RNA–Protein interactions for RNA: ENST00000448935.6

VIPAS39-203, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 2 BASIC

Gene VIPAS39, Length 1,623 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-203ENST00000448935 TROQ12816 1431 aaPredicted RBP15.66■□□□□ 0.1
VIPAS39-203ENST00000448935 TCOF1Q13428 1488 aaKnown RBP15.66■□□□□ 0.1
VIPAS39-203ENST00000448935 ADCY10Q96PN6 1610 aa15.66■□□□□ 0.1
VIPAS39-203ENST00000448935 SETD5Q9C0A6 1442 aa15.66■□□□□ 0.1
VIPAS39-203ENST00000448935 DHX57Q6P158 1386 aaKnown RBP15.63■□□□□ 0.09
VIPAS39-203ENST00000448935 ITSN2Q9NZM3 1697 aa15.62■□□□□ 0.09
VIPAS39-203ENST00000448935 RAB3GAP2Q9H2M9 1393 aa15.62■□□□□ 0.09
VIPAS39-203ENST00000448935 ARID3CA6NKF2 412 aa15.61■□□□□ 0.09
VIPAS39-203ENST00000448935 UACAQ9BZF9 1416 aa15.59■□□□□ 0.09
VIPAS39-203ENST00000448935 PLEKHD1A6NEE1 506 aa15.59■□□□□ 0.09
VIPAS39-203ENST00000448935 ATP10BO94823 1461 aa15.59■□□□□ 0.09
VIPAS39-203ENST00000448935 KIF14Q15058 1648 aa15.58■□□□□ 0.08
VIPAS39-203ENST00000448935 HFM1A2PYH4 1435 aa15.56■□□□□ 0.08
VIPAS39-203ENST00000448935 ABCC2Q92887 1545 aa15.55■□□□□ 0.08
VIPAS39-203ENST00000448935 AKNAQ7Z591 1439 aa15.54■□□□□ 0.08
VIPAS39-203ENST00000448935 ERCC6L2Q5T890 1561 aa15.52■□□□□ 0.08
VIPAS39-203ENST00000448935 ACIN1Q9UKV3 1341 aaKnown RBP15.52■□□□□ 0.08
VIPAS39-203ENST00000448935 GCC2Q8IWJ2 1684 aa15.52■□□□□ 0.07
VIPAS39-203ENST00000448935 PTPRKQ15262 1439 aa15.51■□□□□ 0.07
VIPAS39-203ENST00000448935 DNMT1P26358 1616 aaKnown RBP15.51■□□□□ 0.07
VIPAS39-203ENST00000448935 UHRF1BP1LA0JNW5 1464 aa15.51■□□□□ 0.07
VIPAS39-203ENST00000448935 GPATCH8Q9UKJ3 1502 aaKnown RBP15.5■□□□□ 0.07
VIPAS39-203ENST00000448935 CFDP1Q9UEE9 299 aaPredicted RBP15.49■□□□□ 0.07
VIPAS39-203ENST00000448935 NAIPQ13075 1403 aa15.49■□□□□ 0.07
VIPAS39-203ENST00000448935 CDC42BPAQ5VT25 1732 aa15.48■□□□□ 0.07
VIPAS39-203ENST00000448935 ABCC10Q5T3U5 1492 aa15.48■□□□□ 0.07
VIPAS39-203ENST00000448935 DAPK1P53355 1430 aa15.48■□□□□ 0.07
VIPAS39-203ENST00000448935 ROCK1Q13464 1354 aa15.48■□□□□ 0.07
VIPAS39-203ENST00000448935 CAMSAP2Q08AD1 1489 aa15.47■□□□□ 0.07
VIPAS39-203ENST00000448935 MAPKBP1O60336 1514 aa15.44■□□□□ 0.06
VIPAS39-203ENST00000448935 OSCARQ8IYS5 282 aa15.44■□□□□ 0.06
VIPAS39-203ENST00000448935 KDM5BQ9UGL1 1544 aa15.44■□□□□ 0.06
VIPAS39-203ENST00000448935 ZCCHC11Q5TAX3 1644 aaKnown RBP15.43■□□□□ 0.06
VIPAS39-203ENST00000448935 ADGBQ8N7X0 1667 aa15.43■□□□□ 0.06
VIPAS39-203ENST00000448935 ABCC5O15440 1437 aa15.43■□□□□ 0.06
VIPAS39-203ENST00000448935 CROCC2H7BZ55 1655 aa15.43■□□□□ 0.06
VIPAS39-203ENST00000448935 PREX2Q70Z35 1606 aa15.42■□□□□ 0.06
VIPAS39-203ENST00000448935 CHIC2Q9UKJ5 165 aa15.4■□□□□ 0.06
VIPAS39-203ENST00000448935 ZNF644Q9H582 1327 aaPredicted RBP15.39■□□□□ 0.05
VIPAS39-203ENST00000448935 RRP7BPQ9NSQ0 103 aa15.39■□□□□ 0.05
VIPAS39-203ENST00000448935 TIMELESSQ9UNS1 1208 aa15.39■□□□□ 0.05
VIPAS39-203ENST00000448935 MYO5CQ9NQX4 1742 aa15.39■□□□□ 0.05
VIPAS39-203ENST00000448935 ADGRL2O95490 1459 aa15.38■□□□□ 0.05
VIPAS39-203ENST00000448935 SHANK2Q9UPX8 1470 aa15.38■□□□□ 0.05
VIPAS39-203ENST00000448935 CDC42BPBQ9Y5S2 1711 aa15.38■□□□□ 0.05
VIPAS39-203ENST00000448935 ARHGEF5Q12774 1597 aa15.37■□□□□ 0.05
VIPAS39-203ENST00000448935 ZNF777Q9ULD5 760 aaPredicted RBP15.37■□□□□ 0.05
VIPAS39-203ENST00000448935 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.36■□□□□ 0.05
VIPAS39-203ENST00000448935 RSPH4AQ5TD94 716 aa15.36■□□□□ 0.05
VIPAS39-203ENST00000448935 TTC37Q6PGP7 1564 aa15.35■□□□□ 0.05
VIPAS39-203ENST00000448935 ANKRD30AQ9BXX3 1397 aa15.34■□□□□ 0.05
VIPAS39-203ENST00000448935 PLEKHH2Q8IVE3 1493 aa15.34■□□□□ 0.05
VIPAS39-203ENST00000448935 ZNF316A6NFI3 1004 aaPredicted RBP15.34■□□□□ 0.05
VIPAS39-203ENST00000448935 NCOA1Q15788 1441 aa15.33■□□□□ 0.04
VIPAS39-203ENST00000448935 ARHGAP5Q13017 1502 aa15.32■□□□□ 0.04
VIPAS39-203ENST00000448935 SAMD9LQ8IVG5 1584 aa15.32■□□□□ 0.04
VIPAS39-203ENST00000448935 TSPY4P0CV99 314 aa15.32■□□□□ 0.04
VIPAS39-203ENST00000448935 TSPY10P0CW01 314 aa15.32■□□□□ 0.04
VIPAS39-203ENST00000448935 ATF5Q9Y2D1 282 aaPredicted RBP15.32■□□□□ 0.04
VIPAS39-203ENST00000448935 KDM6BO15054 1643 aa15.31■□□□□ 0.04
VIPAS39-203ENST00000448935 CCDC141Q6ZP82 1450 aa15.31■□□□□ 0.04
VIPAS39-203ENST00000448935 TRIM52Q96A61 297 aa15.3■□□□□ 0.04
VIPAS39-203ENST00000448935 ARAP3Q8WWN8 1544 aa15.3■□□□□ 0.04
VIPAS39-203ENST00000448935 C9orf84Q5VXU9 1444 aa15.3■□□□□ 0.04
VIPAS39-203ENST00000448935 MBD5Q9P267 1494 aa15.29■□□□□ 0.04
VIPAS39-203ENST00000448935 WDR7Q9Y4E6 1490 aa15.29■□□□□ 0.04
VIPAS39-203ENST00000448935 PLCH2O75038 1416 aa15.28■□□□□ 0.04
VIPAS39-203ENST00000448935 KIAA1107Q9UPP5 1409 aa15.28■□□□□ 0.04
VIPAS39-203ENST00000448935 KCNH8Q96L42 1107 aa15.28■□□□□ 0.04
VIPAS39-203ENST00000448935 MAST1Q9Y2H9 1570 aa15.27■□□□□ 0.03
VIPAS39-203ENST00000448935 NEUROD1Q13562 356 aa15.25■□□□□ 0.03
VIPAS39-203ENST00000448935 EFCAB2Q5VUJ9 269 aa15.25■□□□□ 0.03
VIPAS39-203ENST00000448935 SYCP2Q9BX26 1530 aa15.25■□□□□ 0.03
VIPAS39-203ENST00000448935 NPM1P06748 294 aaKnown RBP eCLIP15.25■□□□□ 0.03
VIPAS39-203ENST00000448935 SIN3AQ96ST3 1273 aa15.25■□□□□ 0.03
VIPAS39-203ENST00000448935 MPHOSPH9Q99550 1183 aa15.25■□□□□ 0.03
VIPAS39-203ENST00000448935 ANKRD50Q9ULJ7 1429 aa15.24■□□□□ 0.03
VIPAS39-203ENST00000448935 HNRNPMP52272 730 aaKnown RBP eCLIP15.24■□□□□ 0.03
VIPAS39-203ENST00000448935 SAMD1Q6SPF0 538 aaPredicted RBP15.24■□□□□ 0.03
VIPAS39-203ENST00000448935 ABCA9Q8IUA7 1624 aa15.24■□□□□ 0.03
VIPAS39-203ENST00000448935 TONSLQ96HA7 1378 aa15.23■□□□□ 0.03
VIPAS39-203ENST00000448935 DIEXFQ68CQ4 756 aaKnown RBP15.22■□□□□ 0.03
VIPAS39-203ENST00000448935 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.21■□□□□ 0.034e-6■■■■□ 19.8
VIPAS39-203ENST00000448935 PLXNC1O60486 1568 aa15.21■□□□□ 0.02
VIPAS39-203ENST00000448935 ABCC1P33527 1531 aa15.21■□□□□ 0.02
VIPAS39-203ENST00000448935 ASXL2Q76L83 1435 aa15.21■□□□□ 0.02
VIPAS39-203ENST00000448935 DENND4BO75064 1496 aaPredicted RBP15.2■□□□□ 0.02
VIPAS39-203ENST00000448935 KIF15Q9NS87 1388 aa15.2■□□□□ 0.02
VIPAS39-203ENST00000448935 KDM5DQ9BY66 1539 aa15.18■□□□□ 0.02
VIPAS39-203ENST00000448935 DCAF8L1A6NGE4 600 aa15.17■□□□□ 0.02
VIPAS39-203ENST00000448935 PPP1R15AO75807 674 aaPredicted RBP15.17■□□□□ 0.02
VIPAS39-203ENST00000448935 PZPP20742 1482 aa15.17■□□□□ 0.02
VIPAS39-203ENST00000448935 ANKRD30BQ9BXX2 1392 aa15.14■□□□□ 0.01
VIPAS39-203ENST00000448935 DUOX2Q9NRD8 1548 aa15.14■□□□□ 0.01
VIPAS39-203ENST00000448935 FANCAO15360 1455 aa15.14■□□□□ 0.01
VIPAS39-203ENST00000448935 CFAP74Q9C0B2 1584 aa15.14■□□□□ 0.01
VIPAS39-203ENST00000448935 ARHGEF12Q9NZN5 1544 aa15.13■□□□□ 0.01
VIPAS39-203ENST00000448935 RTEL1-TNFRSF6BF6WH68 1400 aa15.13■□□□□ 0.01
VIPAS39-203ENST00000448935 CYB5RLQ6IPT4 315 aa15.13■□□□□ 0.01
VIPAS39-203ENST00000448935 RPRD2Q5VT52 1461 aaKnown RBP15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms