RNA–Protein interactions for RNA: ENST00000452193.5

SMARCA2-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 3

Gene SMARCA2, Length 750 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-215ENST00000452193 TTC37Q6PGP7 1564 aa18.84■□□□□ 0.61
SMARCA2-215ENST00000452193 CCDC18Q5T9S5 1454 aa18.84■□□□□ 0.61
SMARCA2-215ENST00000452193 PTPRMP28827 1452 aa18.83■□□□□ 0.6
SMARCA2-215ENST00000452193 FRMPD1Q5SYB0 1578 aa18.81■□□□□ 0.6
SMARCA2-215ENST00000452193 MYT1LQ9UL68 1186 aa18.81■□□□□ 0.6
SMARCA2-215ENST00000452193 ZMYM4Q5VZL5 1548 aa18.8■□□□□ 0.6
SMARCA2-215ENST00000452193 KIF14Q15058 1648 aa18.8■□□□□ 0.6
SMARCA2-215ENST00000452193 ZFYVE16Q7Z3T8 1539 aa18.79■□□□□ 0.6
SMARCA2-215ENST00000452193 ARHGEF40Q8TER5 1519 aa18.79■□□□□ 0.6
SMARCA2-215ENST00000452193 HECW2Q9P2P5 1572 aa18.79■□□□□ 0.6
SMARCA2-215ENST00000452193 ARHGAP5Q13017 1502 aa18.77■□□□□ 0.6
SMARCA2-215ENST00000452193 ZNF518AQ6AHZ1 1483 aa18.77■□□□□ 0.59
SMARCA2-215ENST00000452193 ADAMTSL3P82987 1691 aa18.76■□□□□ 0.59
SMARCA2-215ENST00000452193 AFAP1Q8N556 730 aa18.76■□□□□ 0.59
SMARCA2-215ENST00000452193 RICTORQ6R327 1708 aa18.76■□□□□ 0.59
SMARCA2-215ENST00000452193 ATP10AO60312 1499 aa18.76■□□□□ 0.59
SMARCA2-215ENST00000452193 YEATS2Q9ULM3 1422 aa18.75■□□□□ 0.59
SMARCA2-215ENST00000452193 FYCO1Q9BQS8 1478 aa18.75■□□□□ 0.59
SMARCA2-215ENST00000452193 MLECQ14165 292 aa18.74■□□□□ 0.59
SMARCA2-215ENST00000452193 BCORL1Q5H9F3 1711 aa18.73■□□□□ 0.59
SMARCA2-215ENST00000452193 C9orf84Q5VXU9 1444 aa18.73■□□□□ 0.59
SMARCA2-215ENST00000452193 MYO5CQ9NQX4 1742 aa18.71■□□□□ 0.59
SMARCA2-215ENST00000452193 ESF1Q9H501 851 aaKnown RBP18.69■□□□□ 0.58
SMARCA2-215ENST00000452193 ILDR1Q86SU0 546 aaPredicted RBP18.68■□□□□ 0.58
SMARCA2-215ENST00000452193 MADDQ8WXG6 1647 aa18.67■□□□□ 0.58
SMARCA2-215ENST00000452193 CFDP1Q9UEE9 299 aaPredicted RBP18.67■□□□□ 0.58
SMARCA2-215ENST00000452193 ZNF777Q9ULD5 760 aaPredicted RBP18.67■□□□□ 0.58
SMARCA2-215ENST00000452193 PCF11O94913 1555 aaKnown RBP18.67■□□□□ 0.58
SMARCA2-215ENST00000452193 MLH3Q9UHC1 1453 aa18.66■□□□□ 0.58
SMARCA2-215ENST00000452193 MTUS2Q5JR59 1369 aa18.66■□□□□ 0.58
SMARCA2-215ENST00000452193 CCNB3Q8WWL7 1395 aa18.64■□□□□ 0.57
SMARCA2-215ENST00000452193 KDM5CP41229 1560 aa18.62■□□□□ 0.57
SMARCA2-215ENST00000452193 SPAG9O60271 1321 aaKnown RBP18.61■□□□□ 0.57
SMARCA2-215ENST00000452193 PLEKHH2Q8IVE3 1493 aa18.6■□□□□ 0.57
SMARCA2-215ENST00000452193 KIAA1107Q9UPP5 1409 aa18.6■□□□□ 0.57
SMARCA2-215ENST00000452193 TRAPPC8Q9Y2L5 1435 aa18.6■□□□□ 0.57
SMARCA2-215ENST00000452193 GPATCH8Q9UKJ3 1502 aaKnown RBP18.59■□□□□ 0.57
SMARCA2-215ENST00000452193 ARHGEF12Q9NZN5 1544 aa18.59■□□□□ 0.57
SMARCA2-215ENST00000452193 LMTK3Q96Q04 1460 aa18.58■□□□□ 0.57
SMARCA2-215ENST00000452193 RIMS1Q86UR5 1692 aaKnown RBP18.58■□□□□ 0.57
SMARCA2-215ENST00000452193 HNRNPMP52272 730 aaKnown RBP eCLIP18.58■□□□□ 0.56
SMARCA2-215ENST00000452193 PREX2Q70Z35 1606 aa18.57■□□□□ 0.56
SMARCA2-215ENST00000452193 ABCC1P33527 1531 aa18.57■□□□□ 0.56
SMARCA2-215ENST00000452193 CEP162Q5TB80 1403 aa18.57■□□□□ 0.56
SMARCA2-215ENST00000452193 HSPA2P54652 639 aa18.56■□□□□ 0.56
SMARCA2-215ENST00000452193 DMRT2Q9Y5R5 561 aa18.56■□□□□ 0.56
SMARCA2-215ENST00000452193 REREQ9P2R6 1566 aa18.55■□□□□ 0.56
SMARCA2-215ENST00000452193 LRRIQ1Q96JM4 1722 aa18.55■□□□□ 0.56
SMARCA2-215ENST00000452193 CDC42BPBQ9Y5S2 1711 aa18.54■□□□□ 0.56
SMARCA2-215ENST00000452193 CEBPAP49715 358 aaPredicted RBP18.54■□□□□ 0.56
SMARCA2-215ENST00000452193 NCBP3Q53F19 620 aaKnown RBP18.54■□□□□ 0.56
SMARCA2-215ENST00000452193 RSPH4AQ5TD94 716 aa18.54■□□□□ 0.56
SMARCA2-215ENST00000452193 AGLP35573 1532 aa18.54■□□□□ 0.56
SMARCA2-215ENST00000452193 FBXO41Q8TF61 875 aa18.53■□□□□ 0.56
SMARCA2-215ENST00000452193 CNTLNQ9NXG0 1405 aa18.53■□□□□ 0.56
SMARCA2-215ENST00000452193 DIP2CQ9Y2E4 1556 aa18.51■□□□□ 0.55
SMARCA2-215ENST00000452193 UHRF1BP1Q6BDS2 1440 aa18.49■□□□□ 0.55
SMARCA2-215ENST00000452193 FER1L4A9Z1Z3 1794 aa18.48■□□□□ 0.55
SMARCA2-215ENST00000452193 CDC42BPAQ5VT25 1732 aa18.47■□□□□ 0.55
SMARCA2-215ENST00000452193 SIGLEC1Q9BZZ2 1709 aa18.47■□□□□ 0.55
SMARCA2-215ENST00000452193 EHBP1L1Q8N3D4 1523 aa18.47■□□□□ 0.55
SMARCA2-215ENST00000452193 ITSN2Q9NZM3 1697 aa18.47■□□□□ 0.55
SMARCA2-215ENST00000452193 SAMD9LQ8IVG5 1584 aa18.47■□□□□ 0.55
SMARCA2-215ENST00000452193 SYCP2Q9BX26 1530 aa18.46■□□□□ 0.55
SMARCA2-215ENST00000452193 ABCA6Q8N139 1617 aa18.45■□□□□ 0.54
SMARCA2-215ENST00000452193 LOC105371045A0A1W2PR82 267 aa18.44■□□□□ 0.54
SMARCA2-215ENST00000452193 TSPY4P0CV99 314 aa18.43■□□□□ 0.54
SMARCA2-215ENST00000452193 TSPY10P0CW01 314 aa18.43■□□□□ 0.54
SMARCA2-215ENST00000452193 ZNF644Q9H582 1327 aaPredicted RBP18.43■□□□□ 0.54
SMARCA2-215ENST00000452193 RTEL1-TNFRSF6BF6WH68 1400 aa18.42■□□□□ 0.54
SMARCA2-215ENST00000452193 A2MP01023 1474 aa18.42■□□□□ 0.54
SMARCA2-215ENST00000452193 GGT6Q6P531 493 aa18.42■□□□□ 0.54
SMARCA2-215ENST00000452193 ZMYM3Q14202 1370 aa18.42■□□□□ 0.54
SMARCA2-215ENST00000452193 KIDINS220Q9ULH0 1771 aa18.41■□□□□ 0.54
SMARCA2-215ENST00000452193 ATP7AQ04656 1500 aa18.41■□□□□ 0.54
SMARCA2-215ENST00000452193 APLP2Q06481 763 aa18.41■□□□□ 0.54
SMARCA2-215ENST00000452193 MSH5O43196 834 aa18.4■□□□□ 0.54
SMARCA2-215ENST00000452193 NPATQ14207 1427 aa18.4■□□□□ 0.54
SMARCA2-215ENST00000452193 VPS8Q8N3P4 1428 aa18.4■□□□□ 0.54
SMARCA2-215ENST00000452193 SETD1BQ9UPS6 1966 aaKnown RBP18.39■□□□□ 0.53
SMARCA2-215ENST00000452193 SLC4A1APQ9BWU0 796 aaKnown RBP18.39■□□□□ 0.53
SMARCA2-215ENST00000452193 MBD5Q9P267 1494 aa18.39■□□□□ 0.53
SMARCA2-215ENST00000452193 CERKQ8TCT0 537 aa18.38■□□□□ 0.53
SMARCA2-215ENST00000452193 NCOA2Q15596 1464 aa18.38■□□□□ 0.53
SMARCA2-215ENST00000452193 NPM3O75607 178 aaKnown RBP18.37■□□□□ 0.53
SMARCA2-215ENST00000452193 DHX29Q7Z478 1369 aaKnown RBP18.37■□□□□ 0.53
SMARCA2-215ENST00000452193 PREX1Q8TCU6 1659 aa18.37■□□□□ 0.53
SMARCA2-215ENST00000452193 TIAM1Q13009 1591 aa18.35■□□□□ 0.53
SMARCA2-215ENST00000452193 CCDC141Q6ZP82 1450 aa18.33■□□□□ 0.53
SMARCA2-215ENST00000452193 KIF3BO15066 747 aa18.33■□□□□ 0.52
SMARCA2-215ENST00000452193 INO80Q9ULG1 1556 aaPredicted RBP18.32■□□□□ 0.52
SMARCA2-215ENST00000452193 MAP3K1Q13233 1512 aa18.32■□□□□ 0.52
SMARCA2-215ENST00000452193 LRRC9Q6ZRR7 1453 aa18.32■□□□□ 0.52
SMARCA2-215ENST00000452193 SUPT6HQ7KZ85 1726 aaKnown RBP18.32■□□□□ 0.52
SMARCA2-215ENST00000452193 PTPRTO14522 1441 aa18.32■□□□□ 0.52
SMARCA2-215ENST00000452193 PLXNC1O60486 1568 aa18.3■□□□□ 0.52
SMARCA2-215ENST00000452193 WASHC2CQ9Y4E1 1318 aa18.29■□□□□ 0.52
SMARCA2-215ENST00000452193 PKD2Q13563 968 aa18.29■□□□□ 0.52
SMARCA2-215ENST00000452193 C3P01024 1663 aa18.28■□□□□ 0.52
SMARCA2-215ENST00000452193 CAMSAP2Q08AD1 1489 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms