RNA–Protein interactions for RNA: ENST00000451348.1

LINC01839-201, Transcript of long intergenic non-protein coding RNA 1839, humanhuman

TSL 3 BASIC

Gene LINC01839, Length 727 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01839-201ENST00000451348 EFCAB5A4FU69 1503 aa12.13□□□□□ -0.47
LINC01839-201ENST00000451348 RICTORQ6R327 1708 aa12.13□□□□□ -0.47
LINC01839-201ENST00000451348 DENND4BO75064 1496 aaPredicted RBP12.13□□□□□ -0.47
LINC01839-201ENST00000451348 ZFYVE16Q7Z3T8 1539 aa12.12□□□□□ -0.47
LINC01839-201ENST00000451348 IGF1RP08069 1367 aa12.12□□□□□ -0.47
LINC01839-201ENST00000451348 MAGI2Q86UL8 1455 aa12.12□□□□□ -0.47
LINC01839-201ENST00000451348 ALKQ9UM73 1620 aa12.11□□□□□ -0.47
LINC01839-201ENST00000451348 CAMSAP1Q5T5Y3 1602 aa12.09□□□□□ -0.47
LINC01839-201ENST00000451348 PTPRKQ15262 1439 aa12.09□□□□□ -0.47
LINC01839-201ENST00000451348 UGGT2Q9NYU1 1516 aa12.08□□□□□ -0.48
LINC01839-201ENST00000451348 TRAPPC8Q9Y2L5 1435 aa12.08□□□□□ -0.48
LINC01839-201ENST00000451348 CPS1P31327 1500 aa12.07□□□□□ -0.48
LINC01839-201ENST00000451348 ABCA8O94911 1581 aa12.06□□□□□ -0.48
LINC01839-201ENST00000451348 PLA2R1Q13018 1463 aa12.04□□□□□ -0.48
LINC01839-201ENST00000451348 PKD2Q13563 968 aa12.04□□□□□ -0.48
LINC01839-201ENST00000451348 NCKAP5LQ9HCH0 1330 aa12.04□□□□□ -0.48
LINC01839-201ENST00000451348 CARMIL1Q5VZK9 1371 aa12.04□□□□□ -0.48
LINC01839-201ENST00000451348 TCOF1Q13428 1488 aaKnown RBP12.03□□□□□ -0.48
LINC01839-201ENST00000451348 C3P01024 1663 aa12.02□□□□□ -0.49
LINC01839-201ENST00000451348 C9orf84Q5VXU9 1444 aa12.02□□□□□ -0.49
LINC01839-201ENST00000451348 ATP10AO60312 1499 aa12.01□□□□□ -0.49
LINC01839-201ENST00000451348 PPP6R1Q9UPN7 881 aa11.99□□□□□ -0.49
LINC01839-201ENST00000451348 RAPGEF2Q9Y4G8 1499 aa11.99□□□□□ -0.49
LINC01839-201ENST00000451348 HECW1Q76N89 1606 aa11.97□□□□□ -0.49
LINC01839-201ENST00000451348 SHANK2Q9UPX8 1470 aa11.95□□□□□ -0.5
LINC01839-201ENST00000451348 NPATQ14207 1427 aa11.95□□□□□ -0.5
LINC01839-201ENST00000451348 CFAP74Q9C0B2 1584 aa11.94□□□□□ -0.5
LINC01839-201ENST00000451348 ATP10BO94823 1461 aa11.94□□□□□ -0.5
LINC01839-201ENST00000451348 SENP3Q9H4L4 574 aaPredicted RBP11.92□□□□□ -0.5
LINC01839-201ENST00000451348 FAM9AQ8IZU1 332 aaPredicted RBP11.91□□□□□ -0.5
LINC01839-201ENST00000451348 ZNF142P52746 1687 aaPredicted RBP11.9□□□□□ -0.5
LINC01839-201ENST00000451348 CSRNP3Q8WYN3 585 aa11.89□□□□□ -0.51
LINC01839-201ENST00000451348 CNTLNQ9NXG0 1405 aa11.88□□□□□ -0.51
LINC01839-201ENST00000451348 AGLP35573 1532 aa11.88□□□□□ -0.51
LINC01839-201ENST00000451348 LRRC7Q96NW7 1537 aa11.87□□□□□ -0.51
LINC01839-201ENST00000451348 RNF17Q9BXT8 1623 aaKnown RBP11.87□□□□□ -0.51
LINC01839-201ENST00000451348 REREQ9P2R6 1566 aa11.86□□□□□ -0.51
LINC01839-201ENST00000451348 SETBP1Q9Y6X0 1596 aa11.86□□□□□ -0.51
LINC01839-201ENST00000451348 VWDEQ8N2E2 1590 aa11.85□□□□□ -0.51
LINC01839-201ENST00000451348 CEP170BQ9Y4F5 1589 aaPredicted RBP11.85□□□□□ -0.51
LINC01839-201ENST00000451348 CDK12Q9NYV4 1490 aaPredicted RBP11.85□□□□□ -0.51
LINC01839-201ENST00000451348 GOLGA3Q08378 1498 aa11.84□□□□□ -0.51
LINC01839-201ENST00000451348 FOXD1Q16676 465 aa11.84□□□□□ -0.51
LINC01839-201ENST00000451348 RBM33Q96EV2 1170 aaKnown RBP11.84□□□□□ -0.51
LINC01839-201ENST00000451348 ZRANB1Q9UGI0 708 aa11.84□□□□□ -0.51
LINC01839-201ENST00000451348 ESF1Q9H501 851 aaKnown RBP11.83□□□□□ -0.52
LINC01839-201ENST00000451348 MYO3AQ8NEV4 1616 aa11.82□□□□□ -0.52
LINC01839-201ENST00000451348 TRIM52Q96A61 297 aa11.82□□□□□ -0.52
LINC01839-201ENST00000451348 SCAPERQ9BY12 1400 aa11.82□□□□□ -0.52
LINC01839-201ENST00000451348 NEURL4Q96JN8 1562 aa11.81□□□□□ -0.52
LINC01839-201ENST00000451348 ARID3CA6NKF2 412 aa11.8□□□□□ -0.52
LINC01839-201ENST00000451348 PRXQ9BXM0 1461 aa11.8□□□□□ -0.52
LINC01839-201ENST00000451348 EEA1Q15075 1411 aa11.79□□□□□ -0.52
LINC01839-201ENST00000451348 FAM135BQ49AJ0 1406 aa11.79□□□□□ -0.52
LINC01839-201ENST00000451348 MROH2AA6NES4 1674 aa11.79□□□□□ -0.52
LINC01839-201ENST00000451348 SUPT6HQ7KZ85 1726 aaKnown RBP11.79□□□□□ -0.52
LINC01839-201ENST00000451348 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.78□□□□□ -0.52
LINC01839-201ENST00000451348 ZNF772Q68DY9 489 aaPredicted RBP11.78□□□□□ -0.52
LINC01839-201ENST00000451348 SYNMO15061 1565 aa11.78□□□□□ -0.52
LINC01839-201ENST00000451348 CHIC1Q5VXU3 224 aa11.77□□□□□ -0.53
LINC01839-201ENST00000451348 DIP2CQ9Y2E4 1556 aa11.76□□□□□ -0.53
LINC01839-201ENST00000451348 POLR1AO95602 1720 aaPredicted RBP11.75□□□□□ -0.53
LINC01839-201ENST00000451348 ZMYM3Q14202 1370 aa11.75□□□□□ -0.53
LINC01839-201ENST00000451348 LRP5O75197 1615 aa11.75□□□□□ -0.53
LINC01839-201ENST00000451348 KDM5CP41229 1560 aa11.74□□□□□ -0.53
LINC01839-201ENST00000451348 A2ML1A8K2U0 1454 aa11.73□□□□□ -0.53
LINC01839-201ENST00000451348 RXRBP28702 533 aa11.73□□□□□ -0.53
LINC01839-201ENST00000451348 ZNF518AQ6AHZ1 1483 aa11.73□□□□□ -0.53
LINC01839-201ENST00000451348 DNMT1P26358 1616 aaKnown RBP11.71□□□□□ -0.53
LINC01839-201ENST00000451348 CDK13Q14004 1512 aaKnown RBP11.71□□□□□ -0.53
LINC01839-201ENST00000451348 MED14O60244 1454 aa11.7□□□□□ -0.54
LINC01839-201ENST00000451348 P3H3Q8IVL6 736 aa11.7□□□□□ -0.54
LINC01839-201ENST00000451348 JCADQ9P266 1359 aa11.69□□□□□ -0.54
LINC01839-201ENST00000451348 STRCP1A6NGW2 1772 aa11.69□□□□□ -0.54
LINC01839-201ENST00000451348 PLCH2O75038 1416 aa11.69□□□□□ -0.54
LINC01839-201ENST00000451348 ABCA6Q8N139 1617 aa11.68□□□□□ -0.54
LINC01839-201ENST00000451348 UBTFP17480 764 aaKnown RBP11.68□□□□□ -0.54
LINC01839-201ENST00000451348 RAPGEF6Q8TEU7 1601 aa11.68□□□□□ -0.54
LINC01839-201ENST00000451348 LRP6O75581 1613 aa11.67□□□□□ -0.54
LINC01839-201ENST00000451348 MLH3Q9UHC1 1453 aa11.66□□□□□ -0.54
LINC01839-201ENST00000451348 YY1P25490 414 aa11.66□□□□□ -0.54
LINC01839-201ENST00000451348 NPHP4O75161 1426 aaPredicted RBP11.66□□□□□ -0.54
LINC01839-201ENST00000451348 DEPDC5O75140 1603 aa11.65□□□□□ -0.54
LINC01839-201ENST00000451348 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.65□□□□□ -0.54
LINC01839-201ENST00000451348 RANGAP1P46060 587 aaPredicted RBP11.65□□□□□ -0.54
LINC01839-201ENST00000451348 HNRNPUL2Q1KMD3 747 aaKnown RBP11.65□□□□□ -0.54
LINC01839-201ENST00000451348 RGS12O14924 1447 aa11.65□□□□□ -0.54
LINC01839-201ENST00000451348 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.65□□□□□ -0.55
LINC01839-201ENST00000451348 NUP153P49790 1475 aaKnown RBP11.64□□□□□ -0.55
LINC01839-201ENST00000451348 ANKLE2Q86XL3 938 aa11.64□□□□□ -0.55
LINC01839-201ENST00000451348 SPATA31A6Q5VVP1 1343 aa11.63□□□□□ -0.55
LINC01839-201ENST00000451348 CTTNBP2Q8WZ74 1663 aa11.63□□□□□ -0.55
LINC01839-201ENST00000451348 ROBO1Q9Y6N7 1651 aa11.63□□□□□ -0.55
LINC01839-201ENST00000451348 PLEKHD1A6NEE1 506 aa11.63□□□□□ -0.55
LINC01839-201ENST00000451348 AFAP1Q8N556 730 aa11.63□□□□□ -0.55
LINC01839-201ENST00000451348 ATAD2Q6PL18 1390 aa11.63□□□□□ -0.55
LINC01839-201ENST00000451348 EFCAB2Q5VUJ9 269 aa11.6□□□□□ -0.55
LINC01839-201ENST00000451348 IQGAP1P46940 1657 aa11.59□□□□□ -0.55
LINC01839-201ENST00000451348 NHSL1Q5SYE7 1610 aa11.59□□□□□ -0.55
LINC01839-201ENST00000451348 KDM5DQ9BY66 1539 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms