RNA–Protein interactions for RNA: ENST00000453196.5

NIN-206, Transcript of ninein, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NIN, Length 6,785 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIN-206ENST00000453196 TRHP20396 242 aaPredicted RBP17.04■□□□□ 0.32
NIN-206ENST00000453196 CCDC88BA6NC98 1476 aa17.02■□□□□ 0.32
NIN-206ENST00000453196 NUTM2DQ5VT03 806 aaPredicted RBP17.01■□□□□ 0.31
NIN-206ENST00000453196 RAB3GAP2Q9H2M9 1393 aa17.01■□□□□ 0.31
NIN-206ENST00000453196 ARHGAP35Q9NRY4 1499 aa17.01■□□□□ 0.31
NIN-206ENST00000453196 MPHOSPH9Q99550 1183 aa17■□□□□ 0.31
NIN-206ENST00000453196 KANK1Q14678 1352 aa16.99■□□□□ 0.31
NIN-206ENST00000453196 VPS8Q8N3P4 1428 aa16.98■□□□□ 0.31
NIN-206ENST00000453196 HSCBQ8IWL3 235 aa16.98■□□□□ 0.31
NIN-206ENST00000453196 CCER2I3L3R5 266 aa16.98■□□□□ 0.31
NIN-206ENST00000453196 U2AF1L5P0DN76 240 aaPredicted RBP16.97■□□□□ 0.31
NIN-206ENST00000453196 U2AF1Q01081 240 aaKnown RBP eCLIP16.97■□□□□ 0.31
NIN-206ENST00000453196 ERICH6BQ5W0A0 696 aa16.97■□□□□ 0.31
NIN-206ENST00000453196 TDRD9Q8NDG6 1382 aaKnown RBP16.97■□□□□ 0.31
NIN-206ENST00000453196 PAK3O75914 559 aaPredicted RBP16.97■□□□□ 0.31
NIN-206ENST00000453196 ROCK2O75116 1388 aaKnown RBP16.97■□□□□ 0.31
NIN-206ENST00000453196 MROH2BQ7Z745 1585 aa16.96■□□□□ 0.31
NIN-206ENST00000453196 DEKP35659 375 aaKnown RBP16.96■□□□□ 0.31
NIN-206ENST00000453196 CCDC146Q8IYE0 955 aa16.96■□□□□ 0.3
NIN-206ENST00000453196 KTN1Q86UP2 1357 aaKnown RBP16.95■□□□□ 0.3
NIN-206ENST00000453196 RCAN3Q9UKA8 241 aa16.95■□□□□ 0.3
NIN-206ENST00000453196 MS4A1P11836 297 aa16.95■□□□□ 0.3
NIN-206ENST00000453196 NUP155O75694 1391 aa16.95■□□□□ 0.3
NIN-206ENST00000453196 GZF1Q9H116 711 aaPredicted RBP16.94■□□□□ 0.3
NIN-206ENST00000453196 PNNQ9H307 717 aaKnown RBP16.94■□□□□ 0.3
NIN-206ENST00000453196 SLKQ9H2G2 1235 aaPredicted RBP16.94■□□□□ 0.3
NIN-206ENST00000453196 GOLGA2Q08379 1002 aa16.94■□□□□ 0.3
NIN-206ENST00000453196 HNRNPMP52272 730 aaKnown RBP eCLIP16.93■□□□□ 0.3
NIN-206ENST00000453196 RTF1Q92541 710 aaKnown RBP16.93■□□□□ 0.3
NIN-206ENST00000453196 ZNF330Q9Y3S2 320 aaPredicted RBP16.93■□□□□ 0.3
NIN-206ENST00000453196 ITPRIPQ8IWB1 547 aa16.93■□□□□ 0.3
NIN-206ENST00000453196 CLUAP1Q96AJ1 413 aa16.91■□□□□ 0.3
NIN-206ENST00000453196 CHMP4BQ9H444 224 aaKnown RBP16.91■□□□□ 0.3
NIN-206ENST00000453196 L3MBTL2Q969R5 705 aa16.91■□□□□ 0.3
NIN-206ENST00000453196 GOLGA6L4A6NEF3 574 aa16.9■□□□□ 0.3
NIN-206ENST00000453196 NUTM2FA1L443 756 aa16.89■□□□□ 0.29
NIN-206ENST00000453196 TIMELESSQ9UNS1 1208 aa16.88■□□□□ 0.29
NIN-206ENST00000453196 HDGFL2Q7Z4V5 671 aaPredicted RBP16.88■□□□□ 0.29
NIN-206ENST00000453196 AMER1Q5JTC6 1135 aaPredicted RBP16.87■□□□□ 0.29
NIN-206ENST00000453196 KIF3BO15066 747 aa16.86■□□□□ 0.29
NIN-206ENST00000453196 ISY1Q9ULR0 285 aaKnown RBP16.85■□□□□ 0.29
NIN-206ENST00000453196 FHOD3Q2V2M9 1422 aa16.84■□□□□ 0.29
NIN-206ENST00000453196 FOXD4L1Q9NU39 408 aa16.84■□□□□ 0.29
NIN-206ENST00000453196 MFAP1P55081 439 aaKnown RBP16.84■□□□□ 0.29
NIN-206ENST00000453196 ARID3AQ99856 593 aa16.84■□□□□ 0.29
NIN-206ENST00000453196 RRP7AQ9Y3A4 280 aaKnown RBP16.83■□□□□ 0.28
NIN-206ENST00000453196 TSHZ2Q9NRE2 1034 aa16.83■□□□□ 0.28
NIN-206ENST00000453196 MCCP23508 829 aa16.82■□□□□ 0.28
NIN-206ENST00000453196 DRC7Q8IY82 874 aa16.82■□□□□ 0.28
NIN-206ENST00000453196 HDGFP51858 240 aaKnown RBP16.81■□□□□ 0.28
NIN-206ENST00000453196 SMC4Q9NTJ3 1288 aa16.81■□□□□ 0.28
NIN-206ENST00000453196 CSB-PGBD3P0DP91 1061 aa16.81■□□□□ 0.28
NIN-206ENST00000453196 WIZO95785 1651 aa16.81■□□□□ 0.28
NIN-206ENST00000453196 NOL8Q76FK4 1167 aaKnown RBP16.81■□□□□ 0.28
NIN-206ENST00000453196 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.81■□□□□ 0.28
NIN-206ENST00000453196 IPO8O15397 1037 aaKnown RBP16.8■□□□□ 0.28
NIN-206ENST00000453196 RALBP1Q15311 655 aa16.8■□□□□ 0.28
NIN-206ENST00000453196 SLC4A10Q6U841 1118 aa16.8■□□□□ 0.28
NIN-206ENST00000453196 LTV1Q96GA3 475 aaPredicted RBP16.79■□□□□ 0.28
NIN-206ENST00000453196 TRAK1Q9UPV9 953 aa16.78■□□□□ 0.28
NIN-206ENST00000453196 MSNP26038 577 aaKnown RBP16.78■□□□□ 0.28
NIN-206ENST00000453196 PLIN1O60240 522 aa16.78■□□□□ 0.28
NIN-206ENST00000453196 KIAA1211Q6ZU35 1233 aa16.78■□□□□ 0.28
NIN-206ENST00000453196 EFCAB2Q5VUJ9 269 aa16.77■□□□□ 0.28
NIN-206ENST00000453196 BCL2L13Q9BXK5 485 aa16.77■□□□□ 0.28
NIN-206ENST00000453196 RWDD1Q9H446 243 aaPredicted RBP16.77■□□□□ 0.28
NIN-206ENST00000453196 ANKRD30AQ9BXX3 1397 aa16.77■□□□□ 0.28
NIN-206ENST00000453196 CHMP3Q9Y3E7 222 aa16.77■□□□□ 0.27
NIN-206ENST00000453196 NCBP3Q53F19 620 aaKnown RBP16.76■□□□□ 0.27
NIN-206ENST00000453196 CARMIL2Q6F5E8 1435 aa16.76■□□□□ 0.27
NIN-206ENST00000453196 GOLGA6L6A8MZA4 724 aa16.76■□□□□ 0.27
NIN-206ENST00000453196 TRIM6-TRIM34B2RNG4 842 aa16.75■□□□□ 0.27
NIN-206ENST00000453196 GNL2Q13823 731 aaKnown RBP16.75■□□□□ 0.27
NIN-206ENST00000453196 ST20-MTHFSA0A0A6YYL1 179 aa16.75■□□□□ 0.27
NIN-206ENST00000453196 ELL2O00472 640 aaPredicted RBP16.75■□□□□ 0.27
NIN-206ENST00000453196 CLSTN1O94985 981 aa16.75■□□□□ 0.27
NIN-206ENST00000453196 RAPGEF2Q9Y4G8 1499 aa16.74■□□□□ 0.27
NIN-206ENST00000453196 FMN1Q68DA7 1419 aa16.74■□□□□ 0.27
NIN-206ENST00000453196 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.74■□□□□ 0.27
NIN-206ENST00000453196 FOXD4L5Q5VV16 416 aaPredicted RBP16.73■□□□□ 0.27
NIN-206ENST00000453196 FOXD4L4Q8WXT5 416 aaPredicted RBP16.73■□□□□ 0.27
NIN-206ENST00000453196 TCERG1O14776 1098 aaKnown RBP16.73■□□□□ 0.27
NIN-206ENST00000453196 L1TD1Q5T7N2 865 aaKnown RBP16.73■□□□□ 0.27
NIN-206ENST00000453196 SLC4A3P48751 1232 aa16.72■□□□□ 0.27
NIN-206ENST00000453196 RUSC2Q8N2Y8 1516 aa16.72■□□□□ 0.27
NIN-206ENST00000453196 PANK3Q9H999 370 aa16.71■□□□□ 0.27
NIN-206ENST00000453196 WASHC2CQ9Y4E1 1318 aa16.7■□□□□ 0.26
NIN-206ENST00000453196 NLRP13Q86W25 1043 aa16.69■□□□□ 0.26
NIN-206ENST00000453196 CCDC9Q9Y3X0 531 aaKnown RBP16.69■□□□□ 0.26
NIN-206ENST00000453196 STK31Q9BXU1 1019 aa16.69■□□□□ 0.26
NIN-206ENST00000453196 CENPJQ9HC77 1338 aaPredicted RBP16.69■□□□□ 0.26
NIN-206ENST00000453196 NRDCO43847 1150 aa16.69■□□□□ 0.26
NIN-206ENST00000453196 CHAF1AQ13111 956 aaPredicted RBP16.69■□□□□ 0.26
NIN-206ENST00000453196 NGDNQ8NEJ9 315 aaKnown RBP16.69■□□□□ 0.26
NIN-206ENST00000453196 SPAG9O60271 1321 aaKnown RBP16.69■□□□□ 0.26
NIN-206ENST00000453196 GBP4Q96PP9 640 aa16.68■□□□□ 0.26
NIN-206ENST00000453196 PMFBP1Q8TBY8 1022 aa16.68■□□□□ 0.26
NIN-206ENST00000453196 CALD1Q05682 793 aaKnown RBP16.67■□□□□ 0.26
NIN-206ENST00000453196 IPO9Q96P70 1041 aaKnown RBP16.66■□□□□ 0.26
NIN-206ENST00000453196 TERF2IPQ9NYB0 399 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms