RNA–Protein interactions for RNA: ENST00000450649.6

SCUBE2-202, Transcript of signal peptide, CUB domain and EGF like domain containing 2, humanhuman

TSL 1 (best) BASIC

Gene SCUBE2, Length 2,912 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE2-202ENST00000450649 PDS5BQ9NTI5 1447 aa23.38■■□□□ 1.33
SCUBE2-202ENST00000450649 ANO8Q9HCE9 1232 aaPredicted RBP23.37■■□□□ 1.33
SCUBE2-202ENST00000450649 IPO9Q96P70 1041 aaKnown RBP23.36■■□□□ 1.33
SCUBE2-202ENST00000450649 ANP32AP39687 249 aaKnown RBP23.35■■□□□ 1.33
SCUBE2-202ENST00000450649 MIA2Q96PC5 1412 aa23.35■■□□□ 1.33
SCUBE2-202ENST00000450649 RTL5Q5HYW3 569 aaPredicted RBP23.34■■□□□ 1.33
SCUBE2-202ENST00000450649 CHIC2Q9UKJ5 165 aa23.33■■□□□ 1.33
SCUBE2-202ENST00000450649 C11orf95C9JLR9 678 aaPredicted RBP23.32■■□□□ 1.32
SCUBE2-202ENST00000450649 EPRSP07814 1512 aaKnown RBP23.31■■□□□ 1.32
SCUBE2-202ENST00000450649 TARBP1Q13395 1621 aaKnown RBP23.31■■□□□ 1.32
SCUBE2-202ENST00000450649 ZBTB47Q9UFB7 747 aaPredicted RBP23.3■■□□□ 1.32
SCUBE2-202ENST00000450649 CCDC7Q96M83 1385 aa23.3■■□□□ 1.32
SCUBE2-202ENST00000450649 MPHOSPH9Q99550 1183 aa23.29■■□□□ 1.32
SCUBE2-202ENST00000450649 KDM6BO15054 1643 aa23.29■■□□□ 1.32
SCUBE2-202ENST00000450649 NCOA1Q15788 1441 aa23.28■■□□□ 1.32
SCUBE2-202ENST00000450649 CCDC136Q96JN2 1154 aa23.27■■□□□ 1.32
SCUBE2-202ENST00000450649 IQGAP2Q13576 1575 aa23.26■■□□□ 1.31
SCUBE2-202ENST00000450649 SMG6Q86US8 1419 aaKnown RBP23.25■■□□□ 1.31
SCUBE2-202ENST00000450649 L3MBTL2Q969R5 705 aa23.24■■□□□ 1.31
SCUBE2-202ENST00000450649 SALL2Q9Y467 1007 aaPredicted RBP23.23■■□□□ 1.31
SCUBE2-202ENST00000450649 WDR62O43379 1518 aa23.22■■□□□ 1.31
SCUBE2-202ENST00000450649 CDK13Q14004 1512 aaKnown RBP23.22■■□□□ 1.31
SCUBE2-202ENST00000450649 ROCK1Q13464 1354 aa23.2■■□□□ 1.31
SCUBE2-202ENST00000450649 RNF123Q5XPI4 1314 aa23.2■■□□□ 1.3
SCUBE2-202ENST00000450649 PBRM1Q86U86 1689 aa23.2■■□□□ 1.3
SCUBE2-202ENST00000450649 IL27Q8NEV9 243 aa23.19■■□□□ 1.3
SCUBE2-202ENST00000450649 NUDCQ9Y266 331 aa23.19■■□□□ 1.3
SCUBE2-202ENST00000450649 ANKRD30BQ9BXX2 1392 aa23.18■■□□□ 1.3
SCUBE2-202ENST00000450649 ADAMTS12P58397 1594 aa23.17■■□□□ 1.3
SCUBE2-202ENST00000450649 RPRD2Q5VT52 1461 aaKnown RBP23.17■■□□□ 1.3
SCUBE2-202ENST00000450649 DAPK1P53355 1430 aa23.15■■□□□ 1.3
SCUBE2-202ENST00000450649 KIF7Q2M1P5 1343 aa23.15■■□□□ 1.3
SCUBE2-202ENST00000450649 FOXD1Q16676 465 aa23.14■■□□□ 1.29
SCUBE2-202ENST00000450649 TEX14Q8IWB6 1497 aa23.13■■□□□ 1.29
SCUBE2-202ENST00000450649 ABCC5O15440 1437 aa23.11■■□□□ 1.29
SCUBE2-202ENST00000450649 NBPF8Q3BBV2 869 aa23.11■■□□□ 1.29
SCUBE2-202ENST00000450649 DNMT1P26358 1616 aaKnown RBP23.11■■□□□ 1.29
SCUBE2-202ENST00000450649 RTN4Q9NQC3 1192 aaKnown RBP23.1■■□□□ 1.29
SCUBE2-202ENST00000450649 SPATA31E1Q6ZUB1 1445 aa23.1■■□□□ 1.29
SCUBE2-202ENST00000450649 ARID3CA6NKF2 412 aa23.06■■□□□ 1.28
SCUBE2-202ENST00000450649 NPM2Q86SE8 214 aaKnown RBP23.05■■□□□ 1.28
SCUBE2-202ENST00000450649 DNAJC5BQ9UF47 199 aa23.05■■□□□ 1.28
SCUBE2-202ENST00000450649 CNGB1Q14028 1251 aaPredicted RBP23.05■■□□□ 1.28
SCUBE2-202ENST00000450649 SLC4A1APQ9BWU0 796 aaKnown RBP23.04■■□□□ 1.28
SCUBE2-202ENST00000450649 POLR1AO95602 1720 aaPredicted RBP23.03■■□□□ 1.28
SCUBE2-202ENST00000450649 SENP3-EIF4A1A0A087X0R7 540 aa23.03■■□□□ 1.28
SCUBE2-202ENST00000450649 NEFMP07197 916 aa23.02■■□□□ 1.28
SCUBE2-202ENST00000450649 LAS1LQ9Y4W2 734 aaKnown RBP23.02■■□□□ 1.28
SCUBE2-202ENST00000450649 NUP153P49790 1475 aaKnown RBP23.01■■□□□ 1.27
SCUBE2-202ENST00000450649 KIAA0556O60303 1618 aa23.01■■□□□ 1.27
SCUBE2-202ENST00000450649 DISP1Q96F81 1524 aa23.01■■□□□ 1.27
SCUBE2-202ENST00000450649 KIAA0586Q9BVV6 1533 aa23.01■■□□□ 1.27
SCUBE2-202ENST00000450649 DHX29Q7Z478 1369 aaKnown RBP23.01■■□□□ 1.27
SCUBE2-202ENST00000450649 ZNF644Q9H582 1327 aaPredicted RBP23.01■■□□□ 1.27
SCUBE2-202ENST00000450649 USP35Q9P2H5 1018 aa23.01■■□□□ 1.27
SCUBE2-202ENST00000450649 MRC2Q9UBG0 1479 aa22.98■■□□□ 1.27
SCUBE2-202ENST00000450649 PZPP20742 1482 aa22.97■■□□□ 1.27
SCUBE2-202ENST00000450649 RAPGEF6Q8TEU7 1601 aa22.96■■□□□ 1.27
SCUBE2-202ENST00000450649 TCERG1O14776 1098 aaKnown RBP22.96■■□□□ 1.27
SCUBE2-202ENST00000450649 PDE4AP27815 886 aa22.94■■□□□ 1.26
SCUBE2-202ENST00000450649 WASHC2CQ9Y4E1 1318 aa22.94■■□□□ 1.26
SCUBE2-202ENST00000450649 PNISRQ8TF01 805 aaKnown RBP22.93■■□□□ 1.26
SCUBE2-202ENST00000450649 MBD5Q9P267 1494 aa22.93■■□□□ 1.26
SCUBE2-202ENST00000450649 ZBTB4Q9P1Z0 1013 aaPredicted RBP22.92■■□□□ 1.26
SCUBE2-202ENST00000450649 IFT140Q96RY7 1462 aa22.92■■□□□ 1.26
SCUBE2-202ENST00000450649 POLR3GLQ9BT43 218 aa22.92■■□□□ 1.26
SCUBE2-202ENST00000450649 TROQ12816 1431 aaPredicted RBP22.91■■□□□ 1.26
SCUBE2-202ENST00000450649 EXOC6Q8TAG9 804 aa22.91■■□□□ 1.26
SCUBE2-202ENST00000450649 PPM1GO15355 546 aaPredicted RBP22.9■■□□□ 1.26
SCUBE2-202ENST00000450649 CAMSAP2Q08AD1 1489 aa22.9■■□□□ 1.26
SCUBE2-202ENST00000450649 BACH2Q9BYV9 841 aa22.9■■□□□ 1.26
SCUBE2-202ENST00000450649 RRP1P56182 461 aaKnown RBP22.89■■□□□ 1.26
SCUBE2-202ENST00000450649 KIAA1107Q9UPP5 1409 aa22.89■■□□□ 1.25
SCUBE2-202ENST00000450649 ZNF608Q9ULD9 1512 aaPredicted RBP22.89■■□□□ 1.25
SCUBE2-202ENST00000450649 TMC1Q8TDI8 760 aa22.88■■□□□ 1.25
SCUBE2-202ENST00000450649 ADGRL2O95490 1459 aa22.88■■□□□ 1.25
SCUBE2-202ENST00000450649 CFDP1Q9UEE9 299 aaPredicted RBP22.87■■□□□ 1.25
SCUBE2-202ENST00000450649 ARID4BQ4LE39 1312 aaPredicted RBP22.87■■□□□ 1.25
SCUBE2-202ENST00000450649 ADGBQ8N7X0 1667 aa22.87■■□□□ 1.25
SCUBE2-202ENST00000450649 PRG4Q92954 1404 aaPredicted RBP22.87■■□□□ 1.25
SCUBE2-202ENST00000450649 ITSN2Q9NZM3 1697 aa22.86■■□□□ 1.25
SCUBE2-202ENST00000450649 USP47Q96K76 1375 aa22.85■■□□□ 1.25
SCUBE2-202ENST00000450649 GRIN2AQ12879 1464 aa22.85■■□□□ 1.25
SCUBE2-202ENST00000450649 GPATCH8Q9UKJ3 1502 aaKnown RBP22.85■■□□□ 1.25
SCUBE2-202ENST00000450649 MS4A1P11836 297 aa22.85■■□□□ 1.25
SCUBE2-202ENST00000450649 BCORL1Q5H9F3 1711 aa22.83■■□□□ 1.24
SCUBE2-202ENST00000450649 KIF14Q15058 1648 aa22.82■■□□□ 1.24
SCUBE2-202ENST00000450649 ANKRD30AQ9BXX3 1397 aa22.8■■□□□ 1.24
SCUBE2-202ENST00000450649 ADCY10Q96PN6 1610 aa22.8■■□□□ 1.24
SCUBE2-202ENST00000450649 RCAN3Q9UKA8 241 aa22.8■■□□□ 1.24
SCUBE2-202ENST00000450649 BRPF3Q9ULD4 1205 aa22.8■■□□□ 1.24
SCUBE2-202ENST00000450649 CROCC2H7BZ55 1655 aa22.8■■□□□ 1.24
SCUBE2-202ENST00000450649 PKD2Q13563 968 aa22.8■■□□□ 1.24
SCUBE2-202ENST00000450649 KDM5CP41229 1560 aa22.79■■□□□ 1.24
SCUBE2-202ENST00000450649 LRPPRCP42704 1394 aaKnown RBP22.79■■□□□ 1.24
SCUBE2-202ENST00000450649 UHRF1BP1Q6BDS2 1440 aa22.78■■□□□ 1.24
SCUBE2-202ENST00000450649 ROCK2O75116 1388 aaKnown RBP22.77■■□□□ 1.24
SCUBE2-202ENST00000450649 GSE1Q14687 1217 aa22.77■■□□□ 1.24
SCUBE2-202ENST00000450649 ANKRD50Q9ULJ7 1429 aa22.76■■□□□ 1.23
SCUBE2-202ENST00000450649 PLB1Q6P1J6 1458 aa22.75■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms