RNA–Protein interactions for RNA: ENST00000449510.6

UBE3B-204, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 3,771 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-204ENST00000449510 CHGAP10645 457 aaKnown RBP16.16■□□□□ 0.18
UBE3B-204ENST00000449510 RRBP1Q9P2E9 1410 aaKnown RBP16.16■□□□□ 0.18
UBE3B-204ENST00000449510 SMARCA4P51532 1647 aa16.14■□□□□ 0.17
UBE3B-204ENST00000449510 BECN1Q14457 450 aa16.14■□□□□ 0.17
UBE3B-204ENST00000449510 NFKBIBQ15653 356 aa16.14■□□□□ 0.17
UBE3B-204ENST00000449510 NBPF8Q3BBV2 869 aa16.14■□□□□ 0.17
UBE3B-204ENST00000449510 ARID3AQ99856 593 aa16.14■□□□□ 0.17
UBE3B-204ENST00000449510 SYNJ1O43426 1573 aa16.13■□□□□ 0.17
UBE3B-204ENST00000449510 TPRNQ4KMQ1 711 aa16.12■□□□□ 0.17
UBE3B-204ENST00000449510 CCDC146Q8IYE0 955 aa16.11■□□□□ 0.17
UBE3B-204ENST00000449510 KNSTRNQ9Y448 316 aa16.11■□□□□ 0.17
UBE3B-204ENST00000449510 CCDC7Q96M83 1385 aa16.11■□□□□ 0.17
UBE3B-204ENST00000449510 CCDC18Q5T9S5 1454 aa16.11■□□□□ 0.17
UBE3B-204ENST00000449510 FMN1Q68DA7 1419 aa16.11■□□□□ 0.17
UBE3B-204ENST00000449510 ZBTB7CA1YPR0 619 aa16.1■□□□□ 0.17
UBE3B-204ENST00000449510 TRIM44Q96DX7 344 aaPredicted RBP16.09■□□□□ 0.17
UBE3B-204ENST00000449510 FRAT2O75474 233 aaPredicted RBP16.09■□□□□ 0.17
UBE3B-204ENST00000449510 NCLP19338 710 aaKnown RBP16.07■□□□□ 0.16
UBE3B-204ENST00000449510 CLUAP1Q96AJ1 413 aa16.07■□□□□ 0.16
UBE3B-204ENST00000449510 ZNF644Q9H582 1327 aaPredicted RBP16.07■□□□□ 0.16
UBE3B-204ENST00000449510 TDRD9Q8NDG6 1382 aaKnown RBP16.06■□□□□ 0.16
UBE3B-204ENST00000449510 ANP32BQ92688 251 aaKnown RBP16.06■□□□□ 0.16
UBE3B-204ENST00000449510 USP35Q9P2H5 1018 aa16.05■□□□□ 0.16
UBE3B-204ENST00000449510 IGF1RP08069 1367 aa16.05■□□□□ 0.16
UBE3B-204ENST00000449510 VSIG10Q8N0Z9 540 aa16.03■□□□□ 0.16
UBE3B-204ENST00000449510 CNTLNQ9NXG0 1405 aa16.03■□□□□ 0.16
UBE3B-204ENST00000449510 BCL2L13Q9BXK5 485 aa16.02■□□□□ 0.16
UBE3B-204ENST00000449510 LRRC9Q6ZRR7 1453 aa16.02■□□□□ 0.16
UBE3B-204ENST00000449510 NLRP13Q86W25 1043 aa16.01■□□□□ 0.15
UBE3B-204ENST00000449510 BACH2Q9BYV9 841 aa16.01■□□□□ 0.15
UBE3B-204ENST00000449510 PNNQ9H307 717 aaKnown RBP16.01■□□□□ 0.15
UBE3B-204ENST00000449510 SLC24A1O60721 1099 aa16■□□□□ 0.15
UBE3B-204ENST00000449510 FOXD4L1Q9NU39 408 aa16■□□□□ 0.15
UBE3B-204ENST00000449510 USP47Q96K76 1375 aa15.99■□□□□ 0.15
UBE3B-204ENST00000449510 ATAD2BQ9ULI0 1458 aa15.99■□□□□ 0.15
UBE3B-204ENST00000449510 PNISRQ8TF01 805 aaKnown RBP15.99■□□□□ 0.15
UBE3B-204ENST00000449510 KTN1Q86UP2 1357 aaKnown RBP15.99■□□□□ 0.15
UBE3B-204ENST00000449510 RALBP1Q15311 655 aa15.98■□□□□ 0.15
UBE3B-204ENST00000449510 PANK3Q9H999 370 aa15.97■□□□□ 0.15
UBE3B-204ENST00000449510 FAM161AQ3B820 660 aa15.97■□□□□ 0.15
UBE3B-204ENST00000449510 EIF4G1Q04637 1599 aaKnown RBP15.96■□□□□ 0.15
UBE3B-204ENST00000449510 UACAQ9BZF9 1416 aa15.96■□□□□ 0.15
UBE3B-204ENST00000449510 RRP7AQ9Y3A4 280 aaKnown RBP15.96■□□□□ 0.15
UBE3B-204ENST00000449510 FGD6Q6ZV73 1430 aa15.96■□□□□ 0.14
UBE3B-204ENST00000449510 MYBBP1AQ9BQG0 1328 aaKnown RBP15.95■□□□□ 0.14
UBE3B-204ENST00000449510 NUP155O75694 1391 aa15.95■□□□□ 0.14
UBE3B-204ENST00000449510 FTSJ3Q8IY81 847 aaKnown RBP15.95■□□□□ 0.14
UBE3B-204ENST00000449510 C20orf194Q5TEA3 1177 aa15.95■□□□□ 0.14
UBE3B-204ENST00000449510 COG6Q9Y2V7 657 aa15.95■□□□□ 0.14
UBE3B-204ENST00000449510 ROCK2O75116 1388 aaKnown RBP15.95■□□□□ 0.14
UBE3B-204ENST00000449510 MFAP1P55081 439 aaKnown RBP15.95■□□□□ 0.14
UBE3B-204ENST00000449510 MAPKBP1O60336 1514 aa15.94■□□□□ 0.14
UBE3B-204ENST00000449510 PRXQ9BXM0 1461 aa15.93■□□□□ 0.14
UBE3B-204ENST00000449510 PLEKHD1A6NEE1 506 aa15.93■□□□□ 0.14
UBE3B-204ENST00000449510 GOLGA2Q08379 1002 aa15.93■□□□□ 0.14
UBE3B-204ENST00000449510 TMF1P82094 1093 aa15.92■□□□□ 0.14
UBE3B-204ENST00000449510 MS4A1P11836 297 aa15.91■□□□□ 0.14
UBE3B-204ENST00000449510 GOLGA6L3A6NEY3 463 aa15.9■□□□□ 0.14
UBE3B-204ENST00000449510 APAF1O14727 1248 aa15.9■□□□□ 0.14
UBE3B-204ENST00000449510 CHMP7Q8WUX9 453 aaPredicted RBP15.9■□□□□ 0.14
UBE3B-204ENST00000449510 L1TD1Q5T7N2 865 aaKnown RBP15.89■□□□□ 0.13
UBE3B-204ENST00000449510 ADAMTS8Q9UP79 889 aa15.89■□□□□ 0.13
UBE3B-204ENST00000449510 HSP90AB1P08238 724 aaKnown RBP15.88■□□□□ 0.13
UBE3B-204ENST00000449510 PDE3BQ13370 1112 aa15.88■□□□□ 0.13
UBE3B-204ENST00000449510 KIF15Q9NS87 1388 aa15.88■□□□□ 0.13
UBE3B-204ENST00000449510 CENPQQ7L2Z9 268 aaPredicted RBP15.88■□□□□ 0.13
UBE3B-204ENST00000449510 POGKQ9P215 609 aa15.87■□□□□ 0.13
UBE3B-204ENST00000449510 HSP90AA2PQ14568 343 aaPredicted RBP15.87■□□□□ 0.13
UBE3B-204ENST00000449510 HNRNPMP52272 730 aaKnown RBP eCLIP15.87■□□□□ 0.13
UBE3B-204ENST00000449510 RSPH6AQ9H0K4 717 aa15.86■□□□□ 0.13
UBE3B-204ENST00000449510 U2SURPO15042 1029 aaKnown RBP15.85■□□□□ 0.13
UBE3B-204ENST00000449510 PANK1Q8TE04 598 aa15.85■□□□□ 0.13
UBE3B-204ENST00000449510 SAFB2Q14151 953 aaKnown RBP eCLIP15.84■□□□□ 0.13
UBE3B-204ENST00000449510 NBPF1Q3BBV0 1214 aa15.83■□□□□ 0.13
UBE3B-204ENST00000449510 SMG6Q86US8 1419 aaKnown RBP15.83■□□□□ 0.12
UBE3B-204ENST00000449510 HSCBQ8IWL3 235 aa15.83■□□□□ 0.12
UBE3B-204ENST00000449510 MYH16Q9H6N6 1097 aa15.83■□□□□ 0.12
UBE3B-204ENST00000449510 APBB1O00213 710 aa15.83■□□□□ 0.12
UBE3B-204ENST00000449510 BCAR3O75815 825 aa15.83■□□□□ 0.12
UBE3B-204ENST00000449510 DNTTIP2Q5QJE6 756 aaKnown RBP15.83■□□□□ 0.12
UBE3B-204ENST00000449510 CFTRP13569 1480 aa15.82■□□□□ 0.12
UBE3B-204ENST00000449510 PLCB2Q00722 1185 aa15.82■□□□□ 0.12
UBE3B-204ENST00000449510 RAD54L2Q9Y4B4 1467 aa15.8■□□□□ 0.12
UBE3B-204ENST00000449510 PTMAP06454 111 aaKnown RBP15.8■□□□□ 0.12
UBE3B-204ENST00000449510 GOLGA6L22H0YM25 854 aa15.79■□□□□ 0.12
UBE3B-204ENST00000449510 NAIPQ13075 1403 aa15.79■□□□□ 0.12
UBE3B-204ENST00000449510 MYOM3Q5VTT5 1437 aa15.77■□□□□ 0.12
UBE3B-204ENST00000449510 AMER1Q5JTC6 1135 aaPredicted RBP15.77■□□□□ 0.12
UBE3B-204ENST00000449510 FOXD4L5Q5VV16 416 aaPredicted RBP15.77■□□□□ 0.11
UBE3B-204ENST00000449510 ITPRIPQ8IWB1 547 aa15.77■□□□□ 0.11
UBE3B-204ENST00000449510 FOXD4L4Q8WXT5 416 aaPredicted RBP15.77■□□□□ 0.11
UBE3B-204ENST00000449510 AQRO60306 1485 aaKnown RBP eCLIP15.77■□□□□ 0.111e-6■■■■■ 33.2
UBE3B-204ENST00000449510 CENPJQ9HC77 1338 aaPredicted RBP15.76■□□□□ 0.11
UBE3B-204ENST00000449510 NCOA2Q15596 1464 aa15.76■□□□□ 0.11
UBE3B-204ENST00000449510 PTPRKQ15262 1439 aa15.76■□□□□ 0.11
UBE3B-204ENST00000449510 TIAM1Q13009 1591 aa15.75■□□□□ 0.11
UBE3B-204ENST00000449510 HFM1A2PYH4 1435 aa15.75■□□□□ 0.11
UBE3B-204ENST00000449510 MORC1Q86VD1 984 aa15.75■□□□□ 0.11
UBE3B-204ENST00000449510 U2AF1L5P0DN76 240 aaPredicted RBP15.75■□□□□ 0.11
UBE3B-204ENST00000449510 U2AF1Q01081 240 aaKnown RBP eCLIP15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 920.2 ms