RNA–Protein interactions for RNA: ENST00000450198.6

SMARCA2-214, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 1 (best) BASIC

Gene SMARCA2, Length 5,602 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-214ENST00000450198 FRAT2O75474 233 aaPredicted RBP18.41■□□□□ 0.54
SMARCA2-214ENST00000450198 BAZ1BQ9UIG0 1483 aaKnown RBP18.41■□□□□ 0.54
SMARCA2-214ENST00000450198 NBR1Q14596 966 aa18.41■□□□□ 0.54
SMARCA2-214ENST00000450198 FOXD1Q16676 465 aa18.41■□□□□ 0.54
SMARCA2-214ENST00000450198 HSP90AB1P08238 724 aaKnown RBP18.41■□□□□ 0.54
SMARCA2-214ENST00000450198 CCDC34Q96HJ3 373 aa18.4■□□□□ 0.54
SMARCA2-214ENST00000450198 CARMIL2Q6F5E8 1435 aa18.39■□□□□ 0.53
SMARCA2-214ENST00000450198 SPAG9O60271 1321 aaKnown RBP18.39■□□□□ 0.53
SMARCA2-214ENST00000450198 HIRIP3Q9BW71 556 aaPredicted RBP18.38■□□□□ 0.53
SMARCA2-214ENST00000450198 CHMP3Q9Y3E7 222 aa18.38■□□□□ 0.53
SMARCA2-214ENST00000450198 NGDNQ8NEJ9 315 aaKnown RBP18.38■□□□□ 0.53
SMARCA2-214ENST00000450198 EFCAB2Q5VUJ9 269 aa18.36■□□□□ 0.53
SMARCA2-214ENST00000450198 CC2D1BQ5T0F9 858 aaKnown RBP18.36■□□□□ 0.53
SMARCA2-214ENST00000450198 EVA1CP58658 441 aa18.36■□□□□ 0.53
SMARCA2-214ENST00000450198 CTDP1Q9Y5B0 961 aaPredicted RBP18.35■□□□□ 0.53
SMARCA2-214ENST00000450198 IPO8O15397 1037 aaKnown RBP18.35■□□□□ 0.53
SMARCA2-214ENST00000450198 STK31Q9BXU1 1019 aa18.34■□□□□ 0.53
SMARCA2-214ENST00000450198 EEA1Q15075 1411 aa18.34■□□□□ 0.53
SMARCA2-214ENST00000450198 CWC22Q9HCG8 908 aaKnown RBP18.34■□□□□ 0.53
SMARCA2-214ENST00000450198 DCAF11Q8TEB1 546 aa18.34■□□□□ 0.53
SMARCA2-214ENST00000450198 GPATCH3Q96I76 525 aa18.34■□□□□ 0.53
SMARCA2-214ENST00000450198 HTATSF1O43719 755 aaKnown RBP18.33■□□□□ 0.53
SMARCA2-214ENST00000450198 MARCH6O60337 910 aa18.31■□□□□ 0.52
SMARCA2-214ENST00000450198 VPS53Q5VIR6 699 aa18.31■□□□□ 0.52
SMARCA2-214ENST00000450198 IRX6P78412 446 aaPredicted RBP18.31■□□□□ 0.52
SMARCA2-214ENST00000450198 NOC3LQ8WTT2 800 aaKnown RBP18.31■□□□□ 0.52
SMARCA2-214ENST00000450198 TRIM34Q9BYJ4 488 aa18.3■□□□□ 0.52
SMARCA2-214ENST00000450198 CEP89Q96ST8 783 aa18.3■□□□□ 0.52
SMARCA2-214ENST00000450198 CNKSR2Q8WXI2 1034 aa18.3■□□□□ 0.52
SMARCA2-214ENST00000450198 EIF4G1Q04637 1599 aaKnown RBP18.3■□□□□ 0.52
SMARCA2-214ENST00000450198 KLHL34Q8N239 644 aa18.29■□□□□ 0.52
SMARCA2-214ENST00000450198 RASSF8Q8NHQ8 419 aa18.29■□□□□ 0.52
SMARCA2-214ENST00000450198 GOLGA3Q08378 1498 aa18.28■□□□□ 0.52
SMARCA2-214ENST00000450198 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.28■□□□□ 0.52
SMARCA2-214ENST00000450198 AMPHP49418 695 aa18.27■□□□□ 0.52
SMARCA2-214ENST00000450198 NOL10Q9BSC4 688 aaKnown RBP18.26■□□□□ 0.51
SMARCA2-214ENST00000450198 RGS3P49796 1198 aa18.26■□□□□ 0.51
SMARCA2-214ENST00000450198 TERF2IPQ9NYB0 399 aa18.26■□□□□ 0.51
SMARCA2-214ENST00000450198 TCEAL9Q9UHQ7 104 aa18.26■□□□□ 0.51
SMARCA2-214ENST00000450198 HSCBQ8IWL3 235 aa18.25■□□□□ 0.51
SMARCA2-214ENST00000450198 DRC7Q8IY82 874 aa18.24■□□□□ 0.51
SMARCA2-214ENST00000450198 AMOTL1Q8IY63 956 aa18.23■□□□□ 0.51
SMARCA2-214ENST00000450198 WRNQ14191 1432 aaPredicted RBP eCLIP18.23■□□□□ 0.51
SMARCA2-214ENST00000450198 TOMM22Q9NS69 142 aa18.21■□□□□ 0.51
SMARCA2-214ENST00000450198 FHAD1B1AJZ9 1412 aa18.21■□□□□ 0.51
SMARCA2-214ENST00000450198 WASHC2AQ641Q2 1341 aa18.21■□□□□ 0.51
SMARCA2-214ENST00000450198 TPM4P67936 248 aa18.21■□□□□ 0.51
SMARCA2-214ENST00000450198 WASHC2CQ9Y4E1 1318 aa18.2■□□□□ 0.5
SMARCA2-214ENST00000450198 EIF3AQ14152 1382 aaKnown RBP18.19■□□□□ 0.5
SMARCA2-214ENST00000450198 SF3B2Q13435 895 aaKnown RBP18.19■□□□□ 0.5
SMARCA2-214ENST00000450198 U2AF1L5P0DN76 240 aaPredicted RBP18.19■□□□□ 0.5
SMARCA2-214ENST00000450198 U2AF1Q01081 240 aaKnown RBP eCLIP18.19■□□□□ 0.5
SMARCA2-214ENST00000450198 APBB1O00213 710 aa18.18■□□□□ 0.5
SMARCA2-214ENST00000450198 LMOD3Q0VAK6 560 aa18.18■□□□□ 0.5
SMARCA2-214ENST00000450198 PDS5BQ9NTI5 1447 aa18.18■□□□□ 0.5
SMARCA2-214ENST00000450198 HMMRO75330 724 aa18.18■□□□□ 0.5
SMARCA2-214ENST00000450198 KIF3BO15066 747 aa18.17■□□□□ 0.5
SMARCA2-214ENST00000450198 HSP90B1P14625 803 aaKnown RBP18.15■□□□□ 0.5
SMARCA2-214ENST00000450198 C1orf141Q5JVX7 400 aa18.15■□□□□ 0.5
SMARCA2-214ENST00000450198 ANO8Q9HCE9 1232 aaPredicted RBP18.15■□□□□ 0.5
SMARCA2-214ENST00000450198 LTV1Q96GA3 475 aaPredicted RBP18.15■□□□□ 0.5
SMARCA2-214ENST00000450198 SENP3-EIF4A1A0A087X0R7 540 aa18.15■□□□□ 0.5
SMARCA2-214ENST00000450198 A0A0U1RQG5 324 aaPredicted RBP18.12■□□□□ 0.49
SMARCA2-214ENST00000450198 KIF3AQ9Y496 699 aa18.12■□□□□ 0.49
SMARCA2-214ENST00000450198 PDE4CQ08493 712 aa18.11■□□□□ 0.49
SMARCA2-214ENST00000450198 TTC5Q8N0Z6 440 aa18.1■□□□□ 0.49
SMARCA2-214ENST00000450198 CHMP4CQ96CF2 233 aa18.1■□□□□ 0.49
SMARCA2-214ENST00000450198 ERICH6BQ5W0A0 696 aa18.1■□□□□ 0.49
SMARCA2-214ENST00000450198 LRRFIP1Q32MZ4 808 aaKnown RBP18.09■□□□□ 0.49
SMARCA2-214ENST00000450198 CARMIL1Q5VZK9 1371 aa18.08■□□□□ 0.49
SMARCA2-214ENST00000450198 AKAP17AQ02040 695 aaKnown RBP18.08■□□□□ 0.49
SMARCA2-214ENST00000450198 CEP164Q9UPV0 1460 aa18.08■□□□□ 0.48
SMARCA2-214ENST00000450198 RAD21O60216 631 aa18.07■□□□□ 0.48
SMARCA2-214ENST00000450198 FBXW7Q969H0 707 aa18.07■□□□□ 0.48
SMARCA2-214ENST00000450198 CYB5RLQ6IPT4 315 aa18.07■□□□□ 0.48
SMARCA2-214ENST00000450198 RSPH4AQ5TD94 716 aa18.07■□□□□ 0.48
SMARCA2-214ENST00000450198 PKD2Q13563 968 aa18.06■□□□□ 0.48
SMARCA2-214ENST00000450198 KTN1Q86UP2 1357 aaKnown RBP18.06■□□□□ 0.48
SMARCA2-214ENST00000450198 SYTL4Q96C24 671 aaPredicted RBP18.06■□□□□ 0.48
SMARCA2-214ENST00000450198 ITPRIPQ8IWB1 547 aa18.05■□□□□ 0.48
SMARCA2-214ENST00000450198 USP35Q9P2H5 1018 aa18.04■□□□□ 0.48
SMARCA2-214ENST00000450198 ATF3P18847 181 aa18.04■□□□□ 0.48
SMARCA2-214ENST00000450198 VPS37DQ86XT2 251 aa18.04■□□□□ 0.48
SMARCA2-214ENST00000450198 NUTM2FA1L443 756 aa18.04■□□□□ 0.48
SMARCA2-214ENST00000450198 TRIM6-TRIM34B2RNG4 842 aa18.04■□□□□ 0.48
SMARCA2-214ENST00000450198 PTMSP20962 102 aa18.04■□□□□ 0.48
SMARCA2-214ENST00000450198 RWDD1Q9H446 243 aaPredicted RBP18.04■□□□□ 0.48
SMARCA2-214ENST00000450198 NACADO15069 1562 aa18.03■□□□□ 0.48
SMARCA2-214ENST00000450198 SLC4A10Q6U841 1118 aa18.03■□□□□ 0.48
SMARCA2-214ENST00000450198 CSPP1Q1MSJ5 1256 aa18.03■□□□□ 0.48
SMARCA2-214ENST00000450198 SYNE3Q6ZMZ3 975 aa18.03■□□□□ 0.48
SMARCA2-214ENST00000450198 OSCARQ8IYS5 282 aa18.03■□□□□ 0.48
SMARCA2-214ENST00000450198 ANKRD30AQ9BXX3 1397 aa18.03■□□□□ 0.48
SMARCA2-214ENST00000450198 RBM33Q96EV2 1170 aaKnown RBP18.02■□□□□ 0.48
SMARCA2-214ENST00000450198 CUX2O14529 1486 aa18.02■□□□□ 0.48
SMARCA2-214ENST00000450198 TEFQ10587 303 aa18.02■□□□□ 0.48
SMARCA2-214ENST00000450198 NEXNQ0ZGT2 675 aa18.02■□□□□ 0.47
SMARCA2-214ENST00000450198 CCDC43Q96MW1 224 aaKnown RBP18.02■□□□□ 0.47
SMARCA2-214ENST00000450198 SMC4Q9NTJ3 1288 aa18.02■□□□□ 0.47
SMARCA2-214ENST00000450198 SYAP1Q96A49 352 aaPredicted RBP18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms