RNA–Protein interactions for RNA: ENST00000450102.6

SCN5A-208, Transcript of sodium voltage-gated channel alpha subunit 5, human

TSL 1 (best) BASIC

Gene SCN5A, Length 6,284 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SCN5A-208	ENST00000450102	ANO8	Q9HCE9	1232 aa	Predicted RBP	13.74	□□□□□ -0.21
SCN5A-208	ENST00000450102	HTATSF1	O43719	755 aa	Known RBP	13.74	□□□□□ -0.21
SCN5A-208	ENST00000450102	PAK3	O75914	559 aa	Predicted RBP	13.74	□□□□□ -0.21
SCN5A-208	ENST00000450102	PPP4R2	Q9NY27	417 aa		13.74	□□□□□ -0.21
SCN5A-208	ENST00000450102	CREBRF	Q8IUR6	639 aa		13.73	□□□□□ -0.21
SCN5A-208	ENST00000450102	TNNT3	P45378	269 aa	Predicted RBP	13.72	□□□□□ -0.21
SCN5A-208	ENST00000450102	SAFB2	Q14151	953 aa	Known RBP eCLIP	13.72	□□□□□ -0.21
SCN5A-208	ENST00000450102	TAF7L	Q5H9L4	462 aa		13.72	□□□□□ -0.21
SCN5A-208	ENST00000450102	VPS53	Q5VIR6	699 aa		13.72	□□□□□ -0.21
SCN5A-208	ENST00000450102	GOLGA6L1	Q8N7Z2	621 aa		13.72	□□□□□ -0.21
SCN5A-208	ENST00000450102	CHMP3	Q9Y3E7	222 aa		13.72	□□□□□ -0.21
SCN5A-208	ENST00000450102	ARID3A	Q99856	593 aa		13.72	□□□□□ -0.21
SCN5A-208	ENST00000450102	CCDC34	Q96HJ3	373 aa		13.71	□□□□□ -0.21
SCN5A-208	ENST00000450102	MORC1	Q86VD1	984 aa		13.7	□□□□□ -0.22
SCN5A-208	ENST00000450102	MARCH6	O60337	910 aa		13.69	□□□□□ -0.22
SCN5A-208	ENST00000450102	TMF1	P82094	1093 aa		13.69	□□□□□ -0.22
SCN5A-208	ENST00000450102	ZBTB4	Q9P1Z0	1013 aa	Predicted RBP	13.69	□□□□□ -0.22
SCN5A-208	ENST00000450102	FBXO3	Q9UK99	471 aa		13.69	□□□□□ -0.22
SCN5A-208	ENST00000450102	WWC1	Q8IX03	1113 aa		13.67	□□□□□ -0.22
SCN5A-208	ENST00000450102	GBP4	Q96PP9	640 aa		13.66	□□□□□ -0.22
SCN5A-208	ENST00000450102	B4GALNT3	Q6L9W6	998 aa		13.66	□□□□□ -0.22
SCN5A-208	ENST00000450102	IPO8	O15397	1037 aa	Known RBP	13.65	□□□□□ -0.22
SCN5A-208	ENST00000450102	STK26	Q9P289	416 aa		13.65	□□□□□ -0.22
SCN5A-208	ENST00000450102	FRAT2	O75474	233 aa	Predicted RBP	13.65	□□□□□ -0.22
SCN5A-208	ENST00000450102	KANK1	Q14678	1352 aa		13.65	□□□□□ -0.22
SCN5A-208	ENST00000450102	GPATCH3	Q96I76	525 aa		13.65	□□□□□ -0.22
SCN5A-208	ENST00000450102	SYAP1	Q96A49	352 aa	Predicted RBP	13.64	□□□□□ -0.23
SCN5A-208	ENST00000450102	SCRIB	Q14160	1630 aa		13.64	□□□□□ -0.23
SCN5A-208	ENST00000450102	HDGFL2	Q7Z4V5	671 aa	Predicted RBP	13.64	□□□□□ -0.23
SCN5A-208	ENST00000450102	TOMM22	Q9NS69	142 aa		13.64	□□□□□ -0.23
SCN5A-208	ENST00000450102	PTMS	P20962	102 aa		13.64	□□□□□ -0.23
SCN5A-208	ENST00000450102	TPM3	P06753	285 aa		13.63	□□□□□ -0.23
SCN5A-208	ENST00000450102	USP35	Q9P2H5	1018 aa		13.63	□□□□□ -0.23
SCN5A-208	ENST00000450102	CLIP1	P30622	1438 aa		13.62	□□□□□ -0.23
SCN5A-208	ENST00000450102	GZF1	Q9H116	711 aa	Predicted RBP	13.62	□□□□□ -0.23
SCN5A-208	ENST00000450102	GTF2E1	P29083	439 aa	Predicted RBP	13.62	□□□□□ -0.23
SCN5A-208	ENST00000450102	ZCCHC6	Q5VYS8	1495 aa	Known RBP	13.62	□□□□□ -0.23
SCN5A-208	ENST00000450102	DCAF11	Q8TEB1	546 aa		13.61	□□□□□ -0.23
SCN5A-208	ENST00000450102	CNKSR2	Q8WXI2	1034 aa		13.61	□□□□□ -0.23
SCN5A-208	ENST00000450102	TRIM6-TRIM34	B2RNG4	842 aa		13.61	□□□□□ -0.23
SCN5A-208	ENST00000450102	PES1	O00541	588 aa	Known RBP	13.61	□□□□□ -0.23
SCN5A-208	ENST00000450102	ITPRIP	Q8IWB1	547 aa		13.61	□□□□□ -0.23
SCN5A-208	ENST00000450102	CALD1	Q05682	793 aa	Known RBP	13.6	□□□□□ -0.23
SCN5A-208	ENST00000450102	STK31	Q9BXU1	1019 aa		13.59	□□□□□ -0.23
SCN5A-208	ENST00000450102	CHMP4A	Q9BY43	222 aa		13.58	□□□□□ -0.24
SCN5A-208	ENST00000450102	CSPP1	Q1MSJ5	1256 aa		13.57	□□□□□ -0.24
SCN5A-208	ENST00000450102	SPAG9	O60271	1321 aa	Known RBP	13.57	□□□□□ -0.24
SCN5A-208	ENST00000450102	TPD52L1	Q16890	204 aa	Predicted RBP	13.56	□□□□□ -0.24
SCN5A-208	ENST00000450102	TCEAL9	Q9UHQ7	104 aa		13.56	□□□□□ -0.24
SCN5A-208	ENST00000450102	NOL8	Q76FK4	1167 aa	Known RBP	13.56	□□□□□ -0.24
SCN5A-208	ENST00000450102	HDAC5	Q9UQL6	1122 aa		13.56	□□□□□ -0.24
SCN5A-208	ENST00000450102	U2AF1L5	P0DN76	240 aa	Predicted RBP	13.55	□□□□□ -0.24
SCN5A-208	ENST00000450102	U2AF1	Q01081	240 aa	Known RBP eCLIP	13.55	□□□□□ -0.24
SCN5A-208	ENST00000450102	SF3A1	Q15459	793 aa	Known RBP	13.55	□□□□□ -0.24
SCN5A-208	ENST00000450102	GGT6	Q6P531	493 aa		13.55	□□□□□ -0.24
SCN5A-208	ENST00000450102	RWDD1	Q9H446	243 aa	Predicted RBP	13.55	□□□□□ -0.24
SCN5A-208	ENST00000450102	SLK	Q9H2G2	1235 aa	Predicted RBP	13.55	□□□□□ -0.24
SCN5A-208	ENST00000450102	CTDP1	Q9Y5B0	961 aa	Predicted RBP	13.55	□□□□□ -0.24
SCN5A-208	ENST00000450102	PATL2	C9JE40	543 aa	Known RBP	13.54	□□□□□ -0.24
SCN5A-208	ENST00000450102	TSR1	Q2NL82	804 aa	Known RBP	13.54	□□□□□ -0.24
SCN5A-208	ENST00000450102	SET	Q01105	290 aa	Predicted RBP	13.54	□□□□□ -0.24
SCN5A-208	ENST00000450102	MSH5	O43196	834 aa		13.53	□□□□□ -0.24
SCN5A-208	ENST00000450102	SLC4A10	Q6U841	1118 aa		13.53	□□□□□ -0.24
SCN5A-208	ENST00000450102	SIN3A	Q96ST3	1273 aa		13.53	□□□□□ -0.24
SCN5A-208	ENST00000450102	DEK	P35659	375 aa	Known RBP	13.52	□□□□□ -0.24
SCN5A-208	ENST00000450102	RAD21	O60216	631 aa		13.52	□□□□□ -0.24
SCN5A-208	ENST00000450102	MFAP1	P55081	439 aa	Known RBP	13.52	□□□□□ -0.25
SCN5A-208	ENST00000450102	HMMR	O75330	724 aa		13.52	□□□□□ -0.25
SCN5A-208	ENST00000450102	DCAF1	Q9Y4B6	1507 aa		13.51	□□□□□ -0.25
SCN5A-208	ENST00000450102	TPM2	P07951	284 aa		13.51	□□□□□ -0.25
SCN5A-208	ENST00000450102	TRIM34	Q9BYJ4	488 aa		13.51	□□□□□ -0.25
SCN5A-208	ENST00000450102	KIF3A	Q9Y496	699 aa		13.5	□□□□□ -0.25
SCN5A-208	ENST00000450102	KIF16B	Q96L93	1317 aa		13.5	□□□□□ -0.25
SCN5A-208	ENST00000450102	AKAP17A	Q02040	695 aa	Known RBP	13.5	□□□□□ -0.25
SCN5A-208	ENST00000450102	CCAR2	Q8N163	923 aa	Known RBP	13.49	□□□□□ -0.25
SCN5A-208	ENST00000450102	FOXD4L1	Q9NU39	408 aa		13.49	□□□□□ -0.25
SCN5A-208	ENST00000450102	CCNB3	Q8WWL7	1395 aa		13.49	□□□□□ -0.25
SCN5A-208	ENST00000450102	CWC22	Q9HCG8	908 aa	Known RBP	13.49	□□□□□ -0.25
SCN5A-208	ENST00000450102		H3BQV1	296 aa		13.48	□□□□□ -0.25
SCN5A-208	ENST00000450102	IFFO2	Q5TF58	517 aa		13.48	□□□□□ -0.25
SCN5A-208	ENST00000450102	GOLGA6L3	A6NEY3	463 aa		13.47	□□□□□ -0.25
SCN5A-208	ENST00000450102	LTV1	Q96GA3	475 aa	Predicted RBP	13.47	□□□□□ -0.25
SCN5A-208	ENST00000450102	PMFBP1	Q8TBY8	1022 aa		13.47	□□□□□ -0.25
SCN5A-208	ENST00000450102	SMC4	Q9NTJ3	1288 aa		13.47	□□□□□ -0.25
SCN5A-208	ENST00000450102	PHF14	O94880	888 aa		13.46	□□□□□ -0.25
SCN5A-208	ENST00000450102	FOXD4L5	Q5VV16	416 aa	Predicted RBP	13.46	□□□□□ -0.25
SCN5A-208	ENST00000450102	FOXD4L4	Q8WXT5	416 aa	Predicted RBP	13.46	□□□□□ -0.25
SCN5A-208	ENST00000450102	KTN1	Q86UP2	1357 aa	Known RBP	13.46	□□□□□ -0.25
SCN5A-208	ENST00000450102	TCERG1	O14776	1098 aa	Known RBP	13.46	□□□□□ -0.25
SCN5A-208	ENST00000450102	TPM1	P09493	284 aa		13.46	□□□□□ -0.25
SCN5A-208	ENST00000450102	CCDC70	Q6NSX1	233 aa		13.46	□□□□□ -0.25
SCN5A-208	ENST00000450102	NOL10	Q9BSC4	688 aa	Known RBP	13.46	□□□□□ -0.25
SCN5A-208	ENST00000450102	ERCC6	Q03468	1493 aa		13.46	□□□□□ -0.26
SCN5A-208	ENST00000450102	NGDN	Q8NEJ9	315 aa	Known RBP	13.46	□□□□□ -0.26
SCN5A-208	ENST00000450102	AMOTL1	Q8IY63	956 aa		13.45	□□□□□ -0.26
SCN5A-208	ENST00000450102	AMPH	P49418	695 aa		13.45	□□□□□ -0.26
SCN5A-208	ENST00000450102	PCMTD1	Q96MG8	357 aa	Predicted RBP	13.45	□□□□□ -0.26
SCN5A-208	ENST00000450102	FAM184A	Q8NB25	1140 aa		13.44	□□□□□ -0.26
SCN5A-208	ENST00000450102	SYNE3	Q6ZMZ3	975 aa		13.44	□□□□□ -0.26
SCN5A-208	ENST00000450102	UTP3	Q9NQZ2	479 aa	Known RBP eCLIP	13.43	□□□□□ -0.26

Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms