 aa12.59□□□□□ -0.39
PAPD4-204ENST00000453514 DNMT1P26358 1616 aaKnown RBP12.59□□□□□ -0.39
PAPD4-204ENST00000453514 CROCC2H7BZ55 1655 aa12.57□□□□□ -0.4
PAPD4-204ENST00000453514 TIMELESSQ9UNS1 1208 aa12.55□□□□□ -0.4
PAPD4-204ENST00000453514 KIF14Q15058 1648 aa12.55□□□□□ -0.4
PAPD4-204ENST00000453514 ABCA8O94911 1581 aa12.54□□□□□ -0.4
PAPD4-204ENST00000453514 TRHP20396 242 aaPredicted RBP12.54□□□□□ -0.4
PAPD4-204ENST00000453514 NBR1Q14596 966 aa12.54□□□□□ -0.4
PAPD4-204ENST00000453514 CHIC2Q9UKJ5 165 aa12.53□□□□□ -0.4
PAPD4-204ENST00000453514 PPP1R15AO75807 674 aaPredicted RBP12.53□□□□□ -0.4
PAPD4-204ENST00000453514 CDC42BPAQ5VT25 1732 aa12.52□□□□□ -0.41
PAPD4-204ENST00000453514 ABCC5O15440 1437 aa12.51□□□□□ -0.41
PAPD4-204ENST00000453514 NEFLP07196 543 aa12.51□□□□□ -0.41
PAPD4-204ENST00000453514 PLB1Q6P1J6 1458 aa12.51□□□□□ -0.41
PAPD4-204ENST00000453514 DAPK1P53355 1430 aa12.5□□□□□ -0.41
PAPD4-204ENST00000453514 ADGBQ8N7X0 1667 aa12.5□□□□□ -0.41
PAPD4-204ENST00000453514 ITSN2Q9NZM3 1697 aa12.49□□□□□ -0.41
PAPD4-204ENST00000453514 ROCK1Q13464 1354 aa12.49□□□□□ -0.41
PAPD4-204ENST00000453514 SHROOM2Q13796 1616 aa12.48□□□□□ -0.41
PAPD4-204ENST00000453514 ABCC10Q5T3U5 1492 aa12.47□□□□□ -0.41
PAPD4-204ENST00000453514 GPATCH8Q9UKJ3 1502 aaKnown RBP12.47□□□□□ -0.41
PAPD4-204ENST00000453514 CFDP1Q9UEE9 299 aaPredicted RBP12.46□□□□□ -0.42
PAPD4-204ENST00000453514 TROQ12816 1431 aaPredicted RBP12.46□□□□□ -0.42
PAPD4-204ENST00000453514 CHD1O14646 1710 aa12.45□□□□□ -0.42
PAPD4-204ENST00000453514 ADGRL2O95490 1459 aa12.45□□□□□ -0.42
PAPD4-204ENST00000453514 CAMSAP2Q08AD1 1489 aa12.44□□□□□ -0.42
PAPD4-204ENST00000453514 ZNF644Q9H582 1327 aaPredicted RBP12.43□□□□□ -0.42
PAPD4-204ENST00000453514 PZPP20742 1482 aa12.43□□□□□ -0.42
PAPD4-204ENST00000453514 TEX14Q8IWB6 1497 aa12.43□□□□□ -0.42
PAPD4-204ENST00000453514 NOP58Q9Y2X3 529 aaKnown RBP12.42□□□□□ -0.42
PAPD4-204ENST00000453514 POLR1AO95602 1720 aaPredicted RBP12.42□□□□□ -0.42
PAPD4-204ENST00000453514 ATP10BO94823 1461 aa12.42□□□□□ -0.42
PAPD4-204ENST00000453514 CDC42BPBQ9Y5S2 1711 aa12.41□□□□□ -0.42
PAPD4-204ENST00000453514 ANKRD30BQ9BXX2 1392 aa12.4□□□□□ -0.42
PAPD4-204ENST00000453514 RRP7BPQ9NSQ0 103 aa12.4□□□□□ -0.42
PAPD4-204ENST00000453514 TRIM52Q96A61 297 aa12.4□□□□□ -0.42
PAPD4-204ENST00000453514 RTL5Q5HYW3 569 aaPredicted RBP12.39□□□□□ -0.43
PAPD4-204ENST00000453514 NCOA1Q15788 1441 aa12.39□□□□□ -0.43
PAPD4-204ENST00000453514 PAK3O75914 559 aaPredicted RBP12.39□□□□□ -0.43
PAPD4-204ENST00000453514 RPRD2Q5VT52 1461 aaKnown RBP12.39□□□□□ -0.43
PAPD4-204ENST00000453514 MBD5Q9P267 1494 aa12.39□□□□□ -0.43
PAPD4-204ENST00000453514 ERCC6L2Q5T890 1561 aa12.38□□□□□ -0.43
PAPD4-204ENST00000453514 ZMYND15Q9H091 742 aa12.37□□□□□ -0.43
PAPD4-204ENST00000453514 FAM69CQ0P6D2 419 aa12.37□□□□□ -0.43
PAPD4-204ENST00000453514 PLPPR3Q6T4P5 718 aa12.37□□□□□ -0.43
PAPD4-204ENST00000453514 KDM5DQ9BY66 1539 aa12.36□□□□□ -0.43
PAPD4-204ENST00000453514 PREX2Q70Z35 1606 aa12.35□□□□□ -0.43
PAPD4-204ENST00000453514 MPHOSPH9Q99550 1183 aa12.35□□□□□ -0.43
PAPD4-204ENST00000453514 ARHGEF5Q12774 1597 aa12.35□□□□□ -0.43
PAPD4-204ENST00000453514 SPATA31E1Q6ZUB1 1445 aa12.35□□□□□ -0.43
PAPD4-204ENST00000453514 SHANK2Q9UPX8 1470 aa12.35□□□□□ -0.43
PAPD4-204ENST00000453514 HNRNPMP52272 730 aaKnown RBP eCLIP12.34□□□□□ -0.439e-7■■■■□ 24.4
PAPD4-204ENST00000453514 SAMD9LQ8IVG5 1584 aa12.34□□□□□ -0.43
PAPD4-204ENST00000453514 TSPY4P0CV99 314 aa12.34□□□□□ -0.43
PAPD4-204ENST00000453514 TSPY10P0CW01 314 aa12.34□□□□□ -0.43
PAPD4-204ENST00000453514 GLIPR1L2Q4G1C9 344 aa12.33□□□□□ -0.43
PAPD4-204ENST00000453514 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.33□□□□□ -0.444e-6■□□□□ 11.1
PAPD4-204ENST00000453514 TONSLQ96HA7 1378 aa12.33□□□□□ -0.44
PAPD4-204ENST00000453514 HIRIP3Q9BW71 556 aaPredicted RBP12.32□□□□□ -0.44
PAPD4-204ENST00000453514 C11orf95C9JLR9 678 aaPredicted RBP12.32□□□□□ -0.44
PAPD4-204ENST00000453514 DDX10Q13206 875 aaKnown RBP12.31□□□□□ -0.44
PAPD4-204ENST00000453514 VSIG10Q8N0Z9 540 aa12.31□□□□□ -0.44
PAPD4-204ENST00000453514 CLASP1Q7Z460 1538 aa12.3□□□□□ -0.44
PAPD4-204ENST00000453514 TTC37Q6PGP7 1564 aa12.3□□□□□ -0.44
PAPD4-204ENST00000453514 BCORL1Q5H9F3 1711 aa12.29□□□□□ -0.44
PAPD4-204ENST00000453514 FOXD1Q16676 465 aa12.29□□□□□ -0.44
PAPD4-204ENST00000453514 MAST1Q9Y2H9 1570 aa12.28□□□□□ -0.44
PAPD4-204ENST00000453514 WASHC2AQ641Q2 1341 aa12.28□□□□□ -0.44
PAPD4-204ENST00000453514 NBPF8Q3BBV2 869 aa12.28□□□□□ -0.44
PAPD4-204ENST00000453514 EFCAB2Q5VUJ9 269 aa12.28□□□□□ -0.44
PAPD4-204ENST00000453514 RSPH6AQ9H0K4 717 aa12.27□□□□□ -0.44
PAPD4-204ENST00000453514 L3MBTL2Q969R5 705 aa12.27□□□□□ -0.45
PAPD4-204ENST00000453514 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.27□□□□□ -0.45
PAPD4-204ENST00000453514 KDM5CP41229 1560 aa12.25□□□□□ -0.45
PAPD4-204ENST00000453514 UNC13BO14795 1591 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms