RNA–Protein interactions for RNA: ENST00000450501.5

COPS7B-215, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 4

Gene COPS7B, Length 559 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-215ENST00000450501 PREX2Q70Z35 1606 aa29.57■■■□□ 2.32
COPS7B-215ENST00000450501 CDC42BPAQ5VT25 1732 aa29.57■■■□□ 2.32
COPS7B-215ENST00000450501 CDC42BPBQ9Y5S2 1711 aa29.57■■■□□ 2.32
COPS7B-215ENST00000450501 APLP2Q06481 763 aa29.56■■■□□ 2.32
COPS7B-215ENST00000450501 LRRC9Q6ZRR7 1453 aa29.53■■■□□ 2.32
COPS7B-215ENST00000450501 SUPT6HQ7KZ85 1726 aaKnown RBP29.52■■■□□ 2.32
COPS7B-215ENST00000450501 CCNB3Q8WWL7 1395 aa29.52■■■□□ 2.32
COPS7B-215ENST00000450501 ADGRL1O94910 1474 aa29.51■■■□□ 2.31
COPS7B-215ENST00000450501 DENND4BO75064 1496 aaPredicted RBP29.5■■■□□ 2.31
COPS7B-215ENST00000450501 GPATCH8Q9UKJ3 1502 aaKnown RBP29.49■■■□□ 2.31
COPS7B-215ENST00000450501 RAPGEF3O95398 923 aa29.48■■■□□ 2.31
COPS7B-215ENST00000450501 RICTORQ6R327 1708 aa29.46■■■□□ 2.31
COPS7B-215ENST00000450501 SCAPERQ9BY12 1400 aa29.45■■■□□ 2.31
COPS7B-215ENST00000450501 FRMPD1Q5SYB0 1578 aa29.45■■■□□ 2.31
COPS7B-215ENST00000450501 NCOA2Q15596 1464 aa29.45■■■□□ 2.31
COPS7B-215ENST00000450501 ITSN2Q9NZM3 1697 aa29.44■■■□□ 2.3
COPS7B-215ENST00000450501 KANK4Q5T7N3 995 aaPredicted RBP29.44■■■□□ 2.3
COPS7B-215ENST00000450501 CFDP1Q9UEE9 299 aaPredicted RBP29.41■■■□□ 2.3
COPS7B-215ENST00000450501 POGZQ7Z3K3 1410 aa29.39■■■□□ 2.3
COPS7B-215ENST00000450501 ZNF777Q9ULD5 760 aaPredicted RBP29.38■■■□□ 2.29
COPS7B-215ENST00000450501 ABCC1P33527 1531 aa29.38■■■□□ 2.29
COPS7B-215ENST00000450501 ZMYM4Q5VZL5 1548 aa29.35■■■□□ 2.29
COPS7B-215ENST00000450501 SAMD9LQ8IVG5 1584 aa29.35■■■□□ 2.29
COPS7B-215ENST00000450501 ZNF518AQ6AHZ1 1483 aa29.35■■■□□ 2.29
COPS7B-215ENST00000450501 PLEKHH2Q8IVE3 1493 aa29.32■■■□□ 2.28
COPS7B-215ENST00000450501 MAGI2Q86UL8 1455 aa29.3■■■□□ 2.28
COPS7B-215ENST00000450501 ARHGEF12Q9NZN5 1544 aa29.3■■■□□ 2.28
COPS7B-215ENST00000450501 KIAA1107Q9UPP5 1409 aa29.28■■■□□ 2.28
COPS7B-215ENST00000450501 KDM5CP41229 1560 aa29.28■■■□□ 2.28
COPS7B-215ENST00000450501 SYCP2Q9BX26 1530 aa29.28■■■□□ 2.28
COPS7B-215ENST00000450501 AFAP1Q8N556 730 aa29.27■■■□□ 2.28
COPS7B-215ENST00000450501 ARHGEF40Q8TER5 1519 aa29.26■■■□□ 2.27
COPS7B-215ENST00000450501 TRAPPC8Q9Y2L5 1435 aa29.26■■■□□ 2.27
COPS7B-215ENST00000450501 ZFYVE16Q7Z3T8 1539 aa29.25■■■□□ 2.27
COPS7B-215ENST00000450501 MYOM3Q5VTT5 1437 aa29.24■■■□□ 2.27
COPS7B-215ENST00000450501 ZNF644Q9H582 1327 aaPredicted RBP29.22■■■□□ 2.27
COPS7B-215ENST00000450501 HNRNPMP52272 730 aaKnown RBP eCLIP29.22■■■□□ 2.274e-7■■■■□ 20.7
COPS7B-215ENST00000450501 HECW2Q9P2P5 1572 aa29.22■■■□□ 2.27
COPS7B-215ENST00000450501 CAMSAP2Q08AD1 1489 aa29.2■■■□□ 2.26
COPS7B-215ENST00000450501 MIA2Q96PC5 1412 aa29.2■■■□□ 2.26
COPS7B-215ENST00000450501 YEATS2Q9ULM3 1422 aa29.2■■■□□ 2.26
COPS7B-215ENST00000450501 MYT1LQ9UL68 1186 aa29.19■■■□□ 2.26
COPS7B-215ENST00000450501 MLH3Q9UHC1 1453 aa29.18■■■□□ 2.26
COPS7B-215ENST00000450501 MBD5Q9P267 1494 aa29.15■■■□□ 2.26
COPS7B-215ENST00000450501 SPAG9O60271 1321 aaKnown RBP29.13■■■□□ 2.25
COPS7B-215ENST00000450501 ATP10AO60312 1499 aa29.12■■■□□ 2.25
COPS7B-215ENST00000450501 KIDINS220Q9ULH0 1771 aa29.11■■■□□ 2.25
COPS7B-215ENST00000450501 RSPH4AQ5TD94 716 aa29.11■■■□□ 2.25
COPS7B-215ENST00000450501 C9orf84Q5VXU9 1444 aa29.09■■■□□ 2.25
COPS7B-215ENST00000450501 ARHGEF5Q12774 1597 aa29.09■■■□□ 2.25
COPS7B-215ENST00000450501 DIP2CQ9Y2E4 1556 aa29.09■■■□□ 2.25
COPS7B-215ENST00000450501 KDM4FA0A1W2PPD8 638 aa29.08■■■□□ 2.25
COPS7B-215ENST00000450501 ARID4BQ4LE39 1312 aaPredicted RBP29.08■■■□□ 2.25
COPS7B-215ENST00000450501 FGD6Q6ZV73 1430 aa29.08■■■□□ 2.25
COPS7B-215ENST00000450501 CCDC141Q6ZP82 1450 aa29.08■■■□□ 2.25
COPS7B-215ENST00000450501 ABCA6Q8N139 1617 aa29.08■■■□□ 2.25
COPS7B-215ENST00000450501 ATP7AQ04656 1500 aa29.07■■■□□ 2.24
COPS7B-215ENST00000450501 PTPN23Q9H3S7 1636 aa29.06■■■□□ 2.24
COPS7B-215ENST00000450501 INO80Q9ULG1 1556 aaPredicted RBP29.06■■■□□ 2.24
COPS7B-215ENST00000450501 REREQ9P2R6 1566 aa29.02■■■□□ 2.24
COPS7B-215ENST00000450501 SIGLEC1Q9BZZ2 1709 aa29.01■■■□□ 2.23
COPS7B-215ENST00000450501 RTEL1-TNFRSF6BF6WH68 1400 aa29.01■■■□□ 2.23
COPS7B-215ENST00000450501 BCORL1Q5H9F3 1711 aa29■■■□□ 2.23
COPS7B-215ENST00000450501 PPARGC1BQ86YN6 1023 aaKnown RBP29■■■□□ 2.23
COPS7B-215ENST00000450501 TCOF1Q13428 1488 aaKnown RBP28.99■■■□□ 2.23
COPS7B-215ENST00000450501 TSPY4P0CV99 314 aa28.99■■■□□ 2.23
COPS7B-215ENST00000450501 TSPY10P0CW01 314 aa28.99■■■□□ 2.23
COPS7B-215ENST00000450501 ADAMTSL3P82987 1691 aa28.95■■■□□ 2.22
COPS7B-215ENST00000450501 ADGBQ8N7X0 1667 aa28.95■■■□□ 2.22
COPS7B-215ENST00000450501 AGLP35573 1532 aa28.92■■■□□ 2.22
COPS7B-215ENST00000450501 MAST1Q9Y2H9 1570 aa28.92■■■□□ 2.22
COPS7B-215ENST00000450501 A2MP01023 1474 aa28.91■■■□□ 2.22
COPS7B-215ENST00000450501 DNMT1P26358 1616 aaKnown RBP28.9■■■□□ 2.22
COPS7B-215ENST00000450501 CROCC2H7BZ55 1655 aa28.89■■■□□ 2.21
COPS7B-215ENST00000450501 MLECQ14165 292 aa28.88■■■□□ 2.21
COPS7B-215ENST00000450501 FAM50AQ14320 339 aaKnown RBP28.88■■■□□ 2.21
COPS7B-215ENST00000450501 MADDQ8WXG6 1647 aa28.87■■■□□ 2.21
COPS7B-215ENST00000450501 ABCC5O15440 1437 aa28.87■■■□□ 2.21
COPS7B-215ENST00000450501 PLXNC1O60486 1568 aa28.87■■■□□ 2.21
COPS7B-215ENST00000450501 DAPK1P53355 1430 aa28.86■■■□□ 2.21
COPS7B-215ENST00000450501 SHANK2Q9UPX8 1470 aa28.86■■■□□ 2.21
COPS7B-215ENST00000450501 DHX29Q7Z478 1369 aaKnown RBP28.83■■■□□ 2.21
COPS7B-215ENST00000450501 FER1L4A9Z1Z3 1794 aa28.82■■■□□ 2.2
COPS7B-215ENST00000450501 RIMS1Q86UR5 1692 aaKnown RBP28.8■■■□□ 2.2
COPS7B-215ENST00000450501 PTPRMP28827 1452 aa28.78■■■□□ 2.2
COPS7B-215ENST00000450501 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP28.75■■■□□ 2.19
COPS7B-215ENST00000450501 ESF1Q9H501 851 aaKnown RBP28.72■■■□□ 2.19
COPS7B-215ENST00000450501 CHIC2Q9UKJ5 165 aa28.72■■■□□ 2.19
COPS7B-215ENST00000450501 ANKRD30AQ9BXX3 1397 aa28.72■■■□□ 2.19
COPS7B-215ENST00000450501 RRBP1Q9P2E9 1410 aaKnown RBP28.71■■■□□ 2.19
COPS7B-215ENST00000450501 DUOX2Q9NRD8 1548 aa28.71■■■□□ 2.19
COPS7B-215ENST00000450501 KIF15Q9NS87 1388 aa28.71■■■□□ 2.19
COPS7B-215ENST00000450501 KIF3BO15066 747 aa28.7■■■□□ 2.18
COPS7B-215ENST00000450501 GGT6Q6P531 493 aa28.69■■■□□ 2.18
COPS7B-215ENST00000450501 ADGRL2O95490 1459 aa28.68■■■□□ 2.18
COPS7B-215ENST00000450501 RRP7BPQ9NSQ0 103 aa28.68■■■□□ 2.18
COPS7B-215ENST00000450501 EIF2AK4Q9P2K8 1649 aaKnown RBP28.67■■■□□ 2.18
COPS7B-215ENST00000450501 NCOA1Q15788 1441 aa28.67■■■□□ 2.18
COPS7B-215ENST00000450501 CNTLNQ9NXG0 1405 aa28.67■■■□□ 2.18
COPS7B-215ENST00000450501 PPP6R1Q9UPN7 881 aa28.66■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms