RNA–Protein interactions for RNA: ENST00000449131.6

BEST1-202, Transcript of bestrophin 1, humanhuman

TSL 1 (best) BASIC

Gene BEST1, Length 4,267 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-202ENST00000449131 TOP2BQ02880 1626 aa9.39□□□□□ -0.91
BEST1-202ENST00000449131 NOP58Q9Y2X3 529 aaKnown RBP9.39□□□□□ -0.91
BEST1-202ENST00000449131 TNNT2P45379 298 aaPredicted RBP9.37□□□□□ -0.91
BEST1-202ENST00000449131 TMF1P82094 1093 aa9.37□□□□□ -0.91
BEST1-202ENST00000449131 CFAP53Q96M91 514 aa9.36□□□□□ -0.91
BEST1-202ENST00000449131 NUP155O75694 1391 aa9.36□□□□□ -0.91
BEST1-202ENST00000449131 RGS3P49796 1198 aa9.36□□□□□ -0.91
BEST1-202ENST00000449131 PLCB2Q00722 1185 aa9.36□□□□□ -0.91
BEST1-202ENST00000449131 AQRO60306 1485 aaKnown RBP eCLIP9.36□□□□□ -0.91
BEST1-202ENST00000449131 KLHL34Q8N239 644 aa9.35□□□□□ -0.91
BEST1-202ENST00000449131 PPM1GO15355 546 aaPredicted RBP9.34□□□□□ -0.91
BEST1-202ENST00000449131 DDRGK1Q96HY6 314 aa9.34□□□□□ -0.91
BEST1-202ENST00000449131 KIF21BO75037 1637 aa9.33□□□□□ -0.92
BEST1-202ENST00000449131 CARMIL2Q6F5E8 1435 aa9.33□□□□□ -0.92
BEST1-202ENST00000449131 FRAT1Q92837 279 aaPredicted RBP9.33□□□□□ -0.92
BEST1-202ENST00000449131 POLA1P09884 1462 aaPredicted RBP9.33□□□□□ -0.92
BEST1-202ENST00000449131 ADRA2BP18089 450 aa9.33□□□□□ -0.92
BEST1-202ENST00000449131 ARAP1Q96P48 1450 aa9.33□□□□□ -0.92
BEST1-202ENST00000449131 ANKRD30AQ9BXX3 1397 aa9.33□□□□□ -0.92
BEST1-202ENST00000449131 PRXQ9BXM0 1461 aa9.32□□□□□ -0.92
BEST1-202ENST00000449131 HNRNPMP52272 730 aaKnown RBP eCLIP9.32□□□□□ -0.92
BEST1-202ENST00000449131 TOPBP1Q92547 1522 aa9.32□□□□□ -0.92
BEST1-202ENST00000449131 ANP32BQ92688 251 aaKnown RBP9.31□□□□□ -0.92
BEST1-202ENST00000449131 MYH16Q9H6N6 1097 aa9.31□□□□□ -0.92
BEST1-202ENST00000449131 BECN1Q14457 450 aa9.3□□□□□ -0.92
BEST1-202ENST00000449131 ROCK2O75116 1388 aaKnown RBP9.3□□□□□ -0.92
BEST1-202ENST00000449131 FTSJ3Q8IY81 847 aaKnown RBP9.3□□□□□ -0.92
BEST1-202ENST00000449131 JPH4Q96JJ6 628 aa9.3□□□□□ -0.92
BEST1-202ENST00000449131 POGKQ9P215 609 aa9.3□□□□□ -0.92
BEST1-202ENST00000449131 KTN1Q86UP2 1357 aaKnown RBP9.3□□□□□ -0.92
BEST1-202ENST00000449131 PHLDB1Q86UU1 1377 aa9.3□□□□□ -0.92
BEST1-202ENST00000449131 PLEKHG5O94827 1062 aa9.29□□□□□ -0.92
BEST1-202ENST00000449131 ERICH6BQ5W0A0 696 aa9.29□□□□□ -0.92
BEST1-202ENST00000449131 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.29□□□□□ -0.92
BEST1-202ENST00000449131 GAPVD1Q14C86 1478 aa9.29□□□□□ -0.92
BEST1-202ENST00000449131 U2SURPO15042 1029 aaKnown RBP9.29□□□□□ -0.92
BEST1-202ENST00000449131 CCDC18Q5T9S5 1454 aa9.29□□□□□ -0.92
BEST1-202ENST00000449131 NUDCQ9Y266 331 aa9.28□□□□□ -0.92
BEST1-202ENST00000449131 RALBP1Q15311 655 aa9.28□□□□□ -0.92
BEST1-202ENST00000449131 MAPK8IP3Q9UPT6 1336 aa9.28□□□□□ -0.92
BEST1-202ENST00000449131 RCAN3Q9UKA8 241 aa9.28□□□□□ -0.92
BEST1-202ENST00000449131 GGT6Q6P531 493 aa9.28□□□□□ -0.92
BEST1-202ENST00000449131 KANK1Q14678 1352 aa9.27□□□□□ -0.93
BEST1-202ENST00000449131 SAFB2Q14151 953 aaKnown RBP eCLIP9.27□□□□□ -0.93
BEST1-202ENST00000449131 EFCAB2Q5VUJ9 269 aa9.27□□□□□ -0.93
BEST1-202ENST00000449131 PRKRIP1Q9H875 184 aaPredicted RBP9.27□□□□□ -0.93
BEST1-202ENST00000449131 ST20-MTHFSA0A0A6YYL1 179 aa9.26□□□□□ -0.93
BEST1-202ENST00000449131 SLC4A3P48751 1232 aa9.26□□□□□ -0.93
BEST1-202ENST00000449131 CCDC184Q52MB2 194 aa9.26□□□□□ -0.93
BEST1-202ENST00000449131 URB2Q14146 1524 aaKnown RBP9.26□□□□□ -0.93
BEST1-202ENST00000449131 MORC1Q86VD1 984 aa9.26□□□□□ -0.93
BEST1-202ENST00000449131 PLIN1O60240 522 aa9.25□□□□□ -0.93
BEST1-202ENST00000449131 ZBTB7CA1YPR0 619 aa9.25□□□□□ -0.93
BEST1-202ENST00000449131 SPRYD3Q8NCJ5 442 aa9.25□□□□□ -0.93
BEST1-202ENST00000449131 LRRC9Q6ZRR7 1453 aa9.24□□□□□ -0.93
BEST1-202ENST00000449131 ARID4BQ4LE39 1312 aaPredicted RBP9.24□□□□□ -0.93
BEST1-202ENST00000449131 FGD6Q6ZV73 1430 aa9.24□□□□□ -0.93
BEST1-202ENST00000449131 SRPK2P78362 688 aaKnown RBP9.24□□□□□ -0.93
BEST1-202ENST00000449131 NLRP13Q86W25 1043 aa9.24□□□□□ -0.93
BEST1-202ENST00000449131 ZNF644Q9H582 1327 aaPredicted RBP9.24□□□□□ -0.93
BEST1-202ENST00000449131 BIVM-ERCC5R4GMW8 1640 aa9.23□□□□□ -0.93
BEST1-202ENST00000449131 KIF3BO15066 747 aa9.23□□□□□ -0.93
BEST1-202ENST00000449131 STK26Q9P289 416 aa9.22□□□□□ -0.93
BEST1-202ENST00000449131 RSPH4AQ5TD94 716 aa9.22□□□□□ -0.93
BEST1-202ENST00000449131 ANO8Q9HCE9 1232 aaPredicted RBP9.22□□□□□ -0.93
BEST1-202ENST00000449131 DNMBPQ6XZF7 1577 aa9.21□□□□□ -0.93
BEST1-202ENST00000449131 MYOM3Q5VTT5 1437 aa9.21□□□□□ -0.94
BEST1-202ENST00000449131 MLECQ14165 292 aa9.21□□□□□ -0.94
BEST1-202ENST00000449131 RRBP1Q9P2E9 1410 aaKnown RBP9.21□□□□□ -0.94
BEST1-202ENST00000449131 ERICH3Q5RHP9 1530 aa9.21□□□□□ -0.94
BEST1-202ENST00000449131 EXOC6Q8TAG9 804 aa9.2□□□□□ -0.94
BEST1-202ENST00000449131 ZNF608Q9ULD9 1512 aaPredicted RBP9.2□□□□□ -0.94
BEST1-202ENST00000449131 USP47Q96K76 1375 aa9.2□□□□□ -0.94
BEST1-202ENST00000449131 MSH5O43196 834 aa9.19□□□□□ -0.94
BEST1-202ENST00000449131 UACAQ9BZF9 1416 aa9.19□□□□□ -0.94
BEST1-202ENST00000449131 SPAG9O60271 1321 aaKnown RBP9.19□□□□□ -0.94
BEST1-202ENST00000449131 PAK3O75914 559 aaPredicted RBP9.19□□□□□ -0.94
BEST1-202ENST00000449131 IPO9Q96P70 1041 aaKnown RBP9.19□□□□□ -0.94
BEST1-202ENST00000449131 ARID3AQ99856 593 aa9.19□□□□□ -0.94
BEST1-202ENST00000449131 WASHC2AQ641Q2 1341 aa9.19□□□□□ -0.94
BEST1-202ENST00000449131 TCERG1O14776 1098 aaKnown RBP9.19□□□□□ -0.94
BEST1-202ENST00000449131 MS4A1P11836 297 aa9.19□□□□□ -0.94
BEST1-202ENST00000449131 PANK3Q9H999 370 aa9.19□□□□□ -0.94
BEST1-202ENST00000449131 U2AF1L5P0DN76 240 aaPredicted RBP9.19□□□□□ -0.94
BEST1-202ENST00000449131 U2AF1Q01081 240 aaKnown RBP eCLIP9.19□□□□□ -0.94
BEST1-202ENST00000449131 CCDC146Q8IYE0 955 aa9.19□□□□□ -0.94
BEST1-202ENST00000449131 KIF15Q9NS87 1388 aa9.18□□□□□ -0.94
BEST1-202ENST00000449131 MYBBP1AQ9BQG0 1328 aaKnown RBP9.18□□□□□ -0.94
BEST1-202ENST00000449131 ZBED9Q6R2W3 1325 aa9.18□□□□□ -0.94
BEST1-202ENST00000449131 GOLGA2Q08379 1002 aa9.18□□□□□ -0.94
BEST1-202ENST00000449131 CASKIN1Q8WXD9 1431 aa9.18□□□□□ -0.94
BEST1-202ENST00000449131 SLKQ9H2G2 1235 aaPredicted RBP9.18□□□□□ -0.94
BEST1-202ENST00000449131 LAMC3Q9Y6N6 1575 aa9.18□□□□□ -0.94
BEST1-202ENST00000449131 ABCA10Q8WWZ4 1543 aa9.18□□□□□ -0.94
BEST1-202ENST00000449131 PDE3BQ13370 1112 aa9.17□□□□□ -0.94
BEST1-202ENST00000449131 SOX12O15370 315 aa9.17□□□□□ -0.94
BEST1-202ENST00000449131 CCDC144AA2RUR9 1427 aa9.17□□□□□ -0.94
BEST1-202ENST00000449131 NCOA2Q15596 1464 aa9.16□□□□□ -0.94
BEST1-202ENST00000449131 GOLGA6L22H0YM25 854 aa9.16□□□□□ -0.94
BEST1-202ENST00000449131 NCLP19338 710 aaKnown RBP9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms