RNA–Protein interactions for RNA: ENST00000452025.5

RPE-214, Transcript of ribulose-5-phosphate-3-epimerase, humanhuman

TSL 3 BASIC

Gene RPE, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPE-214ENST00000452025 EEA1Q15075 1411 aa18.21■□□□□ 0.51
RPE-214ENST00000452025 ARHGEF12Q9NZN5 1544 aa18.2■□□□□ 0.5
RPE-214ENST00000452025 MLECQ14165 292 aa18.2■□□□□ 0.5
RPE-214ENST00000452025 KIF14Q15058 1648 aa18.16■□□□□ 0.5
RPE-214ENST00000452025 C9orf84Q5VXU9 1444 aa18.16■□□□□ 0.5
RPE-214ENST00000452025 SCAPERQ9BY12 1400 aa18.16■□□□□ 0.5
RPE-214ENST00000452025 PLCH2O75038 1416 aa18.14■□□□□ 0.49
RPE-214ENST00000452025 CERKQ8TCT0 537 aa18.13■□□□□ 0.49
RPE-214ENST00000452025 ATP10AO60312 1499 aa18.13■□□□□ 0.49
RPE-214ENST00000452025 STRCQ7RTU9 1775 aa18.12■□□□□ 0.49
RPE-214ENST00000452025 KDM5CP41229 1560 aa18.1■□□□□ 0.49
RPE-214ENST00000452025 LRRIQ1Q96JM4 1722 aa18.09■□□□□ 0.49
RPE-214ENST00000452025 DIP2CQ9Y2E4 1556 aa18.09■□□□□ 0.49
RPE-214ENST00000452025 ARHGAP5Q13017 1502 aa18.09■□□□□ 0.49
RPE-214ENST00000452025 ABCA6Q8N139 1617 aa18.09■□□□□ 0.49
RPE-214ENST00000452025 ZNF518AQ6AHZ1 1483 aa18.08■□□□□ 0.49
RPE-214ENST00000452025 C3P01024 1663 aa18.07■□□□□ 0.48
RPE-214ENST00000452025 UHRF1BP1Q6BDS2 1440 aa18.06■□□□□ 0.48
RPE-214ENST00000452025 FMN1Q68DA7 1419 aa18.05■□□□□ 0.48
RPE-214ENST00000452025 CDC42BPBQ9Y5S2 1711 aa18.04■□□□□ 0.48
RPE-214ENST00000452025 CEBPAP49715 358 aaPredicted RBP18.04■□□□□ 0.48
RPE-214ENST00000452025 ATP1B4Q9UN42 357 aaPredicted RBP18.04■□□□□ 0.48
RPE-214ENST00000452025 REREQ9P2R6 1566 aa18.04■□□□□ 0.48
RPE-214ENST00000452025 ITSN2Q9NZM3 1697 aa18.03■□□□□ 0.48
RPE-214ENST00000452025 ARHGAP35Q9NRY4 1499 aa18.02■□□□□ 0.48
RPE-214ENST00000452025 PREX2Q70Z35 1606 aa18.02■□□□□ 0.48
RPE-214ENST00000452025 SPATA31D1Q6ZQQ2 1576 aa18.02■□□□□ 0.48
RPE-214ENST00000452025 SETD1BQ9UPS6 1966 aaKnown RBP18.01■□□□□ 0.47
RPE-214ENST00000452025 TROQ12816 1431 aaPredicted RBP18.01■□□□□ 0.47
RPE-214ENST00000452025 EFCAB2Q5VUJ9 269 aa18.01■□□□□ 0.47
RPE-214ENST00000452025 EHMT2Q96KQ7 1210 aa18.01■□□□□ 0.47
RPE-214ENST00000452025 DISP3Q9P2K9 1392 aa18.01■□□□□ 0.47
RPE-214ENST00000452025 CLIP1P30622 1438 aa18■□□□□ 0.47
RPE-214ENST00000452025 ABCC1P33527 1531 aa18■□□□□ 0.47
RPE-214ENST00000452025 MYT1LQ9UL68 1186 aa17.98■□□□□ 0.47
RPE-214ENST00000452025 KIDINS220Q9ULH0 1771 aa17.95■□□□□ 0.46
RPE-214ENST00000452025 AFAP1Q8N556 730 aa17.95■□□□□ 0.46
RPE-214ENST00000452025 CDK11AQ9UQ88 783 aaPredicted RBP17.95■□□□□ 0.46
RPE-214ENST00000452025 CDC42BPAQ5VT25 1732 aa17.95■□□□□ 0.46
RPE-214ENST00000452025 MLH3Q9UHC1 1453 aa17.94■□□□□ 0.46
RPE-214ENST00000452025 AGLP35573 1532 aa17.93■□□□□ 0.46
RPE-214ENST00000452025 UBTFP17480 764 aaKnown RBP17.93■□□□□ 0.46
RPE-214ENST00000452025 ILDR2Q71H61 639 aa17.93■□□□□ 0.46
RPE-214ENST00000452025 DMRT2Q9Y5R5 561 aa17.93■□□□□ 0.46
RPE-214ENST00000452025 PTPRTO14522 1441 aa17.92■□□□□ 0.46
RPE-214ENST00000452025 TRAPPC8Q9Y2L5 1435 aa17.92■□□□□ 0.46
RPE-214ENST00000452025 LTBP4Q8N2S1 1624 aa17.91■□□□□ 0.46
RPE-214ENST00000452025 MROH2AA6NES4 1674 aa17.91■□□□□ 0.46
RPE-214ENST00000452025 NCOA1Q15788 1441 aa17.89■□□□□ 0.45
RPE-214ENST00000452025 SUPT6HQ7KZ85 1726 aaKnown RBP17.88■□□□□ 0.45
RPE-214ENST00000452025 CCDC18Q5T9S5 1454 aa17.88■□□□□ 0.45
RPE-214ENST00000452025 ESF1Q9H501 851 aaKnown RBP17.87■□□□□ 0.45
RPE-214ENST00000452025 SAMD9LQ8IVG5 1584 aa17.87■□□□□ 0.45
RPE-214ENST00000452025 CAMSAP1Q5T5Y3 1602 aa17.87■□□□□ 0.45
RPE-214ENST00000452025 CNTLNQ9NXG0 1405 aa17.86■□□□□ 0.45
RPE-214ENST00000452025 SYCP2Q9BX26 1530 aa17.86■□□□□ 0.45
RPE-214ENST00000452025 MYO3AQ8NEV4 1616 aa17.86■□□□□ 0.45
RPE-214ENST00000452025 ZNF142P52746 1687 aaPredicted RBP17.86■□□□□ 0.45
RPE-214ENST00000452025 SOCS7O14512 581 aa17.85■□□□□ 0.45
RPE-214ENST00000452025 CLTCQ00610 1675 aaKnown RBP17.85■□□□□ 0.45
RPE-214ENST00000452025 IQSEC2Q5JU85 1478 aa17.85■□□□□ 0.45
RPE-214ENST00000452025 CASKIN1Q8WXD9 1431 aa17.81■□□□□ 0.44
RPE-214ENST00000452025 INO80Q9ULG1 1556 aaPredicted RBP17.81■□□□□ 0.44
RPE-214ENST00000452025 ATP7AQ04656 1500 aa17.8■□□□□ 0.44
RPE-214ENST00000452025 NPATQ14207 1427 aa17.8■□□□□ 0.44
RPE-214ENST00000452025 PLXNC1O60486 1568 aa17.79■□□□□ 0.44
RPE-214ENST00000452025 FYCO1Q9BQS8 1478 aa17.79■□□□□ 0.44
RPE-214ENST00000452025 CEP170BQ9Y4F5 1589 aaPredicted RBP17.78■□□□□ 0.44
RPE-214ENST00000452025 ZNF777Q9ULD5 760 aaPredicted RBP17.74■□□□□ 0.43
RPE-214ENST00000452025 PLA2R1Q13018 1463 aa17.73■□□□□ 0.43
RPE-214ENST00000452025 ADGBQ8N7X0 1667 aa17.73■□□□□ 0.43
RPE-214ENST00000452025 ZNF335Q9H4Z2 1342 aaPredicted RBP17.72■□□□□ 0.43
RPE-214ENST00000452025 GPATCH8Q9UKJ3 1502 aaKnown RBP17.72■□□□□ 0.43
RPE-214ENST00000452025 SPAG9O60271 1321 aaKnown RBP17.72■□□□□ 0.43
RPE-214ENST00000452025 NCKAP5LQ9HCH0 1330 aa17.72■□□□□ 0.43
RPE-214ENST00000452025 A2MP01023 1474 aa17.71■□□□□ 0.43
RPE-214ENST00000452025 ZMYM3Q14202 1370 aa17.71■□□□□ 0.43
RPE-214ENST00000452025 POLR1AO95602 1720 aaPredicted RBP17.71■□□□□ 0.43
RPE-214ENST00000452025 TCOF1Q13428 1488 aaKnown RBP17.69■□□□□ 0.42
RPE-214ENST00000452025 PTPRKQ15262 1439 aa17.69■□□□□ 0.42
RPE-214ENST00000452025 PLEKHH2Q8IVE3 1493 aa17.69■□□□□ 0.42
RPE-214ENST00000452025 UBAP1LF5GYI3 381 aa17.67■□□□□ 0.42
RPE-214ENST00000452025 HNRNPMP52272 730 aaKnown RBP eCLIP17.66■□□□□ 0.42
RPE-214ENST00000452025 TIAM1Q13009 1591 aa17.66■□□□□ 0.42
RPE-214ENST00000452025 DNMT1P26358 1616 aaKnown RBP17.65■□□□□ 0.42
RPE-214ENST00000452025 KIAA1107Q9UPP5 1409 aa17.64■□□□□ 0.42
RPE-214ENST00000452025 CCNB3Q8WWL7 1395 aa17.63■□□□□ 0.41
RPE-214ENST00000452025 A2ML1A8K2U0 1454 aa17.63■□□□□ 0.41
RPE-214ENST00000452025 MED1Q15648 1581 aaPredicted RBP17.62■□□□□ 0.41
RPE-214ENST00000452025 NEURL4Q96JN8 1562 aa17.62■□□□□ 0.41
RPE-214ENST00000452025 PKD2Q13563 968 aa17.62■□□□□ 0.41
RPE-214ENST00000452025 CHIC1Q5VXU3 224 aa17.62■□□□□ 0.41
RPE-214ENST00000452025 GGT6Q6P531 493 aa17.61■□□□□ 0.41
RPE-214ENST00000452025 PPP6R1Q9UPN7 881 aa17.61■□□□□ 0.41
RPE-214ENST00000452025 CFDP1Q9UEE9 299 aaPredicted RBP17.6■□□□□ 0.41
RPE-214ENST00000452025 EHBP1L1Q8N3D4 1523 aa17.6■□□□□ 0.41
RPE-214ENST00000452025 MTUS2Q5JR59 1369 aa17.59■□□□□ 0.41
RPE-214ENST00000452025 SCAF1Q9H7N4 1312 aaKnown RBP17.58■□□□□ 0.4
RPE-214ENST00000452025 KDM5DQ9BY66 1539 aa17.57■□□□□ 0.4
RPE-214ENST00000452025 CPS1P31327 1500 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms