RNA–Protein interactions for RNA: ENST00000449600.1

NPHP1-208, Transcript of nephrocystin 1, humanhuman

TSL 3

Gene NPHP1, Length 486 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP1-208ENST00000449600 PLEKHG5O94827 1062 aa14.14□□□□□ -0.15
NPHP1-208ENST00000449600 TIE1P35590 1138 aa14.14□□□□□ -0.15
NPHP1-208ENST00000449600 MAMSTRQ6ZN01 415 aa14.14□□□□□ -0.15
NPHP1-208ENST00000449600 CEP170Q5SW79 1584 aa14.13□□□□□ -0.15
NPHP1-208ENST00000449600 MAPKBP1O60336 1514 aa14.1□□□□□ -0.15
NPHP1-208ENST00000449600 LCE2DQ5TA82 110 aaPredicted RBP14.1□□□□□ -0.15
NPHP1-208ENST00000449600 ADGRL1O94910 1474 aa14.1□□□□□ -0.15
NPHP1-208ENST00000449600 FGD5Q6ZNL6 1462 aa14.09□□□□□ -0.15
NPHP1-208ENST00000449600 DIP2BQ9P265 1576 aa14.09□□□□□ -0.15
NPHP1-208ENST00000449600 SHROOM2Q13796 1616 aa14.08□□□□□ -0.16
NPHP1-208ENST00000449600 NUP160Q12769 1436 aa14.07□□□□□ -0.16
NPHP1-208ENST00000449600 LMTK3Q96Q04 1460 aa14.06□□□□□ -0.16
NPHP1-208ENST00000449600 TTLL13PA6NNM8 815 aa14.06□□□□□ -0.16
NPHP1-208ENST00000449600 NUBP1P53384 320 aa14.05□□□□□ -0.16
NPHP1-208ENST00000449600 SCUBE2Q9NQ36 999 aa14.05□□□□□ -0.16
NPHP1-208ENST00000449600 PLCD3Q8N3E9 789 aa14.04□□□□□ -0.16
NPHP1-208ENST00000449600 GRIN2AQ12879 1464 aa14.04□□□□□ -0.16
NPHP1-208ENST00000449600 SGIP1Q9BQI5 828 aa14.03□□□□□ -0.16
NPHP1-208ENST00000449600 PBRM1Q86U86 1689 aa14.02□□□□□ -0.16
NPHP1-208ENST00000449600 SOCS7O14512 581 aa14.02□□□□□ -0.17
NPHP1-208ENST00000449600 COLQQ9Y215 455 aaPredicted RBP14.02□□□□□ -0.17
NPHP1-208ENST00000449600 PCDHB13Q9Y5F0 798 aa13.98□□□□□ -0.17
NPHP1-208ENST00000449600 ABCA5Q8WWZ7 1642 aa13.97□□□□□ -0.17
NPHP1-208ENST00000449600 PCDH10Q9P2E7 1040 aa13.96□□□□□ -0.17
NPHP1-208ENST00000449600 ZBTB47Q9UFB7 747 aaPredicted RBP13.96□□□□□ -0.17
NPHP1-208ENST00000449600 TRIM35Q9UPQ4 493 aa13.96□□□□□ -0.17
NPHP1-208ENST00000449600 CUX1P39880 1505 aa13.95□□□□□ -0.18
NPHP1-208ENST00000449600 IER5LQ5T953 404 aa13.94□□□□□ -0.18
NPHP1-208ENST00000449600 PRG4Q92954 1404 aaPredicted RBP13.94□□□□□ -0.18
NPHP1-208ENST00000449600 ABCA10Q8WWZ4 1543 aa13.94□□□□□ -0.18
NPHP1-208ENST00000449600 IFNL1Q8IU54 200 aa13.93□□□□□ -0.18
NPHP1-208ENST00000449600 FAM163AQ96GL9 167 aaPredicted RBP13.93□□□□□ -0.18
NPHP1-208ENST00000449600 SEC24BO95487 1268 aa13.91□□□□□ -0.18
NPHP1-208ENST00000449600 ADAMTS12P58397 1594 aa13.9□□□□□ -0.18
NPHP1-208ENST00000449600 ADCY10Q96PN6 1610 aa13.9□□□□□ -0.19
NPHP1-208ENST00000449600 FKBP8Q14318 412 aa13.89□□□□□ -0.19
NPHP1-208ENST00000449600 ILDR2Q71H61 639 aa13.89□□□□□ -0.19
NPHP1-208ENST00000449600 TSPOAP1O95153 1857 aa13.87□□□□□ -0.19
NPHP1-208ENST00000449600 FAM212AQ96EL1 285 aa13.87□□□□□ -0.19
NPHP1-208ENST00000449600 JPH4Q96JJ6 628 aa13.87□□□□□ -0.19
NPHP1-208ENST00000449600 FHAD1B1AJZ9 1412 aa13.87□□□□□ -0.19
NPHP1-208ENST00000449600 COL17A1Q9UMD9 1497 aaPredicted RBP13.84□□□□□ -0.19
NPHP1-208ENST00000449600 TMEM106CQ9BVX2 250 aa13.83□□□□□ -0.2
NPHP1-208ENST00000449600 TOP2BQ02880 1626 aa13.82□□□□□ -0.2
NPHP1-208ENST00000449600 PPRC1Q5VV67 1664 aaKnown RBP13.82□□□□□ -0.2
NPHP1-208ENST00000449600 GLI2P10070 1586 aa13.81□□□□□ -0.2
NPHP1-208ENST00000449600 IRX5P78411 483 aaPredicted RBP13.78□□□□□ -0.2
NPHP1-208ENST00000449600 DISP3Q9P2K9 1392 aa13.78□□□□□ -0.2
NPHP1-208ENST00000449600 ERICH3Q5RHP9 1530 aa13.74□□□□□ -0.21
NPHP1-208ENST00000449600 RUSC2Q8N2Y8 1516 aa13.74□□□□□ -0.21
NPHP1-208ENST00000449600 PLB1Q6P1J6 1458 aa13.74□□□□□ -0.21
NPHP1-208ENST00000449600 PYGBP11216 843 aa13.72□□□□□ -0.21
NPHP1-208ENST00000449600 PLCG2P16885 1265 aa13.72□□□□□ -0.21
NPHP1-208ENST00000449600 SLAIN1Q8ND83 568 aa13.72□□□□□ -0.21
NPHP1-208ENST00000449600 TEX14Q8IWB6 1497 aa13.7□□□□□ -0.22
NPHP1-208ENST00000449600 DCAF8Q5TAQ9 597 aa13.7□□□□□ -0.22
NPHP1-208ENST00000449600 WRNQ14191 1432 aaPredicted RBP eCLIP13.7□□□□□ -0.22
NPHP1-208ENST00000449600 ASXL2Q76L83 1435 aa13.7□□□□□ -0.22
NPHP1-208ENST00000449600 ABCC2Q92887 1545 aa13.69□□□□□ -0.22
NPHP1-208ENST00000449600 ST18O60284 1047 aa13.67□□□□□ -0.22
NPHP1-208ENST00000449600 MAP3K4Q9Y6R4 1608 aa13.66□□□□□ -0.22
NPHP1-208ENST00000449600 PCDHB8Q9UN66 801 aa13.66□□□□□ -0.22
NPHP1-208ENST00000449600 CDAN1Q8IWY9 1227 aa13.65□□□□□ -0.22
NPHP1-208ENST00000449600 OCEL1Q9H607 264 aa13.65□□□□□ -0.22
NPHP1-208ENST00000449600 CERKQ8TCT0 537 aa13.64□□□□□ -0.23
NPHP1-208ENST00000449600 FBXO3Q9UK99 471 aa13.64□□□□□ -0.23
NPHP1-208ENST00000449600 EPRSP07814 1512 aaKnown RBP13.63□□□□□ -0.23
NPHP1-208ENST00000449600 PTPRMP28827 1452 aa13.62□□□□□ -0.23
NPHP1-208ENST00000449600 PTPRGP23470 1445 aa13.62□□□□□ -0.23
NPHP1-208ENST00000449600 PCF11O94913 1555 aaKnown RBP13.62□□□□□ -0.23
NPHP1-208ENST00000449600 KIAA0586Q9BVV6 1533 aa13.61□□□□□ -0.23
NPHP1-208ENST00000449600 UHRF1BP1LA0JNW5 1464 aa13.6□□□□□ -0.23
NPHP1-208ENST00000449600 SPATA31D1Q6ZQQ2 1576 aa13.59□□□□□ -0.23
NPHP1-208ENST00000449600 VASPP50552 380 aaPredicted RBP13.55□□□□□ -0.24
NPHP1-208ENST00000449600 PDCD7Q8N8D1 485 aaKnown RBP13.55□□□□□ -0.24
NPHP1-208ENST00000449600 ADAMTSL3P82987 1691 aa13.55□□□□□ -0.24
NPHP1-208ENST00000449600 KDM5BQ9UGL1 1544 aa13.54□□□□□ -0.24
NPHP1-208ENST00000449600 TNIKQ9UKE5 1360 aa13.53□□□□□ -0.24
NPHP1-208ENST00000449600 KIF21BO75037 1637 aa13.53□□□□□ -0.24
NPHP1-208ENST00000449600 GSE1Q14687 1217 aa13.52□□□□□ -0.25
NPHP1-208ENST00000449600 MAGI3Q5TCQ9 1506 aa13.52□□□□□ -0.25
NPHP1-208ENST00000449600 CUL7Q14999 1698 aa13.51□□□□□ -0.25
NPHP1-208ENST00000449600 ZNF467Q7Z7K2 595 aaPredicted RBP13.51□□□□□ -0.25
NPHP1-208ENST00000449600 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.51□□□□□ -0.25
NPHP1-208ENST00000449600 BIVM-ERCC5R4GMW8 1640 aa13.5□□□□□ -0.25
NPHP1-208ENST00000449600 UACAQ9BZF9 1416 aa13.5□□□□□ -0.25
NPHP1-208ENST00000449600 CHRM1P11229 460 aaPredicted RBP13.5□□□□□ -0.25
NPHP1-208ENST00000449600 TMEM121BQ9BXQ6 578 aaPredicted RBP13.49□□□□□ -0.25
NPHP1-208ENST00000449600 CARMIL2Q6F5E8 1435 aa13.47□□□□□ -0.25
NPHP1-208ENST00000449600 KLHL34Q8N239 644 aa13.47□□□□□ -0.25
NPHP1-208ENST00000449600 ARAP3Q8WWN8 1544 aa13.44□□□□□ -0.26
NPHP1-208ENST00000449600 SNPHO15079 494 aa13.44□□□□□ -0.26
NPHP1-208ENST00000449600 CD109Q6YHK3 1445 aa13.44□□□□□ -0.26
NPHP1-208ENST00000449600 WDR7Q9Y4E6 1490 aa13.43□□□□□ -0.26
NPHP1-208ENST00000449600 HSPA2P54652 639 aa13.42□□□□□ -0.26
NPHP1-208ENST00000449600 PSEN1P49768 467 aa13.41□□□□□ -0.26
NPHP1-208ENST00000449600 MKRN3Q13064 507 aaKnown RBP13.41□□□□□ -0.26
NPHP1-208ENST00000449600 ZCCHC11Q5TAX3 1644 aaKnown RBP13.41□□□□□ -0.26
NPHP1-208ENST00000449600 BCORL1Q5H9F3 1711 aa13.4□□□□□ -0.26
NPHP1-208ENST00000449600 CFAP43Q8NDM7 1665 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms