RNA–Protein interactions for RNA: ENST00000449261.6

BRPF3-206, Transcript of bromodomain and PHD finger containing 3, humanhuman

TSL 5

Gene BRPF3, Length 4,816 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRPF3-206ENST00000449261 RAB3GAP2Q9H2M9 1393 aa14.89□□□□□ -0.03
BRPF3-206ENST00000449261 SAFB2Q14151 953 aaKnown RBP eCLIP14.89□□□□□ -0.03
BRPF3-206ENST00000449261 SRPK2P78362 688 aaKnown RBP14.89□□□□□ -0.03
BRPF3-206ENST00000449261 SUPT16HQ9Y5B9 1047 aaKnown RBP14.89□□□□□ -0.03
BRPF3-206ENST00000449261 U2SURPO15042 1029 aaKnown RBP14.88□□□□□ -0.03
BRPF3-206ENST00000449261 LAS1LQ9Y4W2 734 aaKnown RBP14.87□□□□□ -0.03
BRPF3-206ENST00000449261 HNRNPMP52272 730 aaKnown RBP eCLIP14.87□□□□□ -0.03
BRPF3-206ENST00000449261 HSPA5P11021 654 aaKnown RBP14.87□□□□□ -0.03
BRPF3-206ENST00000449261 KIF3BO15066 747 aa14.86□□□□□ -0.03
BRPF3-206ENST00000449261 TULP1O00294 542 aaPredicted RBP14.86□□□□□ -0.03
BRPF3-206ENST00000449261 ANP32BQ92688 251 aaKnown RBP14.86□□□□□ -0.03
BRPF3-206ENST00000449261 STK26Q9P289 416 aa14.85□□□□□ -0.03
BRPF3-206ENST00000449261 NBR1Q14596 966 aa14.84□□□□□ -0.03
BRPF3-206ENST00000449261 FTSJ3Q8IY81 847 aaKnown RBP14.84□□□□□ -0.03
BRPF3-206ENST00000449261 NAP1L5Q96NT1 182 aaPredicted RBP14.83□□□□□ -0.03
BRPF3-206ENST00000449261 RUSC2Q8N2Y8 1516 aa14.83□□□□□ -0.03
BRPF3-206ENST00000449261 RSPH4AQ5TD94 716 aa14.83□□□□□ -0.04
BRPF3-206ENST00000449261 SPAG9O60271 1321 aaKnown RBP14.82□□□□□ -0.04
BRPF3-206ENST00000449261 TAF7LQ5H9L4 462 aa14.82□□□□□ -0.04
BRPF3-206ENST00000449261 CDK11BP21127 795 aaKnown RBP14.82□□□□□ -0.04
BRPF3-206ENST00000449261 SOX12O15370 315 aa14.82□□□□□ -0.04
BRPF3-206ENST00000449261 CCDC18Q5T9S5 1454 aa14.81□□□□□ -0.04
BRPF3-206ENST00000449261 MORC1Q86VD1 984 aa14.81□□□□□ -0.04
BRPF3-206ENST00000449261 FRAT1Q92837 279 aaPredicted RBP14.8□□□□□ -0.04
BRPF3-206ENST00000449261 RSPH6AQ9H0K4 717 aa14.8□□□□□ -0.04
BRPF3-206ENST00000449261 PNNQ9H307 717 aaKnown RBP14.78□□□□□ -0.04
BRPF3-206ENST00000449261 PTPRGP23470 1445 aa14.77□□□□□ -0.05
BRPF3-206ENST00000449261 L3MBTL2Q969R5 705 aa14.76□□□□□ -0.05
BRPF3-206ENST00000449261 ROCK2O75116 1388 aaKnown RBP14.76□□□□□ -0.05
BRPF3-206ENST00000449261 WASHC2CQ9Y4E1 1318 aa14.75□□□□□ -0.05
BRPF3-206ENST00000449261 CCER2I3L3R5 266 aa14.75□□□□□ -0.05
BRPF3-206ENST00000449261 HDGFL2Q7Z4V5 671 aaPredicted RBP14.74□□□□□ -0.05
BRPF3-206ENST00000449261 IGF1RP08069 1367 aa14.73□□□□□ -0.05
BRPF3-206ENST00000449261 KLHL34Q8N239 644 aa14.73□□□□□ -0.05
BRPF3-206ENST00000449261 FGD5Q6ZNL6 1462 aa14.73□□□□□ -0.05
BRPF3-206ENST00000449261 BECN1Q14457 450 aa14.72□□□□□ -0.05
BRPF3-206ENST00000449261 PPP4R2Q9NY27 417 aa14.72□□□□□ -0.05
BRPF3-206ENST00000449261 NCAPD3P42695 1498 aa14.71□□□□□ -0.05
BRPF3-206ENST00000449261 KTN1Q86UP2 1357 aaKnown RBP14.71□□□□□ -0.05
BRPF3-206ENST00000449261 GAPVD1Q14C86 1478 aa14.71□□□□□ -0.05
BRPF3-206ENST00000449261 MS4A1P11836 297 aa14.71□□□□□ -0.05
BRPF3-206ENST00000449261 CYB5RLQ6IPT4 315 aa14.71□□□□□ -0.05
BRPF3-206ENST00000449261 OSCARQ8IYS5 282 aa14.7□□□□□ -0.06
BRPF3-206ENST00000449261 RGS3P49796 1198 aa14.7□□□□□ -0.06
BRPF3-206ENST00000449261 RAD54L2Q9Y4B4 1467 aa14.7□□□□□ -0.06
BRPF3-206ENST00000449261 CHMP4BQ9H444 224 aaKnown RBP14.69□□□□□ -0.06
BRPF3-206ENST00000449261 DDRGK1Q96HY6 314 aa14.68□□□□□ -0.06
BRPF3-206ENST00000449261 TSHZ2Q9NRE2 1034 aa14.68□□□□□ -0.06
BRPF3-206ENST00000449261 NUTM2DQ5VT03 806 aaPredicted RBP14.67□□□□□ -0.06
BRPF3-206ENST00000449261 PAK3O75914 559 aaPredicted RBP14.66□□□□□ -0.06
BRPF3-206ENST00000449261 U2AF1L5P0DN76 240 aaPredicted RBP14.66□□□□□ -0.06
BRPF3-206ENST00000449261 U2AF1Q01081 240 aaKnown RBP eCLIP14.66□□□□□ -0.06
BRPF3-206ENST00000449261 CASC1Q6TDU7 716 aa14.65□□□□□ -0.06
BRPF3-206ENST00000449261 RALBP1Q15311 655 aa14.65□□□□□ -0.06
BRPF3-206ENST00000449261 B4GALNT3Q6L9W6 998 aa14.64□□□□□ -0.07
BRPF3-206ENST00000449261 EID1Q9Y6B2 187 aa14.64□□□□□ -0.07
BRPF3-206ENST00000449261 EIF3AQ14152 1382 aaKnown RBP14.64□□□□□ -0.07
BRPF3-206ENST00000449261 HSP90AA2PQ14568 343 aaPredicted RBP14.64□□□□□ -0.07
BRPF3-206ENST00000449261 RTF1Q92541 710 aaKnown RBP14.63□□□□□ -0.07
BRPF3-206ENST00000449261 PTMSP20962 102 aa14.63□□□□□ -0.07
BRPF3-206ENST00000449261 OS9Q13438 667 aaPredicted RBP14.63□□□□□ -0.07
BRPF3-206ENST00000449261 NPHP1O15259 732 aa14.62□□□□□ -0.07
BRPF3-206ENST00000449261 TERF2IPQ9NYB0 399 aa14.61□□□□□ -0.07
BRPF3-206ENST00000449261 AMER1Q5JTC6 1135 aaPredicted RBP14.61□□□□□ -0.07
BRPF3-206ENST00000449261 AQRO60306 1485 aaKnown RBP eCLIP14.61□□□□□ -0.076e-9■■■■■ 37.6
BRPF3-206ENST00000449261 TRAK1Q9UPV9 953 aa14.6□□□□□ -0.07
BRPF3-206ENST00000449261 TRIM44Q96DX7 344 aaPredicted RBP14.6□□□□□ -0.07
BRPF3-206ENST00000449261 CCDC144AA2RUR9 1427 aa14.6□□□□□ -0.07
BRPF3-206ENST00000449261 DHX57Q6P158 1386 aaKnown RBP14.59□□□□□ -0.07
BRPF3-206ENST00000449261 GOLGA6L22H0YM25 854 aa14.58□□□□□ -0.07
BRPF3-206ENST00000449261 ST20-MTHFSA0A0A6YYL1 179 aa14.57□□□□□ -0.08
BRPF3-206ENST00000449261 CSB-PGBD3P0DP91 1061 aa14.57□□□□□ -0.08
BRPF3-206ENST00000449261 NGDNQ8NEJ9 315 aaKnown RBP14.56□□□□□ -0.08
BRPF3-206ENST00000449261 NLRP13Q86W25 1043 aa14.56□□□□□ -0.08
BRPF3-206ENST00000449261 NUTM2FA1L443 756 aa14.55□□□□□ -0.08
BRPF3-206ENST00000449261 RBM19Q9Y4C8 960 aaKnown RBP14.55□□□□□ -0.08
BRPF3-206ENST00000449261 CALD1Q05682 793 aaKnown RBP14.55□□□□□ -0.08
BRPF3-206ENST00000449261 BRD2P25440 801 aaKnown RBP14.54□□□□□ -0.08
BRPF3-206ENST00000449261 BCL11BQ9C0K0 894 aaPredicted RBP14.54□□□□□ -0.08
BRPF3-206ENST00000449261 IPO8O15397 1037 aaKnown RBP14.54□□□□□ -0.08
BRPF3-206ENST00000449261 VGFO15240 615 aaPredicted RBP14.53□□□□□ -0.08
BRPF3-206ENST00000449261 ZMYND15Q9H091 742 aa14.53□□□□□ -0.08
BRPF3-206ENST00000449261 ZNF644Q9H582 1327 aaPredicted RBP14.53□□□□□ -0.08
BRPF3-206ENST00000449261 RCAN3Q9UKA8 241 aa14.53□□□□□ -0.08
BRPF3-206ENST00000449261 MYOM3Q5VTT5 1437 aa14.53□□□□□ -0.08
BRPF3-206ENST00000449261 KCNJ4P48050 445 aa14.51□□□□□ -0.09
BRPF3-206ENST00000449261 CFTRP13569 1480 aa14.51□□□□□ -0.09
BRPF3-206ENST00000449261 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.5□□□□□ -0.09
BRPF3-206ENST00000449261 FAM69CQ0P6D2 419 aa14.5□□□□□ -0.09
BRPF3-206ENST00000449261 UACAQ9BZF9 1416 aa14.5□□□□□ -0.09
BRPF3-206ENST00000449261 FGD1P98174 961 aa14.49□□□□□ -0.09
BRPF3-206ENST00000449261 GRIN2BQ13224 1484 aa14.49□□□□□ -0.09
BRPF3-206ENST00000449261 FGD6Q6ZV73 1430 aa14.49□□□□□ -0.09
BRPF3-206ENST00000449261 PANK3Q9H999 370 aa14.49□□□□□ -0.09
BRPF3-206ENST00000449261 GOLGA2Q08379 1002 aa14.48□□□□□ -0.09
BRPF3-206ENST00000449261 AMPHP49418 695 aa14.48□□□□□ -0.09
BRPF3-206ENST00000449261 NESP48681 1621 aa14.48□□□□□ -0.09
BRPF3-206ENST00000449261 CCDC146Q8IYE0 955 aa14.48□□□□□ -0.09
BRPF3-206ENST00000449261 NOP58Q9Y2X3 529 aaKnown RBP14.48□□□□□ -0.09
BRPF3-206ENST00000449261 KIF15Q9NS87 1388 aa14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms