RNA–Protein interactions for RNA: ENST00000449307.3

AC006001.3-201, humanhuman

TSL 3 BASIC

Gene AC006001.3, Length 7,092 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC006001.3-201ENST00000449307 CYB5RLQ6IPT4 315 aa16.36■□□□□ 0.21
AC006001.3-201ENST00000449307 LTV1Q96GA3 475 aaPredicted RBP16.36■□□□□ 0.21
AC006001.3-201ENST00000449307 CHMP4BQ9H444 224 aaKnown RBP16.36■□□□□ 0.21
AC006001.3-201ENST00000449307 GORABQ5T7V8 394 aa16.35■□□□□ 0.21
AC006001.3-201ENST00000449307 RGS3P49796 1198 aa16.34■□□□□ 0.21
AC006001.3-201ENST00000449307 DDRGK1Q96HY6 314 aa16.34■□□□□ 0.21
AC006001.3-201ENST00000449307 CARMIL2Q6F5E8 1435 aa16.33■□□□□ 0.2
AC006001.3-201ENST00000449307 DNTTIP2Q5QJE6 756 aaKnown RBP16.33■□□□□ 0.2
AC006001.3-201ENST00000449307 FRAT2O75474 233 aaPredicted RBP16.32■□□□□ 0.2
AC006001.3-201ENST00000449307 HSP90AB1P08238 724 aaKnown RBP16.32■□□□□ 0.2
AC006001.3-201ENST00000449307 NACADO15069 1562 aa16.31■□□□□ 0.2
AC006001.3-201ENST00000449307 GOLGA6L4A6NEF3 574 aa16.29■□□□□ 0.2
AC006001.3-201ENST00000449307 CUX2O14529 1486 aa16.29■□□□□ 0.2
AC006001.3-201ENST00000449307 MS4A1P11836 297 aa16.29■□□□□ 0.2
AC006001.3-201ENST00000449307 GOLGA6L6A8MZA4 724 aa16.29■□□□□ 0.2
AC006001.3-201ENST00000449307 KIF3BO15066 747 aa16.29■□□□□ 0.2
AC006001.3-201ENST00000449307 SIN3AQ96ST3 1273 aa16.28■□□□□ 0.2
AC006001.3-201ENST00000449307 KRI1Q8N9T8 703 aaKnown RBP16.27■□□□□ 0.2
AC006001.3-201ENST00000449307 WASHC2CQ9Y4E1 1318 aa16.27■□□□□ 0.2
AC006001.3-201ENST00000449307 EFCAB2Q5VUJ9 269 aa16.27■□□□□ 0.19
AC006001.3-201ENST00000449307 AMPHP49418 695 aa16.27■□□□□ 0.19
AC006001.3-201ENST00000449307 CEP162Q5TB80 1403 aa16.26■□□□□ 0.19
AC006001.3-201ENST00000449307 VPS53Q5VIR6 699 aa16.26■□□□□ 0.19
AC006001.3-201ENST00000449307 MCCP23508 829 aa16.24■□□□□ 0.19
AC006001.3-201ENST00000449307 CARMIL1Q5VZK9 1371 aa16.24■□□□□ 0.19
AC006001.3-201ENST00000449307 MIER1Q8N108 512 aa16.23■□□□□ 0.19
AC006001.3-201ENST00000449307 SPAG9O60271 1321 aaKnown RBP16.23■□□□□ 0.19
AC006001.3-201ENST00000449307 PDS5BQ9NTI5 1447 aa16.23■□□□□ 0.19
AC006001.3-201ENST00000449307 SYTL4Q96C24 671 aaPredicted RBP16.23■□□□□ 0.19
AC006001.3-201ENST00000449307 PDE4CQ08493 712 aa16.22■□□□□ 0.19
AC006001.3-201ENST00000449307 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.22■□□□□ 0.19
AC006001.3-201ENST00000449307 KIAA1211Q6ZU35 1233 aa16.21■□□□□ 0.19
AC006001.3-201ENST00000449307 FOXD1Q16676 465 aa16.21■□□□□ 0.19
AC006001.3-201ENST00000449307 CECR2Q9BXF3 1484 aa16.21■□□□□ 0.19
AC006001.3-201ENST00000449307 U2AF1L5P0DN76 240 aaPredicted RBP16.21■□□□□ 0.19
AC006001.3-201ENST00000449307 U2AF1Q01081 240 aaKnown RBP eCLIP16.21■□□□□ 0.19
AC006001.3-201ENST00000449307 ANO8Q9HCE9 1232 aaPredicted RBP16.21■□□□□ 0.19
AC006001.3-201ENST00000449307 PKD2Q13563 968 aa16.2■□□□□ 0.18
AC006001.3-201ENST00000449307 FBXW7Q969H0 707 aa16.2■□□□□ 0.18
AC006001.3-201ENST00000449307 EEA1Q15075 1411 aa16.19■□□□□ 0.18
AC006001.3-201ENST00000449307 HNRNPMP52272 730 aaKnown RBP eCLIP16.18■□□□□ 0.18
AC006001.3-201ENST00000449307 CEP164Q9UPV0 1460 aa16.18■□□□□ 0.18
AC006001.3-201ENST00000449307 ANP32EQ9BTT0 268 aa16.18■□□□□ 0.18
AC006001.3-201ENST00000449307 STK31Q9BXU1 1019 aa16.18■□□□□ 0.18
AC006001.3-201ENST00000449307 CWC22Q9HCG8 908 aaKnown RBP16.18■□□□□ 0.18
AC006001.3-201ENST00000449307 SUPT16HQ9Y5B9 1047 aaKnown RBP16.18■□□□□ 0.18
AC006001.3-201ENST00000449307 RAD21O60216 631 aa16.17■□□□□ 0.18
AC006001.3-201ENST00000449307 TOMM22Q9NS69 142 aa16.17■□□□□ 0.18
AC006001.3-201ENST00000449307 GLIPR1L2Q4G1C9 344 aa16.17■□□□□ 0.18
AC006001.3-201ENST00000449307 FHAD1B1AJZ9 1412 aa16.16■□□□□ 0.18
AC006001.3-201ENST00000449307 SPRYD3Q8NCJ5 442 aa16.15■□□□□ 0.18
AC006001.3-201ENST00000449307 TDRD9Q8NDG6 1382 aaKnown RBP16.15■□□□□ 0.18
AC006001.3-201ENST00000449307 DCAF1Q9Y4B6 1507 aa16.15■□□□□ 0.18
AC006001.3-201ENST00000449307 KIAA2012Q0VF49 1180 aa16.15■□□□□ 0.18
AC006001.3-201ENST00000449307 SLC4A10Q6U841 1118 aa16.15■□□□□ 0.18
AC006001.3-201ENST00000449307 NRDCO43847 1150 aa16.15■□□□□ 0.18
AC006001.3-201ENST00000449307 TRIM34Q9BYJ4 488 aa16.15■□□□□ 0.18
AC006001.3-201ENST00000449307 CTDP1Q9Y5B0 961 aaPredicted RBP16.14■□□□□ 0.17
AC006001.3-201ENST00000449307 ROCK2O75116 1388 aaKnown RBP16.14■□□□□ 0.17
AC006001.3-201ENST00000449307 SOGA1O94964 1423 aa16.14■□□□□ 0.17
AC006001.3-201ENST00000449307 CALD1Q05682 793 aaKnown RBP16.14■□□□□ 0.17
AC006001.3-201ENST00000449307 DRC7Q8IY82 874 aa16.14■□□□□ 0.17
AC006001.3-201ENST00000449307 MARCH6O60337 910 aa16.13■□□□□ 0.17
AC006001.3-201ENST00000449307 HSP90B1P14625 803 aaKnown RBP16.13■□□□□ 0.17
AC006001.3-201ENST00000449307 NGEFQ8N5V2 710 aa16.13■□□□□ 0.17
AC006001.3-201ENST00000449307 RASSF8Q8NHQ8 419 aa16.12■□□□□ 0.17
AC006001.3-201ENST00000449307 TERF2IPQ9NYB0 399 aa16.12■□□□□ 0.17
AC006001.3-201ENST00000449307 GPATCH3Q96I76 525 aa16.12■□□□□ 0.17
AC006001.3-201ENST00000449307 ITPRIPQ8IWB1 547 aa16.11■□□□□ 0.17
AC006001.3-201ENST00000449307 PPP1R1BQ9UD71 204 aaPredicted RBP16.11■□□□□ 0.17
AC006001.3-201ENST00000449307 C1orf141Q5JVX7 400 aa16.11■□□□□ 0.17
AC006001.3-201ENST00000449307 B4GALNT3Q6L9W6 998 aa16.11■□□□□ 0.17
AC006001.3-201ENST00000449307 OSCARQ8IYS5 282 aa16.11■□□□□ 0.17
AC006001.3-201ENST00000449307 ERICH6BQ5W0A0 696 aa16.11■□□□□ 0.17
AC006001.3-201ENST00000449307 IPO8O15397 1037 aaKnown RBP16.1■□□□□ 0.17
AC006001.3-201ENST00000449307 HSCBQ8IWL3 235 aa16.1■□□□□ 0.17
AC006001.3-201ENST00000449307 NUP155O75694 1391 aa16.1■□□□□ 0.17
AC006001.3-201ENST00000449307 CNKSR2Q8WXI2 1034 aa16.09■□□□□ 0.17
AC006001.3-201ENST00000449307 TRIM6-TRIM34B2RNG4 842 aa16.08■□□□□ 0.17
AC006001.3-201ENST00000449307 CHAF1AQ13111 956 aaPredicted RBP16.07■□□□□ 0.16
AC006001.3-201ENST00000449307 CREBRFQ8IUR6 639 aa16.07■□□□□ 0.16
AC006001.3-201ENST00000449307 FAM69CQ0P6D2 419 aa16.07■□□□□ 0.16
AC006001.3-201ENST00000449307 PSME1Q06323 249 aa16.07■□□□□ 0.16
AC006001.3-201ENST00000449307 NOC3LQ8WTT2 800 aaKnown RBP16.07■□□□□ 0.16
AC006001.3-201ENST00000449307 TRAK1Q9UPV9 953 aa16.07■□□□□ 0.16
AC006001.3-201ENST00000449307 EIF3AQ14152 1382 aaKnown RBP16.06■□□□□ 0.16
AC006001.3-201ENST00000449307 WWC1Q8IX03 1113 aa16.06■□□□□ 0.16
AC006001.3-201ENST00000449307 CHMP4AQ9BY43 222 aa16.06■□□□□ 0.16
AC006001.3-201ENST00000449307 TCEAL9Q9UHQ7 104 aa16.06■□□□□ 0.16
AC006001.3-201ENST00000449307 ARHGAP35Q9NRY4 1499 aa16.06■□□□□ 0.16
AC006001.3-201ENST00000449307 ATF3P18847 181 aa16.05■□□□□ 0.16
AC006001.3-201ENST00000449307 SF3B2Q13435 895 aaKnown RBP16.05■□□□□ 0.16
AC006001.3-201ENST00000449307 NOL10Q9BSC4 688 aaKnown RBP16.04■□□□□ 0.16
AC006001.3-201ENST00000449307 SAMD1Q6SPF0 538 aaPredicted RBP16.04■□□□□ 0.16
AC006001.3-201ENST00000449307 KTN1Q86UP2 1357 aaKnown RBP16.04■□□□□ 0.16
AC006001.3-201ENST00000449307 BAZ1AQ9NRL2 1556 aaPredicted RBP16.04■□□□□ 0.16
AC006001.3-201ENST00000449307 TTC5Q8N0Z6 440 aa16.03■□□□□ 0.16
AC006001.3-201ENST00000449307 ANKRD30AQ9BXX3 1397 aa16.02■□□□□ 0.16
AC006001.3-201ENST00000449307 L1TD1Q5T7N2 865 aaKnown RBP16■□□□□ 0.15
AC006001.3-201ENST00000449307 VPS37DQ86XT2 251 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms