RNA–Protein interactions for RNA: ENST00000448770.5

POLR1B-209, Transcript of RNA polymerase I subunit B, humanhuman

TSL 1 (best)

Gene POLR1B, Length 2,494 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1B-209ENST00000448770 MIA2Q96PC5 1412 aa19.01■□□□□ 0.63
POLR1B-209ENST00000448770 NCOA1Q15788 1441 aa19.01■□□□□ 0.63
POLR1B-209ENST00000448770 TEX14Q8IWB6 1497 aa19■□□□□ 0.63
POLR1B-209ENST00000448770 MSH5O43196 834 aa18.99■□□□□ 0.63
POLR1B-209ENST00000448770 CCDC7Q96M83 1385 aa18.99■□□□□ 0.63
POLR1B-209ENST00000448770 ZNF644Q9H582 1327 aaPredicted RBP18.98■□□□□ 0.63
POLR1B-209ENST00000448770 ANKRD30BQ9BXX2 1392 aa18.98■□□□□ 0.63
POLR1B-209ENST00000448770 ERCC6Q03468 1493 aa18.97■□□□□ 0.63
POLR1B-209ENST00000448770 DAPK1P53355 1430 aa18.97■□□□□ 0.63
POLR1B-209ENST00000448770 ABCC5O15440 1437 aa18.96■□□□□ 0.63
POLR1B-209ENST00000448770 RPRD2Q5VT52 1461 aaKnown RBP18.96■□□□□ 0.63
POLR1B-209ENST00000448770 PRKRIP1Q9H875 184 aaPredicted RBP18.95■□□□□ 0.62
POLR1B-209ENST00000448770 DNMT1P26358 1616 aaKnown RBP18.94■□□□□ 0.62
POLR1B-209ENST00000448770 SPATA31E1Q6ZUB1 1445 aa18.93■□□□□ 0.62
POLR1B-209ENST00000448770 NUP153P49790 1475 aaKnown RBP18.91■□□□□ 0.62
POLR1B-209ENST00000448770 DISP1Q96F81 1524 aa18.91■□□□□ 0.62
POLR1B-209ENST00000448770 KIF7Q2M1P5 1343 aa18.91■□□□□ 0.62
POLR1B-209ENST00000448770 ROCK1Q13464 1354 aa18.9■□□□□ 0.62
POLR1B-209ENST00000448770 FAM9BQ8IZU0 186 aa18.9■□□□□ 0.62
POLR1B-209ENST00000448770 ZNF608Q9ULD9 1512 aaPredicted RBP18.89■□□□□ 0.62
POLR1B-209ENST00000448770 KIAA0556O60303 1618 aa18.88■□□□□ 0.61
POLR1B-209ENST00000448770 IFT140Q96RY7 1462 aa18.88■□□□□ 0.61
POLR1B-209ENST00000448770 PZPP20742 1482 aa18.87■□□□□ 0.61
POLR1B-209ENST00000448770 MRS2Q9HD23 443 aa18.87■□□□□ 0.61
POLR1B-209ENST00000448770 POLR1AO95602 1720 aaPredicted RBP18.85■□□□□ 0.61
POLR1B-209ENST00000448770 SLC4A1APQ9BWU0 796 aaKnown RBP18.85■□□□□ 0.61
POLR1B-209ENST00000448770 RAPGEF6Q8TEU7 1601 aa18.82■□□□□ 0.6
POLR1B-209ENST00000448770 ZBED9Q6R2W3 1325 aa18.82■□□□□ 0.6
POLR1B-209ENST00000448770 BCORL1Q5H9F3 1711 aa18.82■□□□□ 0.6
POLR1B-209ENST00000448770 MBD5Q9P267 1494 aa18.82■□□□□ 0.6
POLR1B-209ENST00000448770 PRG4Q92954 1404 aaPredicted RBP18.82■□□□□ 0.6
POLR1B-209ENST00000448770 CDK11AQ9UQ88 783 aaPredicted RBP18.8■□□□□ 0.6
POLR1B-209ENST00000448770 DHX29Q7Z478 1369 aaKnown RBP18.8■□□□□ 0.6
POLR1B-209ENST00000448770 KIAA0586Q9BVV6 1533 aa18.8■□□□□ 0.6
POLR1B-209ENST00000448770 B4GALNT3Q6L9W6 998 aa18.79■□□□□ 0.6
POLR1B-209ENST00000448770 PPP4R2Q9NY27 417 aa18.79■□□□□ 0.6
POLR1B-209ENST00000448770 FANCIQ9NVI1 1328 aa18.79■□□□□ 0.6
POLR1B-209ENST00000448770 CAMSAP2Q08AD1 1489 aa18.79■□□□□ 0.6
POLR1B-209ENST00000448770 KIF14Q15058 1648 aa18.77■□□□□ 0.6
POLR1B-209ENST00000448770 CNGB1Q14028 1251 aaPredicted RBP18.77■□□□□ 0.59
POLR1B-209ENST00000448770 ERICH6BQ5W0A0 696 aa18.75■□□□□ 0.59
POLR1B-209ENST00000448770 EIF4G3O43432 1585 aaKnown RBP18.75■□□□□ 0.59
POLR1B-209ENST00000448770 PLB1Q6P1J6 1458 aa18.74■□□□□ 0.59
POLR1B-209ENST00000448770 SENP3-EIF4A1A0A087X0R7 540 aa18.74■□□□□ 0.59
POLR1B-209ENST00000448770 GPATCH8Q9UKJ3 1502 aaKnown RBP18.74■□□□□ 0.59
POLR1B-209ENST00000448770 GRIN2AQ12879 1464 aa18.73■□□□□ 0.59
POLR1B-209ENST00000448770 TROQ12816 1431 aaPredicted RBP18.73■□□□□ 0.59
POLR1B-209ENST00000448770 ADGBQ8N7X0 1667 aa18.72■□□□□ 0.59
POLR1B-209ENST00000448770 USP47Q96K76 1375 aa18.72■□□□□ 0.59
POLR1B-209ENST00000448770 CROCC2H7BZ55 1655 aa18.72■□□□□ 0.59
POLR1B-209ENST00000448770 KIAA1107Q9UPP5 1409 aa18.71■□□□□ 0.59
POLR1B-209ENST00000448770 KDM5CP41229 1560 aa18.71■□□□□ 0.59
POLR1B-209ENST00000448770 ZNF326Q5BKZ1 582 aaKnown RBP18.71■□□□□ 0.59
POLR1B-209ENST00000448770 BCL11AQ9H165 835 aa18.71■□□□□ 0.58
POLR1B-209ENST00000448770 CFDP1Q9UEE9 299 aaPredicted RBP18.7■□□□□ 0.58
POLR1B-209ENST00000448770 ADGRL2O95490 1459 aa18.7■□□□□ 0.58
POLR1B-209ENST00000448770 ZNF777Q9ULD5 760 aaPredicted RBP18.69■□□□□ 0.58
POLR1B-209ENST00000448770 PKD2Q13563 968 aa18.68■□□□□ 0.58
POLR1B-209ENST00000448770 POLR3GLQ9BT43 218 aa18.68■□□□□ 0.58
POLR1B-209ENST00000448770 ITSN2Q9NZM3 1697 aa18.68■□□□□ 0.58
POLR1B-209ENST00000448770 CEP170Q5SW79 1584 aa18.67■□□□□ 0.58
POLR1B-209ENST00000448770 ADCY10Q96PN6 1610 aa18.67■□□□□ 0.58
POLR1B-209ENST00000448770 SMG6Q86US8 1419 aaKnown RBP18.66■□□□□ 0.58
POLR1B-209ENST00000448770 ANKRD50Q9ULJ7 1429 aa18.62■□□□□ 0.57
POLR1B-209ENST00000448770 CDC42BPAQ5VT25 1732 aa18.62■□□□□ 0.57
POLR1B-209ENST00000448770 RNF123Q5XPI4 1314 aa18.61■□□□□ 0.57
POLR1B-209ENST00000448770 RALGAPBQ86X10 1494 aa18.6■□□□□ 0.57
POLR1B-209ENST00000448770 MAGI1Q96QZ7 1491 aaPredicted RBP18.6■□□□□ 0.57
POLR1B-209ENST00000448770 NUDCQ9Y266 331 aa18.6■□□□□ 0.57
POLR1B-209ENST00000448770 UHRF1BP1Q6BDS2 1440 aa18.6■□□□□ 0.57
POLR1B-209ENST00000448770 ANKRD30AQ9BXX3 1397 aa18.59■□□□□ 0.57
POLR1B-209ENST00000448770 PNISRQ8TF01 805 aaKnown RBP18.59■□□□□ 0.57
POLR1B-209ENST00000448770 ABCC10Q5T3U5 1492 aa18.56■□□□□ 0.56
POLR1B-209ENST00000448770 NUP155O75694 1391 aa18.56■□□□□ 0.56
POLR1B-209ENST00000448770 C9orf84Q5VXU9 1444 aa18.55■□□□□ 0.56
POLR1B-209ENST00000448770 CARD11Q9BXL7 1154 aa18.54■□□□□ 0.56
POLR1B-209ENST00000448770 ERICH6Q7L0X2 663 aa18.53■□□□□ 0.56
POLR1B-209ENST00000448770 ST20-MTHFSA0A0A6YYL1 179 aa18.52■□□□□ 0.56
POLR1B-209ENST00000448770 SYNJ2O15056 1496 aa18.52■□□□□ 0.56
POLR1B-209ENST00000448770 ABCA8O94911 1581 aa18.52■□□□□ 0.56
POLR1B-209ENST00000448770 KDM5DQ9BY66 1539 aa18.52■□□□□ 0.56
POLR1B-209ENST00000448770 ARHGEF12Q9NZN5 1544 aa18.52■□□□□ 0.56
POLR1B-209ENST00000448770 KDM2AQ9Y2K7 1162 aa18.52■□□□□ 0.56
POLR1B-209ENST00000448770 E9PCH4 1651 aa18.52■□□□□ 0.55
POLR1B-209ENST00000448770 ARID4BQ4LE39 1312 aaPredicted RBP18.51■□□□□ 0.55
POLR1B-209ENST00000448770 CHMP7Q8WUX9 453 aaPredicted RBP18.51■□□□□ 0.55
POLR1B-209ENST00000448770 SHANK2Q9UPX8 1470 aa18.51■□□□□ 0.55
POLR1B-209ENST00000448770 LRPPRCP42704 1394 aaKnown RBP18.51■□□□□ 0.55
POLR1B-209ENST00000448770 ATP10BO94823 1461 aa18.51■□□□□ 0.55
POLR1B-209ENST00000448770 PAK3O75914 559 aaPredicted RBP18.5■□□□□ 0.55
POLR1B-209ENST00000448770 FBLN2P98095 1184 aa18.5■□□□□ 0.55
POLR1B-209ENST00000448770 JPH4Q96JJ6 628 aa18.49■□□□□ 0.55
POLR1B-209ENST00000448770 PTPRGP23470 1445 aa18.49■□□□□ 0.55
POLR1B-209ENST00000448770 NUP160Q12769 1436 aa18.49■□□□□ 0.55
POLR1B-209ENST00000448770 TMC1Q8TDI8 760 aa18.48■□□□□ 0.55
POLR1B-209ENST00000448770 ROCK2O75116 1388 aaKnown RBP18.48■□□□□ 0.55
POLR1B-209ENST00000448770 KIF15Q9NS87 1388 aa18.48■□□□□ 0.55
POLR1B-209ENST00000448770 HNRNPMP52272 730 aaKnown RBP eCLIP18.47■□□□□ 0.55
POLR1B-209ENST00000448770 DCAF11Q8TEB1 546 aa18.46■□□□□ 0.55
POLR1B-209ENST00000448770 CCDC136Q96JN2 1154 aa18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms